Diffusion ShoulderDB_ImportSegmentMeasureAnalyze (master) History

History
master05ae4482716916e1fb746ea…

Jan 16 2020

Changes in openLogFile.m and plot.m to run plotSCase from another dir than…
05ae44827169
·branch: aterrier-plotUpdate
·aterrier on Jan 16 2020, 10:58.

Jun 29 2019

Small changes in measurSCase.m
33761c0c763e
·aterrier on Jun 29 2019, 23:21.
Error management for landmrks loading
05446cede36c
·aterrier on Jun 29 2019, 22:56.
Merge branch 'master' of https://c4science.
ed71d16061ef
·aterrier on Jun 29 2019, 22:54.
Samll change in measureSCase
554c62397c32
·aterrier on Jun 29 2019, 22:54.
Merge branch 'master' of https://c4science.
0baa20c6be88
·aterrier on Jun 29 2019, 22:44.
Cleaned version of plot
1388e204762e
·aterrier on Jun 29 2019, 22:44.
Added shell command measureSCase.sh to run measureSCase.m in background
995f7eb061bc
·aterrier on Jun 29 2019, 01:26.

Jun 28 2019

Remove unwanted files
7c9e17a5edb9
·aterrier on Jun 28 2019, 23:32.
remove again log and config
8cf554ea38ec
·aterrier on Jun 28 2019, 23:27.
Merge last conflicts
99922bd71ad2
·aterrier on Jun 28 2019, 22:44.
Remove tic in ImportSCase/importSCase.m
3b90fac6ca44
·aterrier on Jun 28 2019, 17:30.
Add check in ShoulderCase/Scapula.m for landmarks file validity
19c3abdea327
·aterrier on Jun 28 2019, 16:59.

May 14 2019

log file removed
7a41906b8b6f
·aterrier on May 14 2019, 16:15.
Add test for landmarks validity
2dca0c2cbf76
·aterrier on May 14 2019, 16:14.

Apr 29 2019

Merge branch 'master' of https://c4science.
b73184e0ef93
·aterrier on Apr 29 2019, 16:28.
Corrected error message display in Scalula.load
bce397c2c4da
·aterrier on Apr 29 2019, 16:22.

Apr 5 2019

Commit changes fo merge
72d9e2cab548
·aterrier on Apr 5 2019, 10:29.
Local changes to be committed before pull
d350a5333495
·aterrier on Apr 5 2019, 10:15.
Unecessary files deleted
356c3b9257bc
·aterrier on Apr 5 2019, 10:13.

Apr 4 2019

Various files removed
9a4eda322b26
·solana on Apr 4 2019, 15:53.
Modified rawFromExcel to extend Excel DB lines to 1999
bac84cd8b778
·aterrier on Apr 4 2019, 15:36.
log files removed
c1c7d1818882
·aterrier on Apr 4 2019, 15:33.
Merge remote-tracking branch 'origin/AvoidMainExcelUpdate'
e2d0fb93c2ad
·aterrier on Apr 4 2019, 15:28.
ImportSCase.m update
84764b9475df
·solana on Apr 4 2019, 15:14.

Mar 1 2019

rm log/dicominfoSCase.log
f5d2e3742978
·aterrier on Mar 1 2019, 15:59.
rm config.txt and log/plotSCase.log
1216af3b2b45
·aterrier on Mar 1 2019, 15:58.
Merge remote-tracking branch 'origin/AvoidMainExcelUpdate'
8f55528a647d
·aterrier on Mar 1 2019, 15:49.
Changing folder and file names
440c61090605
·solana on Mar 1 2019, 15:07.
Protocol Updated: - Alternative with Amira removable
2dbe147a842f
·solana on Mar 1 2019, 15:04.

Feb 28 2019

working correctly. hand writing avoided completely Code to be cleaned
8417e3a4ef60
·solana on Feb 28 2019, 19:41.

Feb 27 2019

Many new errors solved and security added To do: 1. clean code and comments 2.
4bbb99750a2e
·solana on Feb 27 2019, 18:10.

Feb 21 2019

Merge remote-tracking branch 'origin/master'
f9107d13567f
·aterrier on Feb 21 2019, 16:15.
ImportSCase update:
b32ede3fa332
·solana on Feb 21 2019, 15:58.
Merge remote-tracking branch 'origin/master'
cef175fc5ff5
·solana on Feb 21 2019, 14:03.
Import Update simplifying the process
7cbe1d620eb3
·solana on Feb 21 2019, 12:13.

