Commit	Author	Details	Committed
a9d849586c87	pradovera	Bumped version to 2.6	Apr 1 2020
d70b108a7710	pradovera	Added empty parameter sampler to simplify initialization of NN approximants.	Apr 1 2020
4dd4e40c3c9e	pradovera	Merging branch for snapshot storage into develop branch.	Apr 1 2020
26b5e900c13d	pradovera	Improved NN approximant with support-value structure for compatibility with…	Apr 1 2020
a415fe2091d0	pradovera	Bug fixes. Added sample load from list of filenames. Pivoted approximants can…	Apr 1 2020
900b7652ad20	pradovera	Fixed naming issue in HDF5 file creation for fenics mesh serialization.	Apr 1 2020
115d485aaa9c	pradovera	Added support for snapshot storage from approximants. Storage for pivoted…	Apr 1 2020
b3fb8983f0fd	pradovera	Changed sampling engines so that samples always contains non-orthogonalized…	Apr 1 2020
1482cb3bfb4a	pradovera	Ordered test folders for consistency.	Mar 31 2020
99c9db10ec8f	pradovera	Forced approximants to have no sample memory. Fixed broken imports of sampling…	Mar 31 2020
d0fa1960b013	pradovera	Erased pivoted sampling engines. Added storage functionality for sampling…	Mar 31 2020
a35824b905df	pradovera	Improved parallelism in approximants by using v-communications if possible.	Mar 31 2020
22f2e4dda93d	pradovera	Improved parallelism efficiency with v-communications. Removed option to…	Mar 31 2020
5be0ac5adcd1	pradovera	Minor bug fixes.	Mar 31 2020
32d44644b439	pradovera	Externalized rational function matching. Added shift-based matching strategy.	Mar 30 2020
07d7aa821e90	pradovera	Minor simplifications of matrix gather.	Mar 28 2020
f3c1b14ab42d	pradovera	Parallelized greedy error estimators. Parallelized evaluation of pivoted…	Mar 28 2020
6f99958a40f1	pradovera	Added support for serialization of parallel fenics function spaces.	Mar 28 2020
3eb5515a2503	pradovera	Fixed issue with collapse of mus in pivoted approximant. Fixed issue with…	Mar 27 2020
286b57f61fb9	pradovera	Added parallel support for pivoted greedy approximant.	Mar 26 2020
e1838474bb35	pradovera	Added parallel support for pivoted trained model. Added flag for forced…	Mar 26 2020
3ea2698ef82f	pradovera	Removed local serial flags.	Mar 26 2020
213b894bfff2	pradovera	Simplified serial bottlenecks and fixed verbosity manager by introducing global…	Mar 26 2020
a8ae40aa40d6	pradovera	Added parallel support for non-greedy pivoted approximants.	Mar 26 2020
baae524b1b1a	pradovera	Removed tensorized sampling from pivoted sampling engine. Added functionalities…	Mar 26 2020
afb40c1efcb8	pradovera	Added parallel tools. Improved parallel verbosity manager. Still not managing…	Mar 26 2020
fc30c872851d	pradovera	Added basic parallel support for output of generic approximant. Added parallel…	Mar 25 2020
2a9507b519ce	pradovera	Parallelized plotting and Paraview output of engines. Improved parallelization…	Mar 25 2020
5c75572e6108	pradovera	Created submodule for parallelism tools. Updated verbosity manager master core…	Mar 25 2020
ff049bc4bda7	pradovera	Added general parallelism tools. Added parallel option to residual computation.	Mar 25 2020
6abf5f2c7e97	pradovera	Added basic parallel functionalities to engine solve. Added partitioning tools.	Mar 25 2020

