Diffusion akantu (features/changes-to-address-joss-review) History

History
features/changes-to…fa861eea39c8715733ebaf9…

Jan 30 2018

Modified patch tests
fa861eea39c8
·richart on Jan 30 2018, 01:12.

Jan 29 2018

Coorecting bugs due to new interface
4569add013e0
·richart on Jan 29 2018, 14:48.
Factorizing code between models
19964688c343
·richart on Jan 29 2018, 14:48.
Adding Range to be able to zip iterators
e0c8291e366e
·richart on Jan 29 2018, 00:06.
integration scheme fix for missing masses
13b464a989f3
·richart on Jan 29 2018, 00:04.
Making gtest and pybind11 coexist in debug mode...
aabda9b7e81b
·richart on Jan 29 2018, 00:03.

Jan 26 2018

Merge branch 'features/dofs-separation-rewrote' of c4science…
d1d97b99f620
·richart on Jan 26 2018, 16:51.
testing const correctness on array
f3307a9f5722
·richart on Jan 26 2018, 16:51.
Debugging the facet_synchronizer
5177ed079215
·richart on Jan 26 2018, 16:48.
Passing the test_synchronizer* in gtest
1f7ecff33a7e
·richart on Jan 26 2018, 16:48.
Compilation correction due to the test eneergis that moved
56f8b9b69e01
·richart on Jan 26 2018, 16:47.
test_parser correction
a09df51cd665
·richart on Jan 26 2018, 16:47.
Minor changes in models
ba2d1eabaaa2
·richart on Jan 26 2018, 16:46.
Changed debug level of mesh facet messages
66495d9b7634
·richart on Jan 26 2018, 16:44.
modified structural mech tests to use structural fixture
625affdba509
·frerot on Jan 26 2018, 16:19.
modified feengine test fixture to accomodate for structural elements
3bf8939f6b96
·frerot on Jan 26 2018, 15:27.
cleanup MeshIOMSHStruct
8ec69c092a39
·frerot on Jan 26 2018, 14:51.
Making test parallel
c5becd9132eb
·richart on Jan 26 2018, 02:33.
Cleaning deprecated tests
e9094bfc9748
·richart on Jan 26 2018, 01:24.
Cleaning the tests and adding pentahedron
573a7a2f9770
·richart on Jan 26 2018, 01:14.

Jan 25 2018

better initialization of memory of structural precompute fields
4868c98d1cfc
·frerot on Jan 25 2018, 17:23.
modified structural model tests to google tests
512ca1361c2e
·frerot on Jan 25 2018, 16:03.
fixed compile error
7611a1d0809a
·frerot on Jan 25 2018, 11:21.
Merge branch 'features/dofs-separation-rewrote' of ssh://c4science.
fbf66d346c66
·frerot on Jan 25 2018, 11:12.
fixed bug when no extra_normal defined
7e2138d9e310
·frerot on Jan 25 2018, 11:12.
bernoulli_3 are working
0c2a4269e7f8
·frerot on Jan 25 2018, 11:09.
Bug fix to avoid to modify const arrays with no compilation errors
7119a77a37b4
·richart on Jan 25 2018, 01:38.
Removing come 0s in the version
3065eaddd53b
·richart on Jan 25 2018, 00:13.
Bug by silently violating the const correctness...
1353a9df14af
·richart on Jan 25 2018, 00:13.
Hardening the code while searching a bug in the parallel version
b2c8fec2b705
·richart on Jan 25 2018, 00:12.
ElementTypeMapArray pretty printers
66d3fdaf8414
·richart on Jan 25 2018, 00:11.

