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python_exact_reference_plastic_test.py
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#!/usr/bin/env python3
# -*- coding:utf-8 -*-
"""
file python_exact_reference_plastic_test.py
@author Till Junge <till.junge@epfl.ch>
@date 22 Jun 2018
@brief Tests exactness of each iterate with respect to python reference
implementation from GooseFFT for plasticity
Copyright © 2018 Till Junge
µSpectre is free software; you can redistribute it and/or
modify it under the terms of the GNU General Public License as
published by the Free Software Foundation, either version 3, or (at
your option) any later version.
µSpectre is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with GNU Emacs; see the file COPYING. If not, write to the
Free Software Foundation, Inc., 59 Temple Place - Suite 330,
Boston, MA 02111-1307, USA.
"""
import unittest
import numpy as np
import numpy.linalg as linalg
from python_test_imports import µ
# turn of warning for zero division
# (which occurs in the linearization of the logarithmic strain)
np.seterr(divide='ignore', invalid='ignore')
import scipy.sparse.linalg as sp
import itertools
import sys
from python_exact_reference_elastic_test import deserialise_t4, t2_to_goose
from python_exact_reference_elastic_test import t2_vec_to_goose
from python_exact_reference_elastic_test import scalar_vec_to_goose
from python_exact_reference_elastic_test import t4_to_goose
from python_exact_reference_elastic_test import t4_vec_to_goose
from python_exact_reference_elastic_test import t2_from_goose
from python_exact_reference_elastic_test import Counter
import python_exact_reference_elastic_test as elastic_ref
from material_hyper_elasto_plastic1 import PK1_fun_3d
# ----------------------------------- GRID ------------------------------------
from python_exact_reference_elastic_test import ndim, N, Nx, Ny, Nz
shape = [Nx, Ny, Nz]
standalone_dyad22 = lambda A2,B2: np.einsum('ij ,kl ->ijkl',A2,B2)
standalone_dyad11 = lambda A1,B1: np.einsum('i ,j ->ij ',A1,B1)
standalone_dot22 = lambda A2,B2: np.einsum('ij ,jk ->ik ',A2,B2)
standalone_dot24 = lambda A2,B4: np.einsum('ij ,jkmn->ikmn',A2,B4)
standalone_dot42 = lambda A4,B2: np.einsum('ijkl,lm ->ijkm',A4,B2)
standalone_inv2 = np.linalg.inv
standalone_ddot22 = lambda A2,B2: np.einsum('ij ,ji -> ',A2,B2)
standalone_ddot42 = lambda A4,B2: np.einsum('ijkl,lk ->ij ',A4,B2)
standalone_ddot44 = lambda A4,B4: np.einsum('ijkl,lkmn->ijmn',A4,B4)
def constitutive_standalone(K, mu, H, tauy0, F,F_t,be_t,ep_t, dim):
I = np.eye(dim)
II = standalone_dyad22(I,I)
I4 = np.einsum('il,jk',I,I)
I4rt = np.einsum('ik,jl',I,I)
I4s = (I4+I4rt)/2.
def ln2(A2):
vals,vecs = np.linalg.eig(A2)
return sum(
[np.log(vals[i])*standalone_dyad11(vecs[:,i],vecs[:,i]) for i in range(dim)])
def exp2(A2):
vals,vecs = np.linalg.eig(A2)
return sum(
[np.exp(vals[i])*standalone_dyad11(vecs[:,i],vecs[:,i]) for i in range(dim)])
# function to compute linearization of the logarithmic Finger tensor
def dln2_d2(A2):
vals,vecs = np.linalg.eig(A2)
K4 = np.zeros([dim, dim, dim, dim])
for m, n in itertools.product(range(dim),repeat=2):
if vals[n]==vals[m]:
gc = (1.0/vals[m])
else:
gc = (np.log(vals[n])-np.log(vals[m]))/(vals[n]-vals[m])
K4 += gc*standalone_dyad22(standalone_dyad11(vecs[:,m],vecs[:,n]),standalone_dyad11(vecs[:,m],vecs[:,n]))
return K4
# elastic stiffness tensor
C4e = K*II+2.*mu*(I4s-1./3.*II)
# trial state
Fdelta = standalone_dot22(F,standalone_inv2(F_t))
be_s = standalone_dot22(Fdelta,standalone_dot22(be_t,Fdelta.T))
lnbe_s = ln2(be_s)
tau_s = standalone_ddot42(C4e,lnbe_s)/2.
