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fix_setforce_kokkos.cpp
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Wed, Nov 6, 11:36
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rLAMMPS lammps
fix_setforce_kokkos.cpp
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/* ----------------------------------------------------------------------
LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator
http://lammps.sandia.gov, Sandia National Laboratories
Steve Plimpton, sjplimp@sandia.gov
Copyright (2003) Sandia Corporation. Under the terms of Contract
DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains
certain rights in this software. This software is distributed under
the GNU General Public License.
See the README file in the top-level LAMMPS directory.
------------------------------------------------------------------------- */
#include <string.h>
#include <stdlib.h>
#include "fix_setforce_kokkos.h"
#include "atom_kokkos.h"
#include "update.h"
#include "modify.h"
#include "domain.h"
#include "region.h"
#include "respa.h"
#include "input.h"
#include "variable.h"
#include "memory.h"
#include "error.h"
#include "force.h"
#include "atom_masks.h"
using
namespace
LAMMPS_NS
;
using
namespace
FixConst
;
enum
{
NONE
,
CONSTANT
,
EQUAL
,
ATOM
};
/* ---------------------------------------------------------------------- */
template
<
class
DeviceType
>
FixSetForceKokkos
<
DeviceType
>::
FixSetForceKokkos
(
LAMMPS
*
lmp
,
int
narg
,
char
**
arg
)
:
FixSetForce
(
lmp
,
narg
,
arg
)
{
atomKK
=
(
AtomKokkos
*
)
atom
;
execution_space
=
ExecutionSpaceFromDevice
<
DeviceType
>::
space
;
datamask_read
=
EMPTY_MASK
;
datamask_modify
=
EMPTY_MASK
;
memory
->
destroy
(
sforce
);
memory
->
create_kokkos
(
k_sforce
,
sforce
,
maxatom
,
3
,
"setforce:sforce"
);
}
/* ---------------------------------------------------------------------- */
template
<
class
DeviceType
>
FixSetForceKokkos
<
DeviceType
>::~
FixSetForceKokkos
()
{
if
(
copymode
)
return
;
memory
->
destroy_kokkos
(
k_sforce
,
sforce
);
sforce
=
NULL
;
}
/* ---------------------------------------------------------------------- */
template
<
class
DeviceType
>
void
FixSetForceKokkos
<
DeviceType
>::
init
()
{
FixSetForce
::
init
();
if
(
strstr
(
update
->
integrate_style
,
"respa"
))
error
->
all
(
FLERR
,
"Cannot (yet) use respa with Kokkos"
);
}
/* ---------------------------------------------------------------------- */
template
<
class
DeviceType
>
void
FixSetForceKokkos
<
DeviceType
>::
post_force
(
int
vflag
)
{
atomKK
->
sync
(
execution_space
,
X_MASK
|
F_MASK
|
MASK_MASK
);
x
=
atomKK
->
k_x
.
view
<
DeviceType
>
();
f
=
atomKK
->
k_f
.
view
<
DeviceType
>
();
mask
=
atomKK
->
k_mask
.
view
<
DeviceType
>
();
int
nlocal
=
atom
->
nlocal
;
// update region if necessary
region
=
NULL
;
if
(
iregion
>=
0
)
{
region
=
domain
->
regions
[
iregion
];
region
->
prematch
();
d_match
=
DAT
::
t_int_1d
(
"setforce:d_match"
,
nlocal
);
region
->
match_all_kokkos
(
groupbit
,
d_match
);
}
// reallocate sforce array if necessary
if
(
varflag
==
ATOM
&&
nlocal
>
maxatom
)
{
maxatom
=
atom
