Use sc.fiji.coloc as package prefix
db38c26db03a
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Authored by Curtis Rueden <ctrueden@wisc.edu> on May 3 2017, 20:13.

Description

Use sc.fiji.coloc as package prefix

Otherwise, scripts would not be able to reference the Coloc_2 class,
because it was packageless. Best practice is for all Fiji components
to always use sc.fiji.<something> as their prefix.

Details

Committed

Curtis Rueden <ctrueden@wisc.edu>

May 3 2017, 20:21

Pushed

oburri

Mar 8 2018, 18:06

Parents

R6269:7479ef73dd90: Organize imports

Branches

Unknown

Tags

Unknown

Event Timeline

Curtis Rueden <ctrueden@wisc.edu> committed R6269:db38c26db03a: Use sc.fiji.coloc as package prefix (authored by Curtis Rueden <ctrueden@wisc.edu>).May 3 2017, 20:21

Changes (116)

		Path
V		src/main/java/{ → sc/fiji/coloc}/ColocImgLibGadgets.java
V		src/main/java/{ → sc/fiji/coloc}/Coloc_2.java
V		src/main/java/{ → sc/fiji/coloc}/Colocalisation_Test.java
V		src/main/java/{ → sc/fiji/coloc}/Colocalisation_Threshold.java
D		src/main/java/algorithms
V		src/main/java/{ → sc/fiji/coloc}/algorithms/Accumulator.java
V		src/main/java/{ → sc/fiji/coloc}/algorithms/Algorithm.java
V		src/main/java/{ → sc/fiji/coloc}/algorithms/AutoThresholdRegression.java
V		src/main/java/{ → sc/fiji/coloc}/algorithms/BisectionStepper.java
V		src/main/java/{ → sc/fiji/coloc}/algorithms/ChannelMapper.java
V		src/main/java/{ → sc/fiji/coloc}/algorithms/CostesSignificanceTest.java
V		src/main/java/{ → sc/fiji/coloc}/algorithms/Histogram2D.java
V		src/main/java/{ → sc/fiji/coloc}/algorithms/InputCheck.java
V		src/main/java/{ → sc/fiji/coloc}/algorithms/IntArraySorter.java
V		src/main/java/{ → sc/fiji/coloc}/algorithms/IntComparator.java
V		src/main/java/{ → sc/fiji/coloc}/algorithms/KendallTauRankCorrelation.java
V		src/main/java/{ → sc/fiji/coloc}/algorithms/LiHistogram2D.java
V		src/main/java/{ → sc/fiji/coloc}/algorithms/LiICQ.java
V		src/main/java/{ → sc/fiji/coloc}/algorithms/MandersColocalization.java
V		src/main/java/{ → sc/fiji/coloc}/algorithms/MissingPreconditionException.java
V		src/main/java/{ → sc/fiji/coloc}/algorithms/PearsonsCorrelation.java
V		src/main/java/{ → sc/fiji/coloc}/algorithms/SimpleStepper.java
V		src/main/java/{ → sc/fiji/coloc}/algorithms/SpearmanRankCorrelation.java
V		src/main/java/{ → sc/fiji/coloc}/algorithms/Stepper.java
D		src/main/java/gadgets
V		src/main/java/{ → sc/fiji/coloc}/gadgets/DataContainer.java
V		src/main/java/{ → sc/fiji/coloc}/gadgets/MaskFactory.java
V		src/main/java/{ → sc/fiji/coloc}/gadgets/Statistics.java
V		src/main/java/{ → sc/fiji/coloc}/gadgets/ThresholdMode.java
D		src/main/java/results
V		src/main/java/{ → sc/fiji/coloc}/results/AnalysisResults.java
V		src/main/java/{ → sc/fiji/coloc}/results/EasyDisplay.java
V		src/main/java/{ → sc/fiji/coloc}/results/NamedContainer.java
V		src/main/java/{ → sc/fiji/coloc}/results/PDFWriter.java
V		src/main/java/{ → sc/fiji/coloc}/results/ResultHandler.java
V		src/main/java/{ → sc/fiji/coloc}/results/SingleWindowDisplay.java
V		src/main/java/{ → sc/fiji/coloc}/results/ValueResult.java
V		src/main/java/{ → sc/fiji/coloc}/results/Warning.java
A	(dir)	src/main/java/sc/
A	(dir)	src/main/java/sc/fiji/
A	(dir)	src/main/java/sc/fiji/coloc/
V		src/main/java/{sc/fiji/coloc ← }/ColocImgLibGadgets.java
V		src/main/java/{sc/fiji/coloc ← }/Coloc_2.java
V		src/main/java/{sc/fiji/coloc ← }/Colocalisation_Test.java
V		src/main/java/{sc/fiji/coloc ← }/Colocalisation_Threshold.java
A	(dir)	src/main/java/sc/fiji/coloc/algorithms/
V		src/main/java/{sc/fiji/coloc ← }/algorithms/Accumulator.java
V		src/main/java/{sc/fiji/coloc ← }/algorithms/Algorithm.java
V		src/main/java/{sc/fiji/coloc ← }/algorithms/AutoThresholdRegression.java
V		src/main/java/{sc/fiji/coloc ← }/algorithms/BisectionStepper.java
V		src/main/java/{sc/fiji/coloc ← }/algorithms/ChannelMapper.java
V		src/main/java/{sc/fiji/coloc ← }/algorithms/CostesSignificanceTest.java