taum_s = standalone_ddot22(tau_s,I)/3.
taud_s = tau_s-taum_s*I
taueq_s = np.sqrt(3./2.*standalone_ddot22(taud_s,taud_s))
div = np.where(taueq_s < 1e-12, np.ones_like(taueq_s), taueq_s)
N_s = 3./2.*taud_s/div
phi_s = taueq_s-(tauy0+H*ep_t)
phi_s = 1./2.*(phi_s+np.abs(phi_s))
# return map
dgamma = phi_s/(H+3.*mu)
ep = ep_t + dgamma
tau = tau_s -2.*dgamma*N_s*mu
lnbe = lnbe_s-2.*dgamma*N_s
be = exp2(lnbe)
P = standalone_dot22(tau,standalone_inv2(F).T)
# consistent tangent operator
a0 = dgamma*mu/taueq_s
a1 = mu/(H+3.*mu)
C4ep = (((K-2./3.*mu)/2.+a0*mu)*II+(1.-3.*a0)*mu*
I4s+2.*mu*(a0-a1)*standalone_dyad22(N_s,N_s))
dlnbe4_s = dln2_d2(be_s)
dbe4_s = 2.*standalone_dot42(I4s,be_s)
#K4a = ((C4e/2.)*(phi_s<=0.).astype(np.float)+
# C4ep*(phi_s>0.).astype(np.float))
K4a = np.where(phi_s<=0, C4e/2., C4ep)
K4b = standalone_ddot44(K4a,standalone_ddot44(dlnbe4_s,dbe4_s))
K4c = standalone_dot42(-I4rt,tau)+K4b
K4 = standalone_dot42(standalone_dot24(standalone_inv2(F),K4c),standalone_inv2(F).T)
return P,tau,K4,be,ep, dlnbe4_s, dbe4_s, K4a, K4b, K4c
# ----------------------------- TENSOR OPERATIONS -----------------------------
# tensor operations / products: np.einsum enables index notation, avoiding loops
# e.g. ddot42 performs $C_ij = A_ijkl B_lk$ for the entire grid
trans2 = lambda A2 : np.einsum('ijxyz ->jixyz ',A2 )
ddot22 = lambda A2,B2: np.einsum('ijxyz ,jixyz ->xyz ',A2,B2)
ddot42 = lambda A4,B2: np.einsum('ijklxyz,lkxyz ->ijxyz ',A4,B2)
ddot44 = lambda A4,B4: np.einsum('ijklxyz,lkmnxyz->ijmnxyz',A4,B4)
dot11 = lambda A1,B1: np.einsum('ixyz ,ixyz ->xyz ',A1,B1)
dot22 = lambda A2,B2: np.einsum('ijxyz ,jkxyz ->ikxyz ',A2,B2)
dot24 = lambda A2,B4: np.einsum('ijxyz ,jkmnxyz->ikmnxyz',A2,B4)
dot42 = lambda A4,B2: np.einsum('ijklxyz,lmxyz ->ijkmxyz',A4,B2)
dyad22 = lambda A2,B2: np.einsum('ijxyz ,klxyz ->ijklxyz',A2,B2)
dyad11 = lambda A1,B1: np.einsum('ixyz ,jxyz ->ijxyz ',A1,B1)
# eigenvalue decomposition of 2nd-order tensor: return in convention i,j,x,y,z
# NB requires to swap default order of NumPy (in in/output)
def eig2(A2):
swap1i = lambda A1: np.einsum('xyzi ->ixyz ',A1)
swap2 = lambda A2: np.einsum('ijxyz->xyzij',A2)
swap2i = lambda A2: np.einsum('xyzij->ijxyz',A2)
vals,vecs = np.linalg.eig(swap2(A2))
vals = swap1i(vals)
vecs = swap2i(vecs)
return vals,vecs
# logarithm of grid of 2nd-order tensors
def ln2(A2):
vals,vecs = eig2(A2)
