Diffusion ShoulderDB_ImportSegmentMeasureAnalyze (master) History

History
master440c610906053e9949f25e3…

Mar 1 2019

Changing folder and file names
440c61090605
·solana on Mar 1 2019, 15:07.
Protocol Updated: - Alternative with Amira removable
2dbe147a842f
·solana on Mar 1 2019, 15:04.

Feb 28 2019

working correctly. hand writing avoided completely Code to be cleaned
8417e3a4ef60
·solana on Feb 28 2019, 19:41.

Feb 27 2019

Many new errors solved and security added To do: 1. clean code and comments 2.
4bbb99750a2e
·solana on Feb 27 2019, 18:10.

Feb 21 2019

ImportSCase update:
b32ede3fa332
·solana on Feb 21 2019, 15:58.
Merge remote-tracking branch 'origin/master'
cef175fc5ff5
·solana on Feb 21 2019, 14:03.
Import Update simplifying the process
7cbe1d620eb3
·solana on Feb 21 2019, 12:13.

Feb 19 2019

Merge remote-tracking branch 'origin/master'
4d64f29579dc
·aterrier on Feb 19 2019, 17:04.
README update
0807ef2eaedc
·aterrier on Feb 19 2019, 17:01.
README update
47af37f16079
·aterrier on Feb 19 2019, 16:57.
Merge remote-tracking branch 'origin/master'
2fc9fe06c004
·aterrier on Feb 19 2019, 16:51.
README updated
d9a0edeab625
·aterrier on Feb 19 2019, 16:31.
README updated
8a3e52d44ee8
·aterrier on Feb 19 2019, 16:08.

Feb 18 2019

Solving " vs ' error in listScase
4b85c99fbf8b
·solana on Feb 18 2019, 16:02.
Solving problem with "P219" vs 'P219' as arguments
5e7cd9775936
·solana on Feb 18 2019, 15:56.

Feb 17 2019

Text mofified by Alex
48005a8e7043
·aterrier on Feb 17 2019, 23:28.

Feb 14 2019

ImportSCase.m update: adding "dataDev\" selection for developers
bb605d15fc1a
·solana on Feb 14 2019, 18:45.
ImporSCase.m and SOP update. "Both shoulders" possibility added
cf783d293a55
·solana on Feb 14 2019, 18:21.
SOP updated to last ImportSCase.m
3bbd5f989485
·solana on Feb 14 2019, 16:01.
Importation SOP
e67293644fba
·solana on Feb 14 2019, 10:37.
DICOM CTs Importation Matlab GUI
56d39bc7a12c
·solana on Feb 14 2019, 09:46.

Feb 13 2019

request window optimized (data folder as argument of listSCase.m)
45d027363ed3
·solana on Feb 13 2019, 17:09.
config.txt completed with request window
0a544ab3f880
·solana on Feb 13 2019, 10:24.

Feb 6 2019

Add argument glenoidDensity in measureSCase
d882935b6dd5
·aterrier on Feb 6 2019, 09:24.

Feb 4 2019

Try-catch for error in dicomreadVolume
6cf54a954015
·aterrier on Feb 4 2019, 15:03.

Feb 3 2019

Glenoid.m and calcDensity.m modified from Paul Cimadomo to work with database
eb10ea532ee1
·aterrier on Feb 3 2019, 22:32.
Transform Glenoid.m in a folder @Glenoid to have a separate file for calDensity
5e81a03b9817
·aterrier on Feb 3 2019, 21:40.

Jan 29 2019

Remove ShoulderCase.m_bk
0d71a3c69253
·aterrier on Jan 29 2019, 10:29.
Merge branch 'master' of https://c4science.
e3f5d4164907
·aterrier on Jan 29 2019, 10:19.

Jan 28 2019

Readme updated
456c711fe431
·aterrier on Jan 28 2019, 21:47.

Jan 23 2019

Added angulusInferiorLocal in ShoulderCase/Scapula.m
ef63a90f530c
·aterrier on Jan 23 2019, 14:04.
Solved conflict in XLS_MySQL_DB/rawFromExcel.m
8a604c05e118
·aterrier on Jan 23 2019, 12:22.
Conflics with XLS_MySQL_DB/rawFromExcel.m solved
c357837ef79f
·aterrier on Jan 23 2019, 09:01.

