Diffusion akantu (bugfixes/43-documentation-problem-with-latex-formatting) History

History
bugfixes/43-documentati…400b63f904dc45a8c1eb14f…

Mar 27 2019

Removed small tweaks made it more stable by copying the profiles
400b63f904dc
·richart on Mar 27 2019, 16:29.
First correct solution obtained with PETSc
f05cce9ba8ca
·richart on Mar 27 2019, 15:52.

Mar 13 2019

refactoring some assembly code
c0e6a0777c8d
·richart on Mar 13 2019, 12:50.

Mar 7 2019

This seams to work to assemble with multiple dofs and in parallel (needs a bit…
0b437330b711
·richart on Mar 7 2019, 16:14.

Feb 26 2019

missing mesh for test dof_manager
abb665e8a286
·richart on Feb 26 2019, 12:49.
communicator test
c35120f97de3
·richart on Feb 26 2019, 12:49.
oversubscribe
410700165571
·richart on Feb 26 2019, 12:48.
Adding modules for debug
dc121aa961ff
·richart on Feb 26 2019, 12:48.
Refactoring code between dof_managers
65d6f0a06f07
·richart on Feb 26 2019, 12:48.

Jan 30 2019

namespacing the type traits
ecc7a17aa46e
·richart on Jan 30 2019, 11:11.
Moving models common tests in a subfolder
309d97039fc6
·richart on Jan 30 2019, 11:09.

Jan 6 2019

Working start point
e36b5bd73bac
·richart on Jan 6 2019, 22:07.

Jan 3 2019

Bug fix in SolverVector
9c361a0b26d6
·richart on Jan 3 2019, 01:31.

Jan 2 2019

PETSc compiles adding SolverVector
031679801dd5
·richart on Jan 2 2019, 17:42.

Dec 30 2018

Bug fixing some tests + sanitizing them
06c17fcbea47
·richart on Dec 30 2018, 15:53.
Scoping more enums
560fb762dcd6
·richart on Dec 30 2018, 15:40.

Dec 28 2018

DOFManagerPETSc almost compiling
8b4d5d785dfe
·richart on Dec 28 2018, 16:14.
Bug fix in petsc detection
46baa0de2ff9
·richart on Dec 28 2018, 16:14.
advancing in the petsc dof manager
06ae11d8c7a5
·richart on Dec 28 2018, 16:14.
updating the matrix definition
bf714c5486a9
·richart on Dec 28 2018, 16:06.
Scoping some enums
5e1c697c5bdd
·richart on Dec 28 2018, 16:03.
Long overdue cleaning in the model folder
d751892f65a7
·richart on Dec 28 2018, 15:48.
Updating FindPETSc
582f5cb87fee
·richart on Dec 28 2018, 15:44.
adding bool as a mesh_data
ff847e3b7b21
·richart on Dec 28 2018, 14:54.

Dec 24 2018

Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private
1d94178d5944
·richart on Dec 24 2018, 11:39.

Dec 20 2018

Added tests for extrinsic cohesive elements with finite def elastic material.
e2611f99bbd3
·brink on Dec 20 2018, 17:36.

Dec 19 2018

Correction in the energies output
4189671f734d
·gallyamov on Dec 19 2018, 13:07.

Nov 22 2018

Bug fix in material viscoelastic
cdbf86d1c70d
·gallyamov on Nov 22 2018, 15:53.

Nov 20 2018

Merge branch 'master' of ssh://c4science.ch/diffusion/AKAPRIV/akantu-private
ea7ead4751dd
·gallyamov on Nov 20 2018, 10:33.
Merge branch 'features/viscoelasticity_maxwell'
b4a66fd0988a
·gallyamov on Nov 20 2018, 10:31.
Adding test and example on viscoelastic material
e1eeccd28964
·gallyamov on Nov 20 2018, 10:29.

Nov 19 2018

Added energy computing functions to viscoelastic material
e4e18007b260
·gallyamov on Nov 19 2018, 10:34.