return sum([np.log(vals[i])*dyad11(vecs[:,i],vecs[:,i]) for i in range(3)])
# exponent of grid of 2nd-order tensors
def exp2(A2):
vals,vecs = eig2(A2)
return sum([np.exp(vals[i])*dyad11(vecs[:,i],vecs[:,i]) for i in range(3)])
# determinant of grid of 2nd-order tensors
def det2(A2):
return (A2[0,0]*A2[1,1]*A2[2,2]+A2[0,1]*A2[1,2]*A2[2,0]+A2[0,2]*A2[1,0]*A2[2,1])-\
(A2[0,2]*A2[1,1]*A2[2,0]+A2[0,1]*A2[1,0]*A2[2,2]+A2[0,0]*A2[1,2]*A2[2,1])
# inverse of grid of 2nd-order tensors
def inv2(A2):
A2det = det2(A2)
A2inv = np.empty([3,3,Nx,Ny,Nz])
A2inv[0,0] = (A2[1,1]*A2[2,2]-A2[1,2]*A2[2,1])/A2det
A2inv[0,1] = (A2[0,2]*A2[2,1]-A2[0,1]*A2[2,2])/A2det
A2inv[0,2] = (A2[0,1]*A2[1,2]-A2[0,2]*A2[1,1])/A2det
A2inv[1,0] = (A2[1,2]*A2[2,0]-A2[1,0]*A2[2,2])/A2det
A2inv[1,1] = (A2[0,0]*A2[2,2]-A2[0,2]*A2[2,0])/A2det
A2inv[1,2] = (A2[0,2]*A2[1,0]-A2[0,0]*A2[1,2])/A2det
A2inv[2,0] = (A2[1,0]*A2[2,1]-A2[1,1]*A2[2,0])/A2det
A2inv[2,1] = (A2[0,1]*A2[2,0]-A2[0,0]*A2[2,1])/A2det
A2inv[2,2] = (A2[0,0]*A2[1,1]-A2[0,1]*A2[1,0])/A2det
return A2inv
# ------------------------ INITIATE (IDENTITY) TENSORS ------------------------
# identity tensor (single tensor)
i = np.eye(3)
# identity tensors (grid)
I = np.einsum('ij,xyz' , i ,np.ones([Nx,Ny,Nz]))
I4 = np.einsum('ijkl,xyz->ijklxyz',np.einsum('il,jk',i,i),np.ones([Nx,Ny,Nz]))
I4rt = np.einsum('ijkl,xyz->ijklxyz',np.einsum('ik,jl',i,i),np.ones([Nx,Ny,Nz]))
I4s = (I4+I4rt)/2.
II = dyad22(I,I)
# ------------------------------------ FFT ------------------------------------
# projection operator (only for non-zero frequency, associated with the mean)
# NB: vectorized version of "hyper-elasticity.py"
# - allocate / support function
Ghat4 = np.zeros([3,3,3,3,Nx,Ny,Nz]) # projection operator
x = np.zeros([3 ,Nx,Ny,Nz],dtype='int64') # position vectors
q = np.zeros([3 ,Nx,Ny,Nz],dtype='int64') # frequency vectors
delta = lambda i,j: np.float(i==j) # Dirac delta function
# - set "x" as position vector of all grid-points [grid of vector-components]
x[0],x[1],x[2] = np.mgrid[:Nx,:Ny,:Nz]
# - convert positions "x" to frequencies "q" [grid of vector-components]
for i in range(3):
freq = np.arange(-(shape[i]-1)/2,+(shape[i]+1)/2,dtype='int64')
q[i] = freq[x[i]]
# - compute "Q = ||q||", and "norm = 1/Q" being zero for the mean (Q==0)
# NB: avoid zero division
q = q.astype(np.float)
Q = dot11(q,q)
Z = Q==0
Q[Z] = 1.
norm = 1./Q
norm[Z] = 0.