Jan 16 2019

Error (typo?) corrected in scapula_addmeasure
0a867d923adf
·aterrier on Jan 16 2019, 09:53.
Add filename argument in function rawFromExcel
3702d81818d7
·aterrier on Jan 16 2019, 09:52.
Small (typo?) error corrected in XLS_MySQL_DB/patientFromExcel
36843b50dd5d
·aterrier on Jan 16 2019, 09:50.
Typo in README
56cf66d81d80
·aterrier on Jan 16 2019, 09:43.

Jan 15 2019

confix.txt removed
7720d6161af0
·aterrier on Jan 15 2019, 20:57.
Small typo in config.txt
1534587d69e8
·aterrier on Jan 15 2019, 20:55.
Comment added at the beginning of function openConfigFile to describe the…
985c4ccdb66d
·aterrier on Jan 15 2019, 20:39.
Add function openConfigFile at beginning of code
e4fdfd5fb30c
·aterrier on Jan 15 2019, 16:50.
Add function openConfigFile at beginning of code
5f47d871ab79
·aterrier on Jan 15 2019, 16:43.
Add function openConfigFile at beginning of code
fa43b21789c7
·aterrier on Jan 15 2019, 16:42.
Add function openConfigFile at beginning of code
4f985257cc47
·aterrier on Jan 15 2019, 16:40.
Add function openConfigFile to open file config.txt and get dataDir
c292fe3d5eb5
·aterrier on Jan 15 2019, 16:39.
Add openLogFile function
18ee71c901d4
·aterrier on Jan 15 2019, 16:30.
Add a fclose for logfile
6471e294f510
·aterrier on Jan 15 2019, 16:29.

Jan 9 2019

new function openLogFile implemented in function measureSCase
d6213e878f72
·aterrier on Jan 9 2019, 00:01.

Jan 8 2019

Add a new function openLogFile to start the log file, and implement this…
57d428ade358
·aterrier on Jan 8 2019, 23:57.

Jan 7 2019

Comment in config.txt
94202e3622cb
·aterrier on Jan 7 2019, 21:03.
Remove part of file causing error in reading
8b651311f975
·aterrier on Jan 7 2019, 16:51.
Added alternatives for linux (lbovenus/lbomars), macos and windows access to…
ef6db63640bb
·aterrier on Jan 7 2019, 16:35.
Moved addpath('ShoulderCase') and instance of ShoulderCase just before loop.
7344497df6c5
·aterrier on Jan 7 2019, 16:07.
Set SCase(iSCaseID).dataPath = dataDir within loop instead of before the loop…
18d38689962c
·aterrier on Jan 7 2019, 15:47.

Dec 31 2018

Small error corrected
6a2f4ac48f02
·aterrier on Dec 31 2018, 23:03.
Works with config file
f16cc63c829f
·aterrier on Dec 31 2018, 22:58.
Updated with comments
cef7dcff8c61
·aterrier on Dec 31 2018, 22:57.
Modified to work with config file
663d750ac4af
·aterrier on Dec 31 2018, 22:53.

Dec 30 2018

Add filename argument, corrected SCase sheet name, corrected SCase_ID colomn…
50a784fc7539
·aterrier on Dec 30 2018, 23:59.
Minor changes in the definition of dir variables
86fd82a71ff5
·aterrier on Dec 30 2018, 23:48.
Works with config file and log file
c7b6497c3968
·aterrier on Dec 30 2018, 22:53.
Works with updated listSCase (config file), and corrected error (SCase_id -->…
e4b4c59468ad
·aterrier on Dec 30 2018, 22:46.
Error if config file not present
a074f84485f4
·aterrier on Dec 30 2018, 22:40.
Minor changes in listSCase
93a7e498033d
·aterrier on Dec 30 2018, 22:14.
Remove commented code (to treat single CT-xxx-1 dir) in listSCase
82d2356429d8
·aterrier on Dec 30 2018, 21:55.
listSCase modified to read config file, save log in log dir within current dir.
e900d8e2a796
·aterrier on Dec 30 2018, 21:42.
Add dataDev in config file (probably not done in previous commit)
fd48113123b2
·aterrier on Dec 30 2018, 21:40.
Add dataDev in config file
81359327071c
·aterrier on Dec 30 2018, 21:36.