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		Path
M		VERSION
M		examples/1_symmetric_disk/symmetric_disk.py
M		examples/1_symmetric_disk/symmetric_disk_engine.py
M		examples/2_double_slit/double_slit.py
M		examples/3_sector_angle/sector_angle.py
M		examples/3_sector_angle/sector_angle_engine.py
M		examples/4_funnel_output/funnel_output.py
M		examples/4_funnel_output/funnel_output_engine.py
M		examples/5_anisotropic_square/anisotropic_square.py
M		examples/5_anisotropic_square/anisotropic_square_engine.py
M		rrompy/hfengines/base/fenics_engine_base.py
M		rrompy/hfengines/base/hfengine_base.py
M		rrompy/hfengines/base/marginal_proxy_engine.py
M		rrompy/hfengines/base/numpy_engine_base.py
M		rrompy/hfengines/base/vector_fenics_engine_base.py
M		rrompy/hfengines/vector_linear_problem/linear_elasticity_problem_engine.py
M		rrompy/parameter/parameter_sampling/__init__.py
P		rrompy/parameter/parameter_sampling/empty_sampler.py Copied from rrompy/sampling/base/__init__.py
M		rrompy/reduction_methods/base/generic_approximant.py
M		rrompy/reduction_methods/base/trained_model/trained_model.py
M		rrompy/reduction_methods/pivoted/generic_pivoted_approximant.py
M		rrompy/reduction_methods/pivoted/greedy/generic_pivoted_greedy_approximant.py
M		rrompy/reduction_methods/pivoted/greedy/rational_interpolant_greedy_pivoted_greedy.py
M		rrompy/reduction_methods/pivoted/greedy/rational_interpolant_pivoted_greedy.py
M		rrompy/reduction_methods/pivoted/rational_interpolant_greedy_pivoted.py
M		rrompy/reduction_methods/pivoted/rational_interpolant_pivoted.py
M		rrompy/reduction_methods/pivoted/trained_model/trained_model_pivoted_rational.py
M		rrompy/reduction_methods/pivoted/trained_model/trained_model_pivoted_rational_nomatch.py
M		rrompy/reduction_methods/standard/generic_standard_approximant.py
M		rrompy/reduction_methods/standard/greedy/generic_greedy_approximant.py
M		rrompy/reduction_methods/standard/greedy/rational_interpolant_greedy.py
M		rrompy/reduction_methods/standard/greedy/reduced_basis_greedy.py
M		rrompy/reduction_methods/standard/nearest_neighbor.py
M		rrompy/reduction_methods/standard/rational_interpolant.py
M		rrompy/reduction_methods/standard/reduced_basis.py
M		rrompy/reduction_methods/standard/trained_model/trained_model_nearest_neighbor.py
M		rrompy/reduction_methods/standard/trained_model/trained_model_rational.py
M		rrompy/reduction_methods/standard/trained_model/trained_model_reduced_basis.py
M		rrompy/sampling/__init__.py
D		rrompy/sampling/base
P		rrompy/sampling/base/__init__.py Deleted after being copied to multiple locations: rrompy/parameter/parameter_sampling/empty_sampler.py rrompy/utilities/parallel/partition.py
V		rrompy/sampling/{base → engines}/pod_engine.py
V		rrompy/sampling/{base/sampling_engine_base.py → engines/sampling_engine_standard.py}
D		rrompy/sampling/base/sampling_engine_base_pivoted.py
A	(dir)	rrompy/sampling/engines/
V		rrompy/sampling/{engines ← standard}/__init__.py
V		rrompy/sampling/{engines ← base}/pod_engine.py
V		rrompy/sampling/{engines/sampling_engine_standard.py ← base/sampling_engine_base.py}
V		rrompy/sampling/{engines ← standard}/sampling_engine_standard_pod.py
D		rrompy/sampling/pivoted