->
nmax
;
memory
->
destroy_kokkos
(
k_sforce
,
sforce
);
memory
->
create_kokkos
(
k_sforce
,
sforce
,
maxatom
,
3
,
"setforce:sforce"
);
}
foriginal
[
0
]
=
foriginal
[
1
]
=
foriginal
[
2
]
=
0.0
;
double_3
foriginal_kk
;
force_flag
=
0
;
if
(
varflag
==
CONSTANT
)
{
copymode
=
1
;
Kokkos
::
parallel_reduce
(
Kokkos
::
RangePolicy
<
DeviceType
,
TagFixSetForceConstant
>
(
0
,
nlocal
),
*
this
,
foriginal_kk
);
DeviceType
::
fence
();
copymode
=
0
;
// variable force, wrap with clear/add
}
else
{
atomKK
->
sync
(
Host
,
ALL_MASK
);
// this can be removed when variable class is ported to Kokkos
modify
->
clearstep_compute
();
if
(
xstyle
==
EQUAL
)
xvalue
=
input
->
variable
->
compute_equal
(
xvar
);
else
if
(
xstyle
==
ATOM
)
input
->
variable
->
compute_atom
(
xvar
,
igroup
,
&
sforce
[
0
][
0
],
3
,
0
);
if
(
ystyle
==
EQUAL
)
yvalue
=
input
->
variable
->
compute_equal
(
yvar
);
else
if
(
ystyle
==
ATOM
)
input
->
variable
->
compute_atom
(
yvar
,
igroup
,
&
sforce
[
0
][
1
],
3
,
0
);
if
(
zstyle
==
EQUAL
)
zvalue
=
input
->
variable
->
compute_equal
(
zvar
);
else
if
(
zstyle
==
ATOM
)
input
->
variable
->
compute_atom
(
zvar
,
igroup
,
&
sforce
[
0
][
2
],
3
,
0
);
modify
->
addstep_compute
(
update
->
ntimestep
+
1
);
if
(
varflag
==
ATOM
)
{
// this can be removed when variable class is ported to Kokkos
k_sforce
.
modify
<
LMPHostType
>
();
k_sforce
.
sync
<
DeviceType
>
();
}
copymode
=
1
;
Kokkos
::
parallel_reduce
(
Kokkos
::
RangePolicy
<
DeviceType
,
TagFixSetForceNonConstant
>
(
0
,
nlocal
),
*
this
,
foriginal_kk
);
DeviceType
::
fence
();
copymode
=
0
;
}
atomKK
->
modified
(
execution_space
,
F_MASK
);
foriginal
[
0
]
=
foriginal_kk
.
d0
;
foriginal
[
1
]
=
foriginal_kk
.
d1
;
foriginal
[
2
]
=
foriginal_kk
.
d2
;
}
template
<
class
DeviceType
>
KOKKOS_INLINE_FUNCTION
void
FixSetForceKokkos
<
DeviceType
>::
operator
()(
TagFixSetForceConstant
,
const
int
&
i
,
double_3
&
foriginal_kk
)
const
{
if
(
mask
[
i
]
&
groupbit
)
{
if
(
region
&&
!
d_match
[
i
])
return
;
foriginal_kk
.
d0
+=
f
(
i
,
0
);
foriginal_kk
.
d1
+=
f
(
i
,
1
);
foriginal_kk
.
d2
+=
f
(
i
,
2
);
if
(
xstyle
)
f
(
i
,
0
)
=
xvalue
;
if
(
ystyle
)
f
(
i
,
1
)
=
yvalue
;
if
(
zstyle
)
f
(
i
,
2
)
=
zvalue
;
}
}
template
<
class
DeviceType
>
KOKKOS_INLINE_FUNCTION
void
FixSetForceKokkos
<
DeviceType
>::
operator
()(
TagFixSetForceNonConstant
,
const
int
&
i
,
double_3
&
foriginal_kk
)
const
{
if
(
mask
[
i
]
&
groupbit
)
{
if
(
region
&&
!
d_match
[
i
])
return
;
foriginal_kk
.
d0
+=
f
(
i
,
0
);
foriginal_kk
.
d1
+=
f
(
i
,
1
);
foriginal_kk
.
d2
+=
f
(
i
,
2
);
if
(
xstyle
==
ATOM
)
f
(
i
,
0
)
=
d_sforce
(
i
,
0
);
else
if
(
xstyle
)
f
(
i
,
0
)
=
xvalue
;
if
(
ystyle
==
ATOM
)
f
(
i
,
1
)
=
d_sforce
(
i
,
1
);
else
if
(
ystyle
)
f
(
i
,
1
)
=
yvalue
;
if
(
zstyle
==
ATOM
)
f
(
i
,
2
)
=
d_sforce
(
i
,
2
);
else
if
(
zstyle
)
f
(
i
,
2
)
=
zvalue
;
}
}
namespace
LAMMPS_NS
{
template
class
FixSetForceKokkos
<
LMPDeviceType
>
;
#ifdef KOKKOS_HAVE_CUDA
template
class
FixSetForceKokkos
<
LMPHostType
>
;
#endif
}
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