Feb 19 2019

Merge branch 'master' of https://c4science.
8cc1c6d5854c
·aterrier on Feb 19 2019, 17:27.
README update
9c3fd379e20f
·aterrier on Feb 19 2019, 17:26.
Merge remote-tracking branch 'origin/master'
4d64f29579dc
·aterrier on Feb 19 2019, 17:04.
README update
0807ef2eaedc
·aterrier on Feb 19 2019, 17:01.
README update
47af37f16079
·aterrier on Feb 19 2019, 16:57.
Merge remote-tracking branch 'origin/master'
2fc9fe06c004
·aterrier on Feb 19 2019, 16:51.
README updated
d9a0edeab625
·aterrier on Feb 19 2019, 16:31.
README updated
8a3e52d44ee8
·aterrier on Feb 19 2019, 16:08.

Feb 18 2019

Solving " vs ' error in listScase
4b85c99fbf8b
·solana on Feb 18 2019, 16:02.
Solving problem with "P219" vs 'P219' as arguments
5e7cd9775936
·solana on Feb 18 2019, 15:56.

Feb 17 2019

Text mofified by Alex
48005a8e7043
·aterrier on Feb 17 2019, 23:28.

Feb 14 2019

ImportSCase.m update: adding "dataDev\" selection for developers
bb605d15fc1a
·solana on Feb 14 2019, 18:45.
ImporSCase.m and SOP update. "Both shoulders" possibility added
cf783d293a55
·solana on Feb 14 2019, 18:21.
SOP updated to last ImportSCase.m
3bbd5f989485
·solana on Feb 14 2019, 16:01.
Importation SOP
e67293644fba
·solana on Feb 14 2019, 10:37.
DICOM CTs Importation Matlab GUI
56d39bc7a12c
·solana on Feb 14 2019, 09:46.

Feb 13 2019

request window optimized (data folder as argument of listSCase.m)
45d027363ed3
·solana on Feb 13 2019, 17:09.
config.txt completed with request window
0a544ab3f880
·solana on Feb 13 2019, 10:24.

Feb 6 2019

Add argument glenoidDensity in measureSCase
d882935b6dd5
·aterrier on Feb 6 2019, 09:24.

Feb 4 2019

Try-catch for error in dicomreadVolume
6cf54a954015
·aterrier on Feb 4 2019, 15:03.

Feb 3 2019

Glenoid.m and calcDensity.m modified from Paul Cimadomo to work with database
eb10ea532ee1
·aterrier on Feb 3 2019, 22:32.
Transform Glenoid.m in a folder @Glenoid to have a separate file for calDensity
5e81a03b9817
·aterrier on Feb 3 2019, 21:40.

Jan 29 2019

Remove ShoulderCase.m_bk
0d71a3c69253
·aterrier on Jan 29 2019, 10:29.
Merge branch 'master' of https://c4science.
e3f5d4164907
·aterrier on Jan 29 2019, 10:19.

Jan 28 2019

Readme updated
456c711fe431
·aterrier on Jan 28 2019, 21:47.

Jan 23 2019

Added angulusInferiorLocal in ShoulderCase/Scapula.m
ef63a90f530c
·aterrier on Jan 23 2019, 14:04.
Solved conflict in XLS_MySQL_DB/rawFromExcel.m
8a604c05e118
·aterrier on Jan 23 2019, 12:22.
Conflics with XLS_MySQL_DB/rawFromExcel.m solved
c357837ef79f
·aterrier on Jan 23 2019, 09:01.

Jan 16 2019

Error (typo?) corrected in scapula_addmeasure
0a867d923adf
·aterrier on Jan 16 2019, 09:53.
Add filename argument in function rawFromExcel
3702d81818d7
·aterrier on Jan 16 2019, 09:52.
Small (typo?) error corrected in XLS_MySQL_DB/patientFromExcel
36843b50dd5d
·aterrier on Jan 16 2019, 09:50.
Typo in README
56cf66d81d80
·aterrier on Jan 16 2019, 09:43.

