enforce the compatibility, for parallelism and for pbc

remove commented line

zeros the torque after each computation

Merge branch 'lammps_2020' of gitlab.com:libmultiscale/libmultiscale into…

remove extra_packages submodules

remove a commented line

correct mass access in the case of granular atom style

remove thermal coupling from the granular module

remove thermal coupling from the granular module

activate lammps options for using in python

remove a torque access in the general use of lammps

ask for the computation of gradients in the pyhton version of AMEL

correct script to have the time report output printed correctly

cleaning

adding torques and angles to lm funcionalities

adding a AMEL script for GRANULAR integration

adding a AMEL script for GRANULAR integration

AMEL version with DEM integration working

adding a AMEL script for GRANULAR integration

correct a typo

adding convenient constructors

adding angular velocities/accelerations as possible fields

simple unit change stuff

allow proper reading of variables from python

AMEL.py functional

adding and correct tests for new python interface

trying to allow read access to component variables

correct weird correction problem

try to implement the getParam correctly

update eigen and pybind

try to implement the getParam correctly

revising AMEL.py

renaming unit system in doc

revising AMEL.py

finish to rename the unit names

rename the unit system in a test

renaming unit system in examples

renaming unit system in doc

renaming unit system in tests

remove compilation warnings

units renaming to match lammps definitions (making more sense)

tune visible variables

update lammps submodule

adding files in gitignore

update lammps submodule

cleaning veriables of cmake

udpate the submodule

update refe atom for new lammps changes

cmake cleaning

modifications for new version of lammps

update lammps version

modifications for new version of lammps

modifications to compile with new lammps version (test not passing)

update the exaemple

integration scheme for the pineapple example

cadd_template ready to test in depth

update the AMEL client in python

adding an example of arbitrary geometry within python

adding a test script for the core template

binding the geometry with possibility to extend

remove pedantic warnings

cadd_template ready to test in depth

remove compilation warnings

adding compute_dd_mesh for testing fake segments against cadd_template

adapt the vector types and compute_cadd_template: still ongoing

Merge branch 'features/cadd' of gitlab.com:libmultiscale/libmultiscale into…

remove a compilation warning

adding scripts to generate burgers and normals

correction python test of paradis usage in test_cadd

cleaning old tests

cleaning old tests

prevent test when Akantu not compiled

Merge branch 'features/cadd' of gitlab.com:libmultiscale/libmultiscale into…

change the initialization of ParaDiS domain to have working python usage

Update .gitlab-ci.yml

Update .gitlab-ci.yml

fix compilation problem

Merge branch 'master' into features/cadd

reshaping compute_add_loop into the more general comnpute_add_segments

update the paradis submodule

update lammps plugin

add a missing include for new gcc version

adding compilation of paradis

remove a useless include

Update .gitlab-ci.yml

Update .gitlab-ci.yml

remove tab

Update .gitlab-ci.yml

gitmodule changed for paradis

compile cadd

Update .gitlab-ci.yml

update the docker

added SonicBenchmark.phaseplotQnorm method

enhanced navigation, removed redundancies, images from nietzscheSource

adding solution from chapter 1

Merge branch 'master' of ssh://c4science.ch/source/pcsc into master

removed OldDriveDivergenceMap, added GammaDivergenceMap