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BibAuthorID: a new hope
ad8d0ea5fbdc
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Authored by Samuele Carli <samuele.carli@cern.ch> on Oct 22 2013, 17:19.

Description

BibAuthorID: a new hope

Backend:
- Database abstraction layer completely refactored and optimized
  - Changes in tables structures to accomodate new functionalities
- Disambiguation algorithm rewritten, corrected and optimized
  - Off-memory computation!
  - No ad-hoc scheduling needed anymore
  - Improved parallelism
  - Bottlenecks moved to CPython
- Many, many bug fixes
- Improvement in names comparison functions and names handling
- Improvements in signature comparisons
- Introduced Person search engine
Frontend:
- New author profile pages
  - Better layout, more info, better behaviour, mathjax support
- New profile management pages
  - ArXiv and ORCID interaction
  - External and internal ID management
  - Profile merging interface
- New json based ticketing system
  - Much better feedback and usability when claiming papers
- Navigation menu
- Help pages
- Initiated refactoring of templating engine to better MVC model
  
  Co-Authored-by: Nedko Stefanov Nedkov <nedko.stefanov.nedkov@cern.ch> Co-Authored-by: Minn Soe <minn.soe@cern.ch> Co-Authored-by: Thomas Karampelas <thomas.karampelas@cern.ch> Co-Authored-by: Nikolaos Kalodimas <nikolaos.kalodimas@cern.ch> Co-Authored-by: Alessio Deiana <alessio.deiana@cern.ch> Co-Authored-by: Samuele Kaplun <samuele.kaplun@cern.ch>

Details

Committed

Samuele Kaplun <samuele.kaplun@cern.ch>

Dec 18 2013, 16:22

Parents

R3600:dd3d6da9f307: BibRank: unicode recid in citation indexer

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Samuele Kaplun <samuele.kaplun@cern.ch> committed R3600:ad8d0ea5fbdc: BibAuthorID: a new hope (authored by Samuele Carli <samuele.carli@cern.ch>).Dec 18 2013, 16:22

