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compute dpd command
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<div
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>
<span
id=
"index-0"
></span><h1>
compute dpd command
<a
class=
"headerlink"
href=
"#compute-dpd-command"
title=
"Permalink to this headline"
>
¶
</a></h1>
<div
class=
"section"
id=
"syntax"
>
<h2>
Syntax
<a
class=
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href=
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"Permalink to this headline"
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¶
</a></h2>
<div
class=
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><div
class=
"highlight"
><pre>
compute ID group-ID dpd
</pre></div>
</div>
<ul
class=
"simple"
>
<li>
ID, group-ID are documented in
<a
class=
"reference internal"
href=
"compute.html"
><em>
compute
</em></a>
command
</li>
<li>
dpd = style name of this compute command
</li>
</ul>
</div>
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<h2>
Examples
<a
class=
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¶
</a></h2>
<div
class=
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><div
class=
"highlight"
><pre>
compute 1 all dpd
</pre></div>
</div>
</div>
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>
<h2>
Description
<a
class=
"headerlink"
href=
"#description"
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"Permalink to this headline"
>
¶
</a></h2>
<p>
Define a computation that accumulates the total internal conductive
energy (U_cond), the total internal mechanical energy (U_mech), the
total internal energy (U) and the
<em>
harmonic
</em>
average of the internal
temperature (dpdTheta) for the entire system of particles. See the
<a
class=
"reference internal"
href=
"compute_dpd_atom.html"
><em>
compute dpd/atom
</em></a>
command if you want
per-particle internal energies and internal temperatures.
</p>
<p>
The system internal properties are computed according to the following
relations:
</p>
<img
alt=
"Eqs/compute_dpd.jpg"
class=
"align-center"
src=
"Eqs/compute_dpd.jpg"
/>
<p>
where N is the number of particles in the system
</p>
<hr
class=
"docutils"
/>
<p><strong>
Output info:
</strong></p>
<p>
This compute calculates a global vector of length 5 (U_cond, U_mech,
U, dpdTheta, N_particles), which can be accessed by indices 1-5. See
<a
class=
"reference internal"
href=
"Section_howto.html#howto-15"
><span>
this section
</span></a>
for an overview of LAMMPS
output options.
</p>
<p>
The vector values will be in energy and temperature
<a
class=
"reference internal"
href=
"units.html"
><em>
units
</em></a>
.
</p>
</div>
<div
class=
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id=
"restrictions"
>
<h2>
Restrictions
<a
class=
"headerlink"
href=
"#restrictions"
title=
"Permalink to this headline"
>
¶
</a></h2>
<p>
The compute
<em>
dpd
</em>
is only available if LAMMPS is built with the
USER-DPD package and requires the
<a
class=
"reference internal"
href=
"atom_style.html"
><em>
atom_style dpd
</em></a>
.
</p>
</div>
<div
class=
"section"
id=
"related-commands"
>
<h2>
Related commands
<a
class=
"headerlink"
href=
"#related-commands"
title=
"Permalink to this headline"
>
¶
</a></h2>
<p><a
class=
"reference internal"
href=
"compute_dpd_atom.html"
><em>
compute dpd/atom
</em></a>
,
<a
class=
"reference internal"
href=
"thermo_style.html"
><em>
thermo_style
</em></a></p>
<p><strong>
Default:
</strong>
none
</p>
<hr
class=
"docutils"
/>
<p
id=
"larentzos"
><strong>
(Larentzos)
</strong>
J.P. Larentzos, J.K. Brennan, J.D. Moore, and
W.D. Mattson,
“
LAMMPS Implementation of Constant Energy Dissipative
Particle Dynamics (DPD-E)
”
, ARL-TR-6863, U.S. Army Research
Laboratory, Aberdeen Proving Ground, MD (2014).
</p>
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