V		rrompy/{sampling/pivoted/__init__.py → utilities/parallel/broadcast.py}
D		rrompy/sampling/pivoted/sampling_engine_pivoted.py
D		rrompy/sampling/pivoted/sampling_engine_pivoted_pod.py
D		rrompy/sampling/standard
V		rrompy/sampling/{standard → engines}/__init__.py
D		rrompy/sampling/standard/sampling_engine_standard.py
V		rrompy/sampling/{standard → engines}/sampling_engine_standard_pod.py
M		rrompy/solver/fenics/__init__.py
A		rrompy/solver/fenics/fenics_serial.py
M		rrompy/utilities/base/pickle_utilities.py
M		rrompy/utilities/base/verbosity_depth.py
M		rrompy/utilities/exception_manager/warning_manager.py
M		rrompy/utilities/numerical/__init__.py
M		rrompy/utilities/numerical/kroneckerer.py
M		rrompy/utilities/numerical/point_matching.py
A	(dir)	rrompy/utilities/parallel/
A		rrompy/utilities/parallel/__init__.py
A		rrompy/utilities/parallel/base.py
V		rrompy/{utilities/parallel/broadcast.py ← sampling/pivoted/__init__.py}
A		rrompy/utilities/parallel/gather.py
V		rrompy/{utilities/parallel/partition.py ← sampling/base/__init__.py}
A		rrompy/utilities/parallel/scatter.py
M		setup.py
A	(dir)	tests/1_utilities/
V		tests/{1_utilities ← utilities}/basic_routines.py
V		tests/{1_utilities ← utilities}/fenics_const.py
V		tests/{1_utilities ← utilities}/fenics_norms.py
V		tests/{1_utilities ← utilities}/heaviside_fitting.py
V		tests/{1_utilities ← utilities}/nearest_neighbor_fitting.py
V		tests/{1_utilities ← utilities}/parameter_sampling.py
V		tests/{1_utilities ← utilities}/poly_fitting.py
V		tests/{1_utilities ← utilities}/radial_fitting.py
V		tests/{1_utilities ← utilities}/sampling.py
A	(dir)	tests/2_hfengines/
V		tests/{2_hfengines ← hfengines}/fracture.py
V		tests/{2_hfengines ← hfengines}/helmholtz_box_scattering_problem_engine.py
V		tests/{2_hfengines ← hfengines}/helmholtz_cavity_scattering_problem_engine.py
V		tests/{2_hfengines ← hfengines}/helmholtz_elasticity.py
V		tests/{2_hfengines ← hfengines}/helmholtz_external.py
V		tests/{2_hfengines ← hfengines}/helmholtz_internal.py
V		tests/{2_hfengines ← hfengines}/helmholtz_square_bubble_domain_problem_engine.py
V		tests/{2_hfengines ← hfengines}/helmholtz_square_bubble_problem_engine.py
V		tests/{2_hfengines ← hfengines}/helmholtz_square_transmission_problem_engine.py
V		tests/{2_hfengines ← hfengines}/laplace.py
V		tests/{2_hfengines ← hfengines}/laplace_disk_gaussian.py
V		tests/{2_hfengines ← hfengines}/linear_elasticity.py
V		tests/{2_hfengines ← hfengines}/linear_elasticity_beam_poisson_ratio_engine.py
V		tests/{2_hfengines ← hfengines}/matrix.py
V		tests/{2_hfengines ← hfengines}/membrane_fracture_engine.py
V		tests/{2_hfengines ← hfengines}/membrane_fracture_nodomain_engine.py
V		tests/{2_hfengines ← hfengines}/rod.xml
V		tests/{2_hfengines ← hfengines}/rod_3d.py
V	(dir)	tests/{3_reduction_methods_1D/ ← reduction_methods_1D}
V		tests/{3_reduction_methods_1D ← reduction_methods_1D}/matrix_fft.py
V		tests/{3_reduction_methods_1D ← reduction_methods_1D}/rational_interpolant_1d.py
V		tests/{3_reduction_methods_1D ← reduction_methods_1D}/rational_interpolant_greedy_1d.py
V		tests/{3_reduction_methods_1D ← reduction_methods_1D}/reduced_basis_1d.py