Jan 15 2019

confix.txt removed
7720d6161af0
·aterrier on Jan 15 2019, 20:57.
Small typo in config.txt
1534587d69e8
·aterrier on Jan 15 2019, 20:55.
Comment added at the beginning of function openConfigFile to describe the…
985c4ccdb66d
·aterrier on Jan 15 2019, 20:39.
Add function openConfigFile at beginning of code
e4fdfd5fb30c
·aterrier on Jan 15 2019, 16:50.
Add function openConfigFile at beginning of code
5f47d871ab79
·aterrier on Jan 15 2019, 16:43.
Add function openConfigFile at beginning of code
fa43b21789c7
·aterrier on Jan 15 2019, 16:42.
Add function openConfigFile at beginning of code
4f985257cc47
·aterrier on Jan 15 2019, 16:40.
Add function openConfigFile to open file config.txt and get dataDir
c292fe3d5eb5
·aterrier on Jan 15 2019, 16:39.
Add openLogFile function
18ee71c901d4
·aterrier on Jan 15 2019, 16:30.
Add a fclose for logfile
6471e294f510
·aterrier on Jan 15 2019, 16:29.

Jan 9 2019

new function openLogFile implemented in function measureSCase
d6213e878f72
·aterrier on Jan 9 2019, 00:01.

Jan 8 2019

Add a new function openLogFile to start the log file, and implement this…
57d428ade358
·aterrier on Jan 8 2019, 23:57.

Jan 7 2019

Comment in config.txt
94202e3622cb
·aterrier on Jan 7 2019, 21:03.
Remove part of file causing error in reading
8b651311f975
·aterrier on Jan 7 2019, 16:51.
Added alternatives for linux (lbovenus/lbomars), macos and windows access to…
ef6db63640bb
·aterrier on Jan 7 2019, 16:35.
Moved addpath('ShoulderCase') and instance of ShoulderCase just before loop.
7344497df6c5
·aterrier on Jan 7 2019, 16:07.
Set SCase(iSCaseID).dataPath = dataDir within loop instead of before the loop…
18d38689962c
·aterrier on Jan 7 2019, 15:47.

Dec 31 2018

Small error corrected
6a2f4ac48f02
·aterrier on Dec 31 2018, 23:03.
Works with config file
f16cc63c829f
·aterrier on Dec 31 2018, 22:58.
Updated with comments
cef7dcff8c61
·aterrier on Dec 31 2018, 22:57.
Modified to work with config file
663d750ac4af
·aterrier on Dec 31 2018, 22:53.

Dec 30 2018

Add filename argument, corrected SCase sheet name, corrected SCase_ID colomn…
50a784fc7539
·aterrier on Dec 30 2018, 23:59.
Minor changes in the definition of dir variables
86fd82a71ff5
·aterrier on Dec 30 2018, 23:48.
Works with config file and log file
c7b6497c3968
·aterrier on Dec 30 2018, 22:53.
Works with updated listSCase (config file), and corrected error (SCase_id -->…
e4b4c59468ad
·aterrier on Dec 30 2018, 22:46.
Error if config file not present
a074f84485f4
·aterrier on Dec 30 2018, 22:40.
Minor changes in listSCase
93a7e498033d
·aterrier on Dec 30 2018, 22:14.
Remove commented code (to treat single CT-xxx-1 dir) in listSCase
82d2356429d8
·aterrier on Dec 30 2018, 21:55.
listSCase modified to read config file, save log in log dir within current dir.
e900d8e2a796
·aterrier on Dec 30 2018, 21:42.
Add dataDev in config file (probably not done in previous commit)
fd48113123b2
·aterrier on Dec 30 2018, 21:40.
Add dataDev in config file
81359327071c
·aterrier on Dec 30 2018, 21:36.

Dec 24 2018

Various file removed from staging
209e00661fe2
·aterrier on Dec 24 2018, 22:58.

Historymaster05ae4482716916e1fb746ea…

Jan 16 2020

Jun 29 2019

Jun 28 2019

May 14 2019

Apr 29 2019

Apr 5 2019

Apr 4 2019

Mar 1 2019

Feb 28 2019

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Feb 3 2019

Jan 29 2019

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Jan 16 2019

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Dec 31 2018

Dec 30 2018

Dec 24 2018

History
master05ae4482716916e1fb746ea…