# - set projection operator [grid of tensors]
for i, j, l, m in itertools.product(range(3), repeat=4):
Ghat4[i,j,l,m] = norm*delta(i,m)*q[j]*q[l]
# (inverse) Fourier transform (for each tensor component in each direction)
fft = lambda x: np.fft.fftshift(np.fft.fftn (np.fft.ifftshift(x),[Nx,Ny,Nz]))
ifft = lambda x: np.fft.fftshift(np.fft.ifftn(np.fft.ifftshift(x),[Nx,Ny,Nz]))
# functions for the projection 'G', and the product 'G : K^LT : (delta F)^T'
G = lambda A2 : np.real( ifft( ddot42(Ghat4,fft(A2)) ) ).reshape(-1)
K_dF = lambda dFm: trans2(ddot42(K4,trans2(dFm.reshape(3,3,Nx,Ny,Nz))))
G_K_dF = lambda dFm: G(K_dF(dFm))
# --------------------------- CONSTITUTIVE RESPONSE ---------------------------
# constitutive response to a certain loading and history
# NB: completely uncoupled from the FFT-solver, but implemented as a regular
# grid of quadrature points, to have an efficient code;
# each point is completely independent, just evaluated at the same time
def constitutive(F,F_t,be_t,ep_t):
# function to compute linearization of the logarithmic Finger tensor
def dln2_d2(A2):
vals,vecs = eig2(A2)
K4 = np.zeros([3,3,3,3,Nx,Ny,Nz])
for m, n in itertools.product(range(3),repeat=2):
gc = (np.log(vals[n])-np.log(vals[m]))/(vals[n]-vals[m])
gc[vals[n]==vals[m]] = (1.0/vals[m])[vals[n]==vals[m]]
K4 += gc*dyad22(dyad11(vecs[:,m],vecs[:,n]),dyad11(vecs[:,m],vecs[:,n]))
return K4
# elastic stiffness tensor
C4e = K*II+2.*mu*(I4s-1./3.*II)
# trial state
Fdelta = dot22(F,inv2(F_t))
be_s = dot22(Fdelta,dot22(be_t,trans2(Fdelta)))
lnbe_s = ln2(be_s)
tau_s = ddot42(C4e,lnbe_s)/2.
taum_s = ddot22(tau_s,I)/3.
taud_s = tau_s-taum_s*I
taueq_s = np.sqrt(3./2.*ddot22(taud_s,taud_s))
div = np.where(taueq_s < 1e-12, np.ones_like(taueq_s), taueq_s)
N_s = 3./2.*taud_s/div
phi_s = taueq_s-(tauy0+H*ep_t)
phi_s = 1./2.*(phi_s+np.abs(phi_s))
# return map
dgamma = phi_s/(H+3.*mu)
ep = ep_t + dgamma
tau = tau_s -2.*dgamma*N_s*mu
lnbe = lnbe_s-2.*dgamma*N_s
be = exp2(lnbe)
P = dot22(tau,trans2(inv2(F)))
# consistent tangent operator
a0 = dgamma*mu/taueq_s
a1 = mu/(H+3.*mu)
C4ep = ((K-2./3.*mu)/2.+a0*mu)*II+(1.-3.*a0)*mu*I4s+2.*mu*(a0-a1)*dyad22(N_s,N_s)
dlnbe4_s = dln2_d2(be_s)
dbe4_s = 2.*dot42(I4s,be_s)
#K4a = (C4e/2.)*(phi_s<=0.).astype(np.float)+C4ep*(phi_s>0.).astype(np.float)
K4a = np.where(phi_s<=0, C4e/2., C4ep)
K4b = ddot44(K4a,ddot44(dlnbe4_s,dbe4_s))
K4c = dot42(-I4rt,tau)+K4b
K4 = dot42(dot24(inv2(F),K4c),trans2(inv2(F)))
return P,K4,be,ep, dlnbe4_s, dbe4_s, K4a, K4b, K4c
# phase indicator: square inclusion of volume fraction (3*3*15)/(11*13*15)
phase = np.zeros([Nx,Ny,Nz]); phase[0,0,0] = 1.