Jan 24 2018

Merge branch 'features/dofs-separation-rewrote' of ssh://c4science.
c2490c44154e
·frerot on Jan 24 2018, 18:13.
Correcting package dependencies for gtest
5b2cba4445bb
·richart on Jan 24 2018, 17:54.
Merge branch 'features/dofs-separation-rewrote' of ssh://c4science.
41a559eaea2c
·frerot on Jan 24 2018, 17:30.
fixing hermite shape functions
473c78de63fc
·frerot on Jan 24 2018, 16:19.
prevent uninitialized mem + old computation of rot matrices in structural
60fc0f7cd213
·frerot on Jan 24 2018, 16:18.
added partial precomputation test for bernoulli_3
f71f2c577501
·frerot on Jan 24 2018, 16:17.
added new test to structural model
dd53ece6e2d3
·frerot on Jan 24 2018, 16:17.
added SingularMatrixException
ee16d69a9aa9
·frerot on Jan 24 2018, 16:15.
Bug fix in buildDualGraph
8bd3c11c7835
·richart on Jan 24 2018, 00:13.

Jan 23 2018

Merge branch 'features/dofs-separation-rewrote' of c4science…
e3ca262d60f6
·richart on Jan 23 2018, 19:32.
Merge branch 'features/dofs-separation-rewrote' of ssh://c4science.
5a18943ba31c
·richart on Jan 23 2018, 19:23.
Forcing CXX_STANDARD on gtest
403e909ee986
·richart on Jan 23 2018, 19:23.
Bug in request handling
6f5652013fda
·richart on Jan 23 2018, 00:01.
Cleaning warning/bugs in release
bd24ef132147
·richart on Jan 23 2018, 00:01.
Accelerating buildDualGraph
8fec32fc551f
·richart on Jan 23 2018, 00:00.
Cleaning FindMumps
520469a2d51f
·richart on Jan 23 2018, 00:00.

Jan 22 2018

cleanup in structural tests
07632db42abe
·frerot on Jan 22 2018, 15:58.
fixed broken structural test because of initFEEngineBoundary
a6b66a4d5c6a
·frerot on Jan 22 2018, 15:48.
Warning correction while compiling in Release
247d65021529
·richart on Jan 22 2018, 01:53.
correction for dumper compilation
c89541f53b1c
·richart on Jan 22 2018, 01:07.

Jan 18 2018

Compiled tests with intel
7e4aba8d393e
·richart on Jan 18 2018, 19:33.
Continuation in the includes handling
9ebe1a77fdb2
·richart on Jan 18 2018, 19:32.

Jan 16 2018

Passing compilation with intel compiler
dbab3a696525
·richart on Jan 16 2018, 20:09.
Changed the way includes are handled for external packages
cafb0c72846b
·richart on Jan 16 2018, 20:08.
Changes to make the heat transfer test compile
8adf9a558516
·richart on Jan 16 2018, 10:30.
Pybind11 handling in test modified to be more conditional
52d80f8f4156
·richart on Jan 16 2018, 10:29.

Jan 12 2018

Some improvements on the cmake system
5b37fc21c50a
·richart on Jan 12 2018, 15:36.
Merge branch 'features/dofs-separation-rewrote' of c4science…
c125960372ea
·richart on Jan 12 2018, 14:06.
Adapting the heat transfer model to make it compile
03de87ebe97e
·richart on Jan 12 2018, 14:04.
making examples compile
24aac2f795e2
·richart on Jan 12 2018, 14:04.
Improving the treatment of includes and external libraries
9b780f2f40a5
·richart on Jan 12 2018, 14:03.

Jan 10 2018

possible setup for applyBC and structural models
24a34460ffdc
·frerot on Jan 10 2018, 17:18.
simple bernoulli beam test is passing
96c885162579
·frerot on Jan 10 2018, 16:02.
Preparing gtest cohesive element tests
a89df6d30a92
·richart on Jan 10 2018, 15:24.
Merge branch 'features/dofs-separation-rewrote' of ssh://c4science.
57c68c9a2bc4
·frerot on Jan 10 2018, 10:53.
protected pybind in test_fe_engine
889652f14e2b
·frerot on Jan 10 2018, 10:52.
setup for structural mechanics tests
dc77230bdf37
·frerot on Jan 10 2018, 10:52.
Modified the way pybind11 and google test are included in akantu
426023b63d6d
·richart on Jan 10 2018, 10:44.