V		src/main/java/{sc/fiji/coloc ← }/algorithms/Histogram2D.java
V		src/main/java/{sc/fiji/coloc ← }/algorithms/InputCheck.java
V		src/main/java/{sc/fiji/coloc ← }/algorithms/IntArraySorter.java
V		src/main/java/{sc/fiji/coloc ← }/algorithms/IntComparator.java
V		src/main/java/{sc/fiji/coloc ← }/algorithms/KendallTauRankCorrelation.java
V		src/main/java/{sc/fiji/coloc ← }/algorithms/LiHistogram2D.java
V		src/main/java/{sc/fiji/coloc ← }/algorithms/LiICQ.java
V		src/main/java/{sc/fiji/coloc ← }/algorithms/MandersColocalization.java
V		src/main/java/{sc/fiji/coloc ← }/algorithms/MissingPreconditionException.java
V		src/main/java/{sc/fiji/coloc ← }/algorithms/PearsonsCorrelation.java
V		src/main/java/{sc/fiji/coloc ← }/algorithms/SimpleStepper.java
V		src/main/java/{sc/fiji/coloc ← }/algorithms/SpearmanRankCorrelation.java
V		src/main/java/{sc/fiji/coloc ← }/algorithms/Stepper.java
A	(dir)	src/main/java/sc/fiji/coloc/gadgets/
V		src/main/java/{sc/fiji/coloc ← }/gadgets/DataContainer.java
V		src/main/java/{sc/fiji/coloc ← }/gadgets/MaskFactory.java
V		src/main/java/{sc/fiji/coloc ← }/gadgets/Statistics.java
V		src/main/java/{sc/fiji/coloc ← }/gadgets/ThresholdMode.java
A	(dir)	src/main/java/sc/fiji/coloc/results/
V		src/main/java/{sc/fiji/coloc ← }/results/AnalysisResults.java
V		src/main/java/{sc/fiji/coloc ← }/results/EasyDisplay.java
V		src/main/java/{sc/fiji/coloc ← }/results/NamedContainer.java
V		src/main/java/{sc/fiji/coloc ← }/results/PDFWriter.java
V		src/main/java/{sc/fiji/coloc ← }/results/ResultHandler.java
V		src/main/java/{sc/fiji/coloc ← }/results/SingleWindowDisplay.java
V		src/main/java/{sc/fiji/coloc ← }/results/ValueResult.java
V		src/main/java/{sc/fiji/coloc ← }/results/Warning.java
M		src/main/resources/plugins.config
M		src/main/resources/script_templates/Examples/Colocalisation.groovy
V		src/test/java/{ → sc/fiji/coloc}/Main.java
A	(dir)	src/test/java/sc/
A	(dir)	src/test/java/sc/fiji/
A	(dir)	src/test/java/sc/fiji/coloc/
V		src/test/java/{sc/fiji/coloc ← }/Main.java
A	(dir)	src/test/java/sc/fiji/coloc/tests/
V		src/test/java/{sc/fiji/coloc ← }/tests/AutoThresholdRegressionTest.java
V		src/test/java/{sc/fiji/coloc ← }/tests/ColocalisationTest.java
V		src/test/java/{sc/fiji/coloc ← }/tests/CommutativityTest.java
V		src/test/java/{sc/fiji/coloc ← }/tests/CostesSignificanceTest.java
V		src/test/java/{sc/fiji/coloc ← }/tests/ImprovedNoise.java
V		src/test/java/{sc/fiji/coloc ← }/tests/KendallTauTest.java
V		src/test/java/{sc/fiji/coloc ← }/tests/LiICQTest.java
V		src/test/java/{sc/fiji/coloc ← }/tests/MandersColocalizationTest.java
V		src/test/java/{sc/fiji/coloc ← }/tests/MaskAndRoiTest.java
V		src/test/java/{sc/fiji/coloc ← }/tests/PearsonsCorrelationTest.java
V		src/test/java/{sc/fiji/coloc ← }/tests/SpearmanRankTest.java
V		src/test/java/{sc/fiji/coloc ← }/tests/StatisticsTest.java
V		src/test/java/{sc/fiji/coloc ← }/tests/TestImageAccessor.java
V		src/test/java/{sc/fiji/coloc ← }/tests/TestInteractively.java
D		src/test/java/tests
V		src/test/java/{ → sc/fiji/coloc}/tests/AutoThresholdRegressionTest.java
V		src/test/java/{ → sc/fiji/coloc}/tests/ColocalisationTest.java
V		src/test/java/{ → sc/fiji/coloc}/tests/CommutativityTest.java
V		src/test/java/{ → sc/fiji/coloc}/tests/CostesSignificanceTest.java
V		src/test/java/{ → sc/fiji/coloc}/tests/ImprovedNoise.java
V		src/test/java/{ → sc/fiji/coloc}/tests/KendallTauTest.java
V		src/test/java/{ → sc/fiji/coloc}/tests/LiICQTest.java
V		src/test/java/{ → sc/fiji/coloc}/tests/MandersColocalizationTest.java
V		src/test/java/{ → sc/fiji/coloc}/tests/MaskAndRoiTest.java
V		src/test/java/{ → sc/fiji/coloc}/tests/PearsonsCorrelationTest.java
V		src/test/java/{ → sc/fiji/coloc}/tests/SpearmanRankTest.java
V		src/test/java/{ → sc/fiji/coloc}/tests/StatisticsTest.java
V		src/test/java/{ → sc/fiji/coloc}/tests/TestImageAccessor.java
V		src/test/java/{ → sc/fiji/coloc}/tests/TestInteractively.java