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	M			Makefile.am
	M			config/invenio.conf
	M			modules/bibauthorid/bin/bibauthorid.in
	M			modules/bibauthorid/lib/Makefile.am
	A			modules/bibauthorid/lib/backbone-min.js
	A			modules/bibauthorid/lib/backbone.js
	M			modules/bibauthorid/lib/bibauthorid.js
	M			modules/bibauthorid/lib/bibauthorid_backinterface.py
	A			modules/bibauthorid/lib/bibauthorid_bib_matrix.py
	A			modules/bibauthorid/lib/bibauthorid_bib_matrix_unit_tests.py
	P			modules/bibauthorid/lib/bibauthorid_cli.py Copied to multiple locations: modules/bibauthorid/lib/bibauthorid_dbinterface_unit_tests.py modules/bibauthorid/lib/bibauthorid_prob_matrix_unit_tests.py
	M			modules/bibauthorid/lib/bibauthorid_cluster_set.py
	A			modules/bibauthorid/lib/bibauthorid_cluster_set_unit_tests.py
	M			modules/bibauthorid/lib/bibauthorid_comparison.py
	M			modules/bibauthorid/lib/bibauthorid_config.py
	M			modules/bibauthorid/lib/bibauthorid_daemon.py
	V			modules/bibauthorid/lib/{bibauthorid_dbinterface.py → bibauthorid_dbinterface_old.py}
	V			modules/bibauthorid/lib/{bibauthorid_dbinterface_old.py ← bibauthorid_dbinterface.py}
	P			modules/bibauthorid/lib/bibauthorid_dbinterface_unit_tests.py Copied from modules/bibauthorid/lib/bibauthorid_cli.py
	M			modules/bibauthorid/lib/bibauthorid_frontinterface.py
	M			modules/bibauthorid/lib/bibauthorid_general_utils.py
	A			modules/bibauthorid/lib/bibauthorid_meld_edges.pyx
	M			modules/bibauthorid/lib/bibauthorid_merge.py
	M			modules/bibauthorid/lib/bibauthorid_name_utils.py
	A			modules/bibauthorid/lib/bibauthorid_name_utils_unit_tests.py
	M			modules/bibauthorid/lib/bibauthorid_personid_maintenance.py
	M			modules/bibauthorid/lib/bibauthorid_prob_matrix.py
	P			modules/bibauthorid/lib/bibauthorid_prob_matrix_unit_tests.py Copied from modules/bibauthorid/lib/bibauthorid_cli.py
	M			modules/bibauthorid/lib/bibauthorid_rabbit.py
	M			modules/bibauthorid/lib/bibauthorid_recipes.py
	M			modules/bibauthorid/lib/bibauthorid_scheduler.py
	A			modules/bibauthorid/lib/bibauthorid_search_engine.py
	M			modules/bibauthorid/lib/bibauthorid_searchinterface.py
	M			modules/bibauthorid/lib/bibauthorid_templates.py
	M			modules/bibauthorid/lib/bibauthorid_tortoise.py
	M			modules/bibauthorid/lib/bibauthorid_webapi.py
	M			modules/bibauthorid/lib/bibauthorid_webauthorprofileinterface.py
	M			modules/bibauthorid/lib/bibauthorid_webinterface.py
	M			modules/bibauthorid/lib/bibauthorid_wedge.py
	A			modules/bibauthorid/lib/bootstrap.min.js
	A			modules/bibauthorid/lib/handlebars.js
	A			modules/bibauthorid/lib/underscore-min.js
	M			modules/bibauthorid/web/Makefile.am
	A			modules/bibauthorid/web/bai-help-colorschememapping.xml
	A			modules/bibauthorid/web/bai-help-filelist.xml
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	A			modules/bibauthorid/web/bai-help-themedata.thmx
	A			modules/bibauthorid/web/bai-help.html
	M			modules/bibauthorid/web/bibauthorid.css
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	M			modules/bibformat/etc/format_templates/Makefile.am
	M			modules/bibformat/etc/format_templates/WebAuthorProfile_affiliations_helper.bft
	A			modules/bibformat/etc/format_templates/WebAuthorProfile_data_helper.bft
	M			modules/bibformat/etc/output_formats/Makefile.am
	A			modules/bibformat/etc/output_formats/WAPDAT.bfo
	M			modules/bibformat/lib/elements/Makefile.am
	M			modules/bibformat/lib/elements/bfe_aid_authors.py
	M			modules/bibformat/lib/elements/bfe_authors.py
	M			modules/bibformat/lib/elements/bfe_webauthorpage_affiliations.py
	P			modules/bibformat/lib/elements/bfe_webauthorpage_data.py Copied from modules/webauthorprofile/lib/webauthorprofile_cli.py
	M			modules/bibindex/lib/bibindex_engine.py
	M			modules/bibrank/lib/bibrank_citation_grapher.py
	M			modules/bibrank/lib/bibrank_citation_indexer.py
	M			modules/bibrank/lib/bibrank_citation_searcher.py
	M			modules/bibrank/lib/bibrank_grapher.py
	A			modules/bibrank/lib/bibrank_publication_grapher.py
	M			modules/bibrank/lib/bibrank_selfcites_indexer.py
	M			modules/bibrank/lib/bibrank_selfcites_task.py
	M			modules/miscutil/lib/__init__.py
	M			modules/miscutil/lib/inveniocfg.py
	M			modules/miscutil/lib/textutils.py
	A			modules/miscutil/lib/upgrades/invenio_2012_10_31_WebAuthorProfile_bibformat_dependency_update.py
	A			modules/miscutil/lib/upgrades/invenio_2013_03_18_aidPERSONIDDATA_last_updated.py
	A			modules/miscutil/lib/upgrades/invenio_2013_03_18_bibauthorid_search_engine_tables.py
	P			modules/miscutil/lib/upgrades/invenio_2013_03_18_wapCACHE_object_value_longblob.py Copied from modules/webauthorprofile/lib/webauthorprofile_cli.py
	A			modules/miscutil/lib/upgrades/invenio_2013_09_16_aidPERSONIDDATA_datablob.py
	M			modules/miscutil/lib/urlutils.py
	M			modules/miscutil/sql/tabbibclean.sql
	M			modules/miscutil/sql/tabcreate.sql
	M			modules/miscutil/sql/tabdrop.sql
	M			modules/miscutil/sql/tabfill.sql
	M			modules/webaccess/lib/access_control_config.py
	M			modules/webaccess/lib/external_authentication_oauth2.py
	M			modules/webauthorlist/lib/authorlist_engine.py
	M			modules/webauthorprofile/lib/Makefile.am
	M			modules/webauthorprofile/lib/webauthorprofile.js
	P			modules/webauthorprofile/lib/webauthorprofile_cli.py Copied to multiple locations: modules/bibformat/lib/elements/bfe_webauthorpage_data.py modules/miscutil/lib/upgrades/invenio_2013_03_18_wapCACHE_object_value_longblob.py
	A			modules/webauthorprofile/lib/webauthorprofile_config.py
	M			modules/webauthorprofile/lib/webauthorprofile_corefunctions.py
	M			modules/webauthorprofile/lib/webauthorprofile_daemon.py
	M			modules/webauthorprofile/lib/webauthorprofile_dbapi.py
	M			modules/webauthorprofile/lib/webauthorprofile_interface.py
	A			modules/webauthorprofile/lib/webauthorprofile_orcidutils.py
	A			modules/webauthorprofile/lib/webauthorprofile_publication_grapher.py
	M			modules/webauthorprofile/lib/webauthorprofile_templates.py
	A			modules/webauthorprofile/lib/webauthorprofile_unit_tests.py
	M			modules/webauthorprofile/lib/webauthorprofile_webinterface.py
	M			modules/websearch/lib/search_engine.py
	M			modules/websearch/lib/search_engine_summarizer.py
	M			modules/websearch/lib/websearch_templates.py
	M			modules/websearch/lib/websearch_webinterface.py
	M			modules/websession/lib/websession_webinterface.py
	M			modules/websession/lib/webuser.py
	M			modules/webstyle/img/Makefile.am
	A			modules/webstyle/img/circle_orange.png
	M			modules/webstyle/lib/webinterface_layout.py
	M			modules/webstyle/lib/webpage.py