Nov 9 2018

Bug fix in parallel cohesive insertion:
173bf05bddef
·richart on Nov 9 2018, 16:00.
increasing compatibility of iterators with stl iterators
2eeaee5eb0bb
·richart on Nov 9 2018, 15:58.
Adding -ggdb3 as compilation flags
04bdd77935f2
·richart on Nov 9 2018, 15:58.
Adding scan and exclusiveScan in the communicator
5e39859da2e9
·richart on Nov 9 2018, 15:57.
Minor changes in Jenkinsfile
59e098bb385c
·richart on Nov 9 2018, 12:33.

Nov 6 2018

Bug fix in python interface
8694c737de99
·richart on Nov 6 2018, 20:23.
Bug fix in the node data reader and synchronizer
9265c2128c1c
·richart on Nov 6 2018, 18:45.
try more advances debug flags
d949aa434059
·richart on Nov 6 2018, 17:02.
solved some swig issues
cff39378c9ad
·richart on Nov 6 2018, 17:02.
modernizing material macro
519dde5353b5
·richart on Nov 6 2018, 17:02.
Abaqus reader broken with Boost 1.67 (wont fix)
81659b92f2fc
·richart on Nov 6 2018, 17:01.

Nov 5 2018

Missing file
6601b948c133
·richart on Nov 5 2018, 10:31.

Nov 2 2018

Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private
0060d3f1a2a4
·richart on Nov 2 2018, 17:09.
making firstType lastType deprecated + bug fix in internalfields
7afd32b484b1
·richart on Nov 2 2018, 17:06.

Oct 31 2018

bug fixes in 1d
d4a218d3966d
·richart on Oct 31 2018, 10:32.
modernizing some code
3c94f82ece2c
·richart on Oct 31 2018, 10:31.
Bug fix in array resize
0a98d22843aa
·richart on Oct 31 2018, 10:31.

Oct 30 2018

Merge branch 'master' of ssh://c4science.ch/diffusion/AKAPRIV/akantu-private
b6f3d2010716
·Luke on Oct 30 2018, 11:20.

Oct 18 2018

Protecting path
b9085cfb5cf2
·richart on Oct 18 2018, 11:28.
Jenkinsfile debugging
efbcdc143d5e
·richart on Oct 18 2018, 11:24.

Oct 17 2018

Adding parameters to the build
c300675df99f
·richart on Oct 17 2018, 20:18.
Updated ntn contact to make it compile
f37c3f49eee3
·richart on Oct 17 2018, 20:10.
Merge branch 'master' of ssh://c4science.ch/diffusion/AKAPRIV/akantu-private
14a5c9406f1d
·Luke on Oct 17 2018, 15:49.
Cohesive element corretion due to pbc branch merge
f738ec593c37
·richart on Oct 17 2018, 13:50.
revised PYTHON and LDPATH
e27fd77ac2ad
·Luke on Oct 17 2018, 12:23.

Oct 16 2018

Adding computeBarycenters to the python interface
d7b94b74fcf8
·richart on Oct 16 2018, 18:16.

Oct 12 2018

Correcting the bug of insertion finite_deformation and dump (again)
19368095d709
·richart on Oct 12 2018, 14:26.

Oct 10 2018

Merge branch 'features/pbc'
057a7338660e
·richart on Oct 10 2018, 10:26.

Oct 9 2018

correcting mesh_io_msh nodedata
b2c7ec465ed6
·richart on Oct 9 2018, 12:50.

Sep 25 2018

Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private
33710fe43077
·richart on Sep 25 2018, 18:06.
Adding the mesh nodal data to the python interface
caa62dff9737
·richart on Sep 25 2018, 17:39.

Sep 13 2018

default values for InternalField members
5e18b3fb8fb4
·frerot on Sep 13 2018, 18:42.
modernizing InternalField
9039ed82b00c
·frerot on Sep 13 2018, 13:10.

Sep 12 2018

Adding transform adaptor and nodedata in mesh data
ee46ef34e455
·richart on Sep 12 2018, 13:22.

Sep 6 2018

Bug fixed. Both relaxation and creep tests work now.
b9556bb7142a
·gallyamov on Sep 6 2018, 14:04.