# function to convert material parameters to grid of scalars
param = lambda M0,M1: M0*np.ones([Nx,Ny,Nz])*(1.-phase)+\
M1*np.ones([Nx,Ny,Nz])* phase
# material parameters
K = param(0.833,0.833) # bulk modulus
Kmat = K
mu = param(0.386,0.386) # shear modulus
H = param(0.004,0.008) # hardening modulus
tauy0 = param(0.003,0.006) # initial yield stress
# ---------------------------------- LOADING ----------------------------------
# stress, deformation gradient, plastic strain, elastic Finger tensor
# NB "_t" signifies that it concerns the value at the previous increment
ep_t = np.zeros([ Nx,Ny,Nz])
P = np.zeros([3,3,Nx,Ny,Nz])
F = np.array(I,copy=True)
F_t = np.array(I,copy=True)
be_t = np.array(I,copy=True)
# initialize macroscopic incremental loading
ninc = 50
lam = 0.0
barF = np.array(I,copy=True)
barF_t = np.array(I,copy=True)
# initial tangent operator: the elastic tangent
K4 = K*II+2.*mu*(I4s-1./3.*II)
class ElastoPlastic_Check(unittest.TestCase):
t2_comparator = elastic_ref.LinearElastic_Check.t2_comparator
t4_comparator = elastic_ref.LinearElastic_Check.t4_comparator
def scalar_comparator(self, µ, g):
err_sum = 0.
err_max = 0.
for counter, (i, j, k) in enumerate(self.rve):
print((i,j,k))
µ_arr = µ[counter]
g_arr = g[i,j,k]
self.assertEqual(Nz*Ny*i+Nz*j + k, counter)
print("µSpectre:")
print(µ_arr)
print("Goose:")
print(g_arr)
print(µ_arr-g_arr)
err = linalg.norm(µ_arr-g_arr)
print("error norm = {}".format(err))
err_sum += err
err_max = max(err_max, err)
pass
print("∑(err) = {}, max(err) = {}".format (err_sum, err_max))
return err_sum
def setUp(self):
#---------------------------- µSpectre init -----------------------------------
resolution = list(phase.shape)
dim = len(resolution)
self.dim=dim
center = np.array([r//2 for r in resolution])
incl = resolution[0]//5
## Domain dimensions
lengths = [float(r) for r in resolution]
## formulation (small_strain or finite_strain)
formulation = µ.Formulation.finite_strain
## build a computational domain
self.rve = µ.Cell(resolution, lengths, formulation)
def get_E_nu(bulk, shear):
Young = 9*bulk*shear/(3*bulk + shear)
Poisson = Young/(2*shear) - 1
return Young, Poisson
mat = µ.material.MaterialHyperElastoPlastic1_3d
E, nu = get_E_nu(.833, .386)
H = 0.004
tauy0 = .003
self.hard = mat.make(self.rve, 'hard', E, nu, 2*tauy0, 2*H)
self.soft = mat.make(self.rve, 'soft', E, nu, tauy0, H)
for pixel in self.rve:
if pixel[0] == 0 and pixel[1] == 0 and pixel[2] == 0:
self.hard.add_pixel(pixel)
