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Nov 10 2017
Nov 10 2017
update setup script
mickmis committed R4444:b7e146a618af: move docker images to separate folder + some modifications in dockerfiles +… (authored by mickmis).
move docker images to separate folder + some modifications in dockerfiles +…
ignore CA updates
Nov 7 2017
Nov 7 2017
rebuild webclient
rebuild webclient
updated keys
rebuild webclient
volume mounter into i2b2-web correctly
add genomic terms in ontology
fix conf problem ssl lighttpd
ligghtpd ssl
rebuild i2b2 web
rebuild i2b2 web
medco aesthetics modifications
mickmis committed R2664:aa3718c45c6f: Merge branch 'fork/1.22.8-medco' of ssh://c4science.ch/diffusion/2664/shrine… (authored by mickmis).
Merge branch 'fork/1.22.8-medco' of ssh://c4science.ch/diffusion/2664/shrine…
Nov 6 2017
Nov 6 2017
mickmis committed R2664:1a4ededb5287: Merge branch 'fork/1.22.8-medco' of ssh://c4science.ch/diffusion/2664/shrine… (authored by mickmis).
Merge branch 'fork/1.22.8-medco' of ssh://c4science.ch/diffusion/2664/shrine…
mickmis committed R2664:f731b2330dd0: shrine webclient: temp fix -> no alert when topics cannot be retrieved (authored by mickmis).
shrine webclient: temp fix -> no alert when topics cannot be retrieved
rebuild webclient + add links
rebuild webclient
mickmis committed R4444:74be4224e25d: rebuild i2b2-web + fix docker-compose mistake (authored by mickmis).
rebuild i2b2-web + fix docker-compose mistake
fix config folder
fix dev profile
add icclusters 3 nodes conf
add icclusters 3 nodes conf
Nov 3 2017
Nov 3 2017
mickmis committed R4434:21797cceb497: remove limitation in medco cell (panel non-mixed denied) (authored by mickmis).
remove limitation in medco cell (panel non-mixed denied)
rebuild shrine webclient
rebuild shrine
mickmis committed R2664:3ce3442a42c7: modification of the temp fix for non sensitive data (authored by mickmis).
modification of the temp fix for non sensitive data
Nov 2 2017
Nov 2 2017
rebuild shrine
mickmis committed R2664:7aef7ed07a8f: Merge branch 'fork/1.22.8-medco' of ssh://c4science.ch/diffusion/2664/shrine… (authored by mickmis).
Merge branch 'fork/1.22.8-medco' of ssh://c4science.ch/diffusion/2664/shrine…
mickmis committed R2664:03177e648bef: temporary fix for non sensitive clinical data translation (authored by mickmis).
temporary fix for non sensitive clinical data translation
mickmis committed R4444:6f414cd0cefc: shrine-webclient: integrate sql credentials from php with docker (authored by mickmis).
shrine-webclient: integrate sql credentials from php with docker
mickmis committed R2664:dc983a282b78: shrine-webclient: integrate sql credentials from php with docker (authored by mickmis).
shrine-webclient: integrate sql credentials from php with docker
mickmis committed R2664:374527006760: shrine query result: when encrypted fix display problem (authored by mickmis).
shrine query result: when encrypted fix display problem
Nov 1 2017
Nov 1 2017
mickmis committed R4444:5b28bf977a33: shrine: remove webclient and fix tomcat admin login (authored by mickmis).
shrine: remove webclient and fix tomcat admin login
mickmis committed R2664:7dec77c53312: Merge branch 'fork/1.22.8-medco' of ssh://c4science.ch/diffusion/2664/shrine… (authored by mickmis).
Merge branch 'fork/1.22.8-medco' of ssh://c4science.ch/diffusion/2664/shrine…
embed encrypted result in shrine
fix problem
fix problem
fix problem
fix problem
mickmis committed R4444:4876cca6ee67: attempt at getting shrine client in php web server (authored by mickmis).
attempt at getting shrine client in php web server
split projects for user service
add service user to be used by shrine
disable authorization steward
try config diff. for steward
fix DB issues (upload_id
remove alias map configuration
Oct 31 2017
Oct 31 2017
mickmis committed R4444:5cf2a1b532e1: fix db users projects + potentially topic approved (authored by mickmis).
fix db users projects + potentially topic approved
split into 2 users
i2b2 rebuild
ignore unlynx binary
i2b2 rebuild
mickmis committed R4434:4eb77204ecb1: modifications to accomodate better the shrine status query (authored by mickmis).
modifications to accomodate better the shrine status query
trust model changed
keys another attempt
shrine version key
shrine test case into account
mickmis committed R4434:31e6d3e53223: medco cell: test case taken into account (authored by mickmis).
medco cell: test case taken into account
add shrine test query support
Oct 30 2017
Oct 30 2017
cosmetic changes
mickmis committed R4444:0ae11f3decf3: Revert "shrine configuration modifications" (authored by mickmis).
Revert "shrine configuration modifications"
mickmis added a reverting change for R4444:7dc1adc723c7: shrine configuration modifications: R4444:0ae11f3decf3: Revert "shrine configuration modifications".
mickmis added a reverting change for R4444:7d3483df347b: shrine configuration modifications: R4444:c7e5cce9ddff: Revert "shrine configuration modifications".
mickmis committed R4444:c7e5cce9ddff: Revert "shrine configuration modifications" (authored by mickmis).
Revert "shrine configuration modifications"
shrine configuration modifications
shrine configuration modifications
attempt at fix
attempt at fix
attempt at fix
attempt at fix
temporary fix for niccolo
temporary fix for niccolo
add keystores
mickmis committed R4444:50f3cf0dbc12: fix forgotten keystore path modfiication (authored by mickmis).
fix forgotten keystore path modfiication
mickmis committed R4444:b25826a7294c: fix forgotten keystore path modfiication (authored by mickmis).
fix forgotten keystore path modfiication
mickmis committed R4444:4d725b2ab5cb: fix forgotten keystore path modfiication (authored by mickmis).
fix forgotten keystore path modfiication
mickmis committed R4444:5428ea3a35c3: shrine: modify keys to have different keystores per nodes (authored by mickmis).
shrine: modify keys to have different keystores per nodes
mickmis committed R4444:54bd6a63c00c: shrine: modify keys to have different keystores per nodes -- different way +… (authored by mickmis).
shrine: modify keys to have different keystores per nodes -- different way +…
shrine docker: optimize caching
fix another configuration ommited
fix new topic url in webclient
mickmis committed R4444:b86d0b772911: update i2b2 database: pm data now manually loaded to have full medco data (authored by mickmis).
update i2b2 database: pm data now manually loaded to have full medco data
added shrine users configuration
Oct