V		tests/{3_reduction_methods_1D ← reduction_methods_1D}/reduced_basis_greedy_1d.py
V	(dir)	tests/{4_reduction_methods_multiD/ ← reduction_methods_multiD}
V		tests/{4_reduction_methods_multiD ← reduction_methods_multiD}/greedy_pivoted_rational_2d.py
V		tests/{4_reduction_methods_multiD ← reduction_methods_multiD}/matrix_random.py
V		tests/{4_reduction_methods_multiD ← reduction_methods_multiD}/pivoted_rational_2d.py
V		tests/{4_reduction_methods_multiD ← reduction_methods_multiD}/rational_interpolant_2d.py
V		tests/{4_reduction_methods_multiD ← reduction_methods_multiD}/reduced_basis_2d.py
D		tests/hfengines
V		tests/{hfengines → 2_hfengines}/fracture.py
V		tests/{hfengines → 2_hfengines}/helmholtz_box_scattering_problem_engine.py
V		tests/{hfengines → 2_hfengines}/helmholtz_cavity_scattering_problem_engine.py
V		tests/{hfengines → 2_hfengines}/helmholtz_elasticity.py
V		tests/{hfengines → 2_hfengines}/helmholtz_external.py
V		tests/{hfengines → 2_hfengines}/helmholtz_internal.py
V		tests/{hfengines → 2_hfengines}/helmholtz_square_bubble_domain_problem_engine.py
V		tests/{hfengines → 2_hfengines}/helmholtz_square_bubble_problem_engine.py
V		tests/{hfengines → 2_hfengines}/helmholtz_square_transmission_problem_engine.py
V		tests/{hfengines → 2_hfengines}/laplace.py
V		tests/{hfengines → 2_hfengines}/laplace_disk_gaussian.py
V		tests/{hfengines → 2_hfengines}/linear_elasticity.py
V		tests/{hfengines → 2_hfengines}/linear_elasticity_beam_poisson_ratio_engine.py
V		tests/{hfengines → 2_hfengines}/matrix.py
V		tests/{hfengines → 2_hfengines}/membrane_fracture_engine.py
V		tests/{hfengines → 2_hfengines}/membrane_fracture_nodomain_engine.py
V		tests/{hfengines → 2_hfengines}/rod.xml
V		tests/{hfengines → 2_hfengines}/rod_3d.py
V	(dir)	tests/{reduction_methods_1D/ → 3_reduction_methods_1D}
V		tests/{reduction_methods_1D → 3_reduction_methods_1D}/matrix_fft.py
V		tests/{reduction_methods_1D → 3_reduction_methods_1D}/rational_interpolant_1d.py
V		tests/{reduction_methods_1D → 3_reduction_methods_1D}/rational_interpolant_greedy_1d.py
V		tests/{reduction_methods_1D → 3_reduction_methods_1D}/reduced_basis_1d.py
V		tests/{reduction_methods_1D → 3_reduction_methods_1D}/reduced_basis_greedy_1d.py
V	(dir)	tests/{reduction_methods_multiD/ → 4_reduction_methods_multiD}
V		tests/{reduction_methods_multiD → 4_reduction_methods_multiD}/greedy_pivoted_rational_2d.py
V		tests/{reduction_methods_multiD → 4_reduction_methods_multiD}/matrix_random.py
V		tests/{reduction_methods_multiD → 4_reduction_methods_multiD}/pivoted_rational_2d.py
V		tests/{reduction_methods_multiD → 4_reduction_methods_multiD}/rational_interpolant_2d.py
V		tests/{reduction_methods_multiD → 4_reduction_methods_multiD}/reduced_basis_2d.py
D		tests/utilities
V		tests/{utilities → 1_utilities}/basic_routines.py
V		tests/{utilities → 1_utilities}/fenics_const.py
V		tests/{utilities → 1_utilities}/fenics_norms.py
V		tests/{utilities → 1_utilities}/heaviside_fitting.py
V		tests/{utilities → 1_utilities}/nearest_neighbor_fitting.py
V		tests/{utilities → 1_utilities}/parameter_sampling.py
V		tests/{utilities → 1_utilities}/poly_fitting.py
V		tests/{utilities → 1_utilities}/radial_fitting.py
V		tests/{utilities → 1_utilities}/sampling.py