else:
self.soft.add_pixel(pixel)
pass
pass
return
def test_solve(self):
strict_tol = 1e-11
cg_tol = 1e-11
after_cg_tol = 1e-10
newton_tol = 1e-5
self.rve.set_uniform_strain(np.array(np.eye(ndim)))
µF = self.rve.get_strain()
µF_t = µF.copy()
µbarF_t = µF.copy()
# incremental deformation
for inc in range(1,ninc):
print('=============================')
print('inc: {0:d}'.format(inc))
# set macroscopic deformation gradient (pure-shear)
global lam, F, F_t, barF_t, K4, be_t, ep_t
lam += 0.2/float(ninc)
barF = np.array(I,copy=True)
barF[0,0] = (1.+lam)
barF[1,1] = 1./(1.+lam)
def rel_error_scalar(µ, g, tol, do_assert=True):
err = (linalg.norm(scalar_vec_to_goose(µ) - g.reshape(-1)) /
linalg.norm(g))
if not (err < tol):
self.scalar_comparator(µ.reshape(-1), g)
if do_assert:
self.assertLess(err, tol)
else:
print("AssertionWarning: {} is not less than {}".format(
err, tol))
pass
return err
def rel_error_t2(µ, g, tol, do_assert=True):
err = linalg.norm(t2_vec_to_goose(µ) - g.reshape(-1)) / linalg.norm(g)
if not (err < tol):
self.t2_comparator(µ.reshape(µF.shape), g.reshape(F.shape))
if do_assert:
self.assertLess(err, tol)
else:
print("AssertionWarning: {} is not less than {}".format(
err, tol))
pass
return err
def rel_error_t4(µ, g, tol, right_transposed=True, do_assert=True, pixel_tol=1e-4):
err = linalg.norm(t4_vec_to_goose(µ) - g.reshape(-1)) / linalg.norm(g)
errors = None
if not (err < tol):
err_sum, errors = self.t4_comparator(µ.reshape(µK.shape),
g.reshape(K4.shape),
right_transposed)
if do_assert:
self.assertLess(err, tol)
else:
print("AssertionWarning: {} is not less than {}".format(
err, tol))
pass
return err, errors
def abs_error_t2(µ, g, tol, do_assert=True):
ref_norm = linalg.norm(g)
if ref_norm > 1:
return rel_error_t2(µ, g, tol, do_assert)
else:
err = linalg.norm(t2_vec_to_goose(µ) - g.reshape(-1))
if not (err < tol):
self.t2_comparator(µ.reshape(µF.shape), g.reshape(F.shape))
if do_assert:
self.assertLess(err, tol)
else:
print("AssertionWarning: {} is not less than {}".format(
err, tol))
return err
rel_error_t2(µF, F, strict_tol)
# store normalization
Fn = np.linalg.norm(F)
# first iteration residual: distribute "barF" over grid using "K4"
b = -G_K_dF(barF-barF_t)
F += barF-barF_t
# parameters for Newton iterations: normalization and iteration counter
Fn = np.linalg.norm(F)
iiter = 0
# µSpectre inits
µbarF = np.zeros_like(µF)
µbarF[0, :] = 1. + lam
µbarF[ndim + 1, :] = 1./(1. + lam)
µbarF[-1, :] = 1.