Dec 24 2018

Various file removed from staging
209e00661fe2
·aterrier on Dec 24 2018, 22:58.
statSCase.m updated by AT
1e755e164d3f
·aterrier on Dec 24 2018, 22:40.
Comment added by JSM
7434b144f712
·aterrier on Dec 24 2018, 22:38.
Updated comment in csv2xlsSCase.m
264615637313
·aterrier on Dec 24 2018, 22:35.
Update listSCase.m
ff76150cfd4b
·aterrier on Dec 24 2018, 22:31.
Small error corrected in README.md
3104f5dd4077
·aterrier on Dec 24 2018, 22:21.
Add emplty calcDensity in Glenoid.m
98c701372cbd
·aterrier on Dec 24 2018, 22:13.
Remove the constrain of CT-xxx-1 in ShoulderCase.m
23594594ab11
·aterrier on Dec 24 2018, 22:10.

Nov 18 2018

Add dicominfoSCase.m, which replaces CTinfoCT.m
e71bb57755cf
·aterrier on Nov 18 2018, 21:51.
Add plotSCase.m function, which display the scapula of a SCase with some…
b10ddef059ec
·aterrier on Nov 18 2018, 21:26.
Add the class ShoulderCase
91ab4a5701bb
·aterrier on Nov 18 2018, 21:13.

Aug 16 2018

Remove xls after writing csv to avoid outdated xls
99c9cb1f408b
·aterrier on Aug 16 2018, 13:07.
README.md replaced readme.md
54ddcc3bd331
·aterrier on Aug 16 2018, 12:50.
readme.md added to local repository
c003a89f3c06
·aterrier on Aug 16 2018, 12:16.
statSCase added to local repository
91f2bd15e819
·aterrier on Aug 16 2018, 12:15.
csv2xlsSCase added to local repository
2930fef27b30
·aterrier on Aug 16 2018, 12:14.
plotSCase added to local repository
753ecd6815f5
·aterrier on Aug 16 2018, 12:13.
measureSCase added to local repository
aef115c10f44
·aterrier on Aug 16 2018, 12:12.
Add listSCase in local repository
9f74455c6ab2
·aterrier on Aug 16 2018, 12:08.
dicominfoSCase added in local repository
d36a8bc25627
·aterrier on Aug 16 2018, 12:01.

Jan 26 2018

readme added in CT directory and comments added in CT/infoCT.m
4b5355e68791
·aterrier on Jan 26 2018, 21:59.

Dec 27 2017

feat: Add caseID in muscle struct
a24d4e758f9c
·kcosende on Dec 27 2017, 14:02.
fix: Change the path to the CT database
33b970a1adec
·kcosende on Dec 27 2017, 14:02.
fix: Correct the path to the database location
e904cadc2345
·kcosende on Dec 27 2017, 14:02.
No change
e47f0486b7e4
·kcosende on Dec 27 2017, 14:02.
Add automatically all folder and subfolder when this script is run.
05553cd3e2fc
·kcosende on Dec 27 2017, 14:02.
If the scapula is segmented, take the AL (Acromion Lateral) on the scapula and…
5f2606627edf
·kcosende on Dec 27 2017, 14:02.

Oct 6 2017

fix: Add a condition about institution name
c59b4f191b3d
·kcosende on Oct 6 2017, 16:13.

Oct 2 2017

Test
d2688ea8a5e5
·kcosende on Oct 2 2017, 13:07.

Sep 29 2017

fix: Change the dimension of matrix DistanceToCyl0
e2a7530d8988
·kcosende on Sep 29 2017, 10:20.

Sep 27 2017

refactor: Remove unused code and fix warnings in scapula_calculation.m
afeb5b82c938
·vmalfroy on Sep 27 2017, 17:43.

Sep 26 2017

fix: Change the format date for birthday patient and CT date
e6c18fd1e866
·kcosende on Sep 26 2017, 11:37.

Historymaster440c610906053e9949f25e3…

Mar 1 2019

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History
master440c610906053e9949f25e3…