Sep 5 2018

make periodic debugging
dbae85499748
·richart on Sep 5 2018, 13:49.
Making compilation work with gcc >= 8
b2e3aaf7f89b
·richart on Sep 5 2018, 13:48.

Aug 29 2018

Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private
1b4456d7ae8a
·richart on Aug 29 2018, 14:08.
Adding some functions in the python interface
0652e679fb0b
·richart on Aug 29 2018, 14:08.
Expanding single Maxwell element to Maxwell chain
4accfdcef9e3
·gallyamov on Aug 29 2018, 09:37.

Aug 15 2018

Expanded the "Compiling your simulation" part of the manual.
cc25cf27fe4e
·brink on Aug 15 2018, 15:26.
Sourcing the environment file
f377553b72f1
·richart on Aug 15 2018, 15:11.

Aug 14 2018

modified fe_engine python interface
40cfe4f7da48
·richart on Aug 14 2018, 17:55.
Modified Jenkinsfile to report states
f5cd671b0d2d
·richart on Aug 14 2018, 17:55.

Aug 10 2018

refactoring fieldTimesShapes in computeNtb
ad8d20ef3a99
·richart on Aug 10 2018, 16:29.
Few compilation fixes for gcc>=8
d70d5d512379
·richart on Aug 10 2018, 15:30.

Jul 19 2018

commit to push before vacations: this version is currently broken
df0bceaf33e6
·richart on Jul 19 2018, 16:57.

Jun 19 2018

Implementing missing function fir makePeriodic
97c250077a6f
·richart on Jun 19 2018, 15:07.
Add google-benchmark for benchmarking
970b5eee332a
·richart on Jun 19 2018, 13:47.
Rewrote the equation numbers to work properly with pbc
5d088de0cac9
·richart / gallyamov on Jun 19 2018, 12:30.

Jun 17 2018

minor improvements
0c2653c85209
·• arichart on Jun 17 2018, 23:45.
make it compile in sequential too
89a6a203b0c1
·• arichart on Jun 17 2018, 23:45.
Fix for nodeflag change
8ff085b0617c
·• arichart on Jun 17 2018, 23:44.
Bug fix if periodic mesh have more than one dof per node
7f7fb9d7fe04
·• arichart on Jun 17 2018, 23:44.

Jun 15 2018

Initialize the is_periodic variable
d8067ee3265f
·richart on Jun 15 2018, 12:03.
Pre-working stage for PBC:
74090d0c5422
·richart on Jun 15 2018, 11:02.

Jun 6 2018

added previous state restore on Material
f45dac62663f
·frerot on Jun 6 2018, 11:47.
added restore history to InternalField
a277f6eaeece
·frerot on Jun 6 2018, 11:14.

Jun 4 2018

Adding viscoelastic material based on Maxwell chain
32d878ddf5de
·gallyamov on Jun 4 2018, 13:39.

May 30 2018

Multiple changes in order to start implementation of periodicity
92000a4400f5
·richart on May 30 2018, 14:47.

May 17 2018

Merge branch 'master' of c4science:/diffusion/AKAPRIV/akantu-private
9654c0079821
·richart on May 17 2018, 17:04.

May 1 2018

added physical names selector to python interface
d9fdcb3cdbc4
·frerot on May 1 2018, 15:50.
removed import mpi4py from python module
8672f3bc3de9
·frerot on May 1 2018, 15:50.

Apr 17 2018

adding debug info in makePeriodic
829e86f18d5a
·richart on Apr 17 2018, 17:53.

Apr 9 2018

Syntax error in mesh.cc DEBUG_ERROR -> ERROR
f2e358ff7e23
·richart on Apr 9 2018, 14:53.

Apr 4 2018

NodeType becomes NodeFlags + node_prank
4ed50ad78b68
·richart on Apr 4 2018, 17:53.
Adding BBox
1daea34db5dd
·richart on Apr 4 2018, 17:10.
correction in DynamicCommunicationBuffer
b2b9387f4a4e
·richart on Apr 4 2018, 17:10.

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History
bugfixes/43-documentati…400b63f904dc45a8c1eb14f…