rel_error_t2(µbarF, barF, strict_tol)
if inc == 1:
µP, µK = self.rve.evaluate_stress_tangent(µF)
rel_error_t4(µK, K4, strict_tol)
µF += µbarF - µbarF_t
rel_error_t2(µF, F, strict_tol)
µFn = linalg.norm(µF)
self.assertLess((µFn-Fn)/Fn, strict_tol)
µG_K_dF = lambda x: self.rve.directional_stiffness(x.reshape(µF.shape)).reshape(-1)
µG = lambda x: self.rve.project(x).reshape(-1)
µb = -µG_K_dF(µbarF-µbarF_t)
abs_error_t2(µb, b, strict_tol)
# because of identical elastic properties, µb has got to
# be zero before plasticity kicks in
print("inc = {}".format(inc))
if inc == 1:
self.assertLess(linalg.norm(µb), strict_tol)
#print(self.hard.list_fields())
#print(self.hard.collection.statefield_names)
#sys.exit()
global_be_t = self.rve.get_globalised_current_real_array(
"Previous left Cauchy-Green deformation bₑᵗ")
# iterate as long as the iterative update does not vanish
while True:
# solve linear system using the Conjugate Gradient iterative solver
g_counter = Counter()
dFm,_ = sp.cg(tol=cg_tol,
atol=1e-10,
A = sp.LinearOperator(shape=(F.size,F.size),matvec=G_K_dF,dtype='float'),
b = b,
callback=g_counter
)
µ_counter = Counter()
µdFm,_ = sp.cg(tol=cg_tol,
atol=1e-10,
A = sp.LinearOperator(shape=(F.size,F.size),
matvec=µG_K_dF,dtype='float'),
b = µb,
callback=µ_counter)
err = g_counter.get()-µ_counter.get()
if err != 0:
print("n_iter(g) = {}, n_iter(µ) = {}".format(g_counter.get(),
µ_counter.get()))
print("AssertionWarning: {} != {}".format(g_counter.get(),
µ_counter.get()))
#self.assertEqual(g_counter.get(), µ_counter.get())
try:
err = abs_error_t2(µdFm, dFm, after_cg_tol, do_assert=True)
except Exception as err:
raise err
# add solution of linear system to DOFs
F += dFm.reshape(3,3,Nx,Ny,Nz)
µF += µdFm.reshape(µF.shape)
err = rel_error_t2(µF, F, strict_tol, do_assert=True)
# compute residual stress and tangent, convert to residual
P,K4,be,ep,dln, dbe4_s, K4a, K4b, K4c = constitutive(F,F_t,be_t,ep_t)
µP, µK = self.rve.evaluate_stress_tangent(µF)
err = rel_error_t2(µP, P, strict_tol)
µbe = self.rve.get_globalised_current_real_array(
"Previous left Cauchy-Green deformation bₑᵗ")
err = rel_error_t2(µbe, be, strict_tol)
µep = self.rve.get_globalised_current_real_array(
"cumulated plastic flow εₚ")
err = rel_error_scalar(µep, ep, strict_tol)
#µK4b = self.rve.get_globalised_internal_real_array(
# "debug-T4")
#err = rel_error_t4(µK4c, K4c, strict_tol, do_assert=True)
err, errors = rel_error_t4(µK, K4, strict_tol, do_assert=False)
if not err < strict_tol:
def t2_disp(name, µ, g, i,j,k, index):
g_v = g[:,:,i,j,k].copy()
µ_v = µ[:,index].reshape(3,3).T
print("{}_g =\n{}".format(name, g_v))
print("{}_µ =\n{}".format(name, µ_v))
print("{}_err = {}".format(name, np.linalg.norm(g_v-µ_v)))
return g_v, µ_v
def t0_disp(name, µ, g, i,j,k, index):
g_v = g[i,j,k].copy()
µ_v = µ[:,index]
print("{}_g =\n{}".format(name, g_v))
print("{}_µ =\n{}".format(name, µ_v))
print("{}_err = {}".format(name, abs(g_v-µ_v)))