Dec 28 2017

clang-formating
48bd47dcb30f
·richart on Dec 28 2017, 16:59.
More cleaning
f6a2c23e5a12
·richart on Dec 28 2017, 16:58.
Cleaning useless files
112c6b28d642
·richart on Dec 28 2017, 00:27.
Test fe engine precompute working
ce3fb8cc6773
·richart on Dec 28 2017, 00:24.

Dec 22 2017

Merge branch 'features/dofs-separation-rewrote' of c4science…
e5198aa853c4
·richart on Dec 22 2017, 03:20.
Added tests for precomputation of finite element engine
469aa17f263e
·richart on Dec 22 2017, 03:14.

Dec 21 2017

testing precomputation of shapes for bernoulli_2 beams
2f5476e27826
·frerot on Dec 21 2017, 14:58.
Some minor changes to help to compile
7bd4b48b1a38
·richart on Dec 21 2017, 04:19.

Dec 20 2017

commented out output of shapes in FEEngineTemplate's printself
ad0087629fd0
·frerot on Dec 20 2017, 16:12.
testing rotation matrices in test_precomputation for bernoulli beams
60d0a1159c6a
·frerot on Dec 20 2017, 11:28.

Dec 19 2017

fixed all compile errors on ShapeStructural
6ea77414b2e9
·frerot on Dec 19 2017, 17:42.
Added last missing method to ShapeStructural
e73fb8ffe8b4
·frerot on Dec 19 2017, 14:54.
corrected some compile errors in shape structural
39ccf092a32c
·frerot on Dec 19 2017, 09:41.
I don't know how to push apparently... Merge branch 'features/dofs-separation…
216729b4cd0c
·frerot on Dec 19 2017, 08:54.

Dec 18 2017

Adaptation to be able to compile with gcc 5
6af81b9fd766
·richart on Dec 18 2017, 15:59.
Merge branch 'features/dofs-separation-rewrote' of ssh://c4science.
0b3783e31dc3
·frerot on Dec 18 2017, 14:24.
Merge branch 'features/dofs-separation-rewrote' of c4science…
de1518ff57d3
·richart on Dec 18 2017, 02:13.
Changed the way cohesive element are initialized
86e65b53f22d
·richart on Dec 18 2017, 02:11.

Dec 15 2017

Solid mechanics model: Added test for conservation of energy in dynamics.
10212fe38b20
·brink on Dec 15 2017, 14:12.
Merge branch 'features/dofs-separation-rewrote' of ssh://c4science.
4392752f2345
·frerot on Dec 15 2017, 14:10.
added missing methods to ShapeStructural for FEEngine to compile
e7267c3d1947
·frerot on Dec 15 2017, 14:09.
bug fix in interpolation on quadragle_8
621fc6a6da5b
·richart on Dec 15 2017, 01:36.
bug fixes
5020f0033654
·richart on Dec 15 2017, 00:06.
removing a warning
72097863a439
·richart on Dec 15 2017, 00:06.

Dec 14 2017

Merge branch 'features/dofs-separation-rewrote' of c4science…
d5cd2045da6d
·richart on Dec 14 2017, 19:46.
Make test compile again
bf69fc0bc408
·richart on Dec 14 2017, 19:45.
Modified model initilalization
79286ef9af64
·richart on Dec 14 2017, 03:14.

Dec 12 2017

Tests for the solid mechanics model: Generalize fixture for bar meshes.
9c3de0609eaa
·brink on Dec 12 2017, 17:53.
Fixes for work test in static.
46dfae5213e2
·brink on Dec 12 2017, 15:59.
Merge remote-tracking branch 'refs/remotes/origin/features/dofs-separation…
55f303b4af2e
·brink on Dec 12 2017, 15:24.
Fiddled with test for work in static.
9d83a1bdd67e
·brink on Dec 12 2017, 15:21.