return g_v, µ_v
for pixel, error in errors.items():
for index, (ir,jr,kr) in enumerate(self.rve):
i,j,k = pixel
if (i,j,k) == (ir,jr,kr):
break
if error > 1e-4:
i,j,k = pixel
print("error for pixel {} ({}) = {}".format(
pixel, index, error))
t2_disp("F", µF, F, i, j, k, index)
t2_disp("be", µbe, be, i, j, k, index)
F_t_n, dummy = t2_disp("F_t", µF_t, F_t, i,j,k,index)
print("ep.shape = {}".format(µep.shape))
t0_disp("ep", µep, ep, i, j, k, index)
K_comp_g = K4[:,:,:,:,i,j,k].reshape(9,9)
K_comp_µ = µK[:, index].reshape(
3,3,3,3).transpose(
1,0,3,2).reshape(9,9)
F_n = F[:,:,i,j,k]
be_n = be_t[:,:,i,j,k]
ep_n = ep_t[i,j,k]
response = constitutive_standalone(Kmat[pixel],
mu[pixel],
H[pixel],
tauy0[pixel],
F_n,
F_t_n, be_n,
ep_n, 3)
P_gn, K_gn = response[0], response[2]
P_µn, K_µn = PK1_fun_3d(Kmat[pixel],
mu[pixel],
H[pixel],
tauy0[pixel], F_n,
F_t_n, be_n, ep_n)
K_µn = K_µn.reshape(3,3,3,3).transpose(1,0,3,2).reshape(9,9)
print("P_µn =\n{}".format(P_µn))
print("P_gn =\n{}".format(P_gn))
P_comp_gn, P_comp_µn = t2_disp(
"P_comp", µP, P, i, j, k, index)
print("|P_µn - P_comp_µn| = {}".format(
np.linalg.norm(P_µn-P_comp_µn)))
print("|P_gn - P_comp_gn| = {}".format(
np.linalg.norm(P_gn-P_comp_gn)))
print("|P_gn - P_µn| = {}".format(
np.linalg.norm(P_gn-P_µn)))
print("|P_comp_gn - P_comp_µn| = {}".format(
np.linalg.norm(P_comp_gn-P_comp_µn)))
print()
K_gn.shape = 9, 9
print("K_µn.shape = {}".format(K_µn.shape))
print("K_gn.shape = {}".format(K_gn.shape))
print("K_comp_g =\n{}".format(K_comp_g))
print("K_comp_µ =\n{}".format(K_comp_µ))
print("K_µn=\n{}".format(K_µn))
print("K_gn=\n{}".format(K_gn))
print("|K_µn - K_comp_µ| = {}".format(
np.linalg.norm(K_µn-K_comp_µ)))
print("|K_gn - K_comp_g| = {}".format(
np.linalg.norm(K_gn-K_comp_g)))
print("|K_gn - K_µn| = {}".format(
np.linalg.norm(K_gn-K_µn)))
print("|K_comp_g - K_comp_µ| = {}".format(
np.linalg.norm(K_comp_g-K_comp_µ)))
break
raise AssertionError(
"at iiter = {}, inc = {}, caught this: '{}'".format(
iiter, inc, err))
b = -G(P)
µb = -µG(µP)
err = abs_error_t2(µb, b, strict_tol)#after_cg_tol)
#print("inc, iiter, err: {}".format((inc, iiter, err)))
#print()
# check for convergence, print convergence info to screen
#print('{0:10.2e}'.format(np.linalg.norm(dFm)/Fn))
print('Goose: rel_residual {:10.15e}, |rhs|: {:10.15e}'.format(
np.linalg.norm(dFm)/Fn, linalg.norm(b)))
print('µSpectre:rel_residual {:10.15e}, |rhs|: {:10.15e}'.format(
np.linalg.norm(µdFm)/µFn, linalg.norm(µb)))
if np.linalg.norm(dFm)/Fn<1.e-5 and iiter>0: break
# update Newton iteration counter
print("reached end of iiter = {}".format(iiter))
iiter += 1
# end-of-increment: update history
barF_t = np.array(barF,copy=True)
µbarF_t[:] = µbarF
F_t = np.array(F ,copy=True)
be_t = np.array(be ,copy=True)
ep_t = np.array(ep ,copy=True)
µF_t[:] = µF
self.rve.save_history_variables()
if __name__ == '__main__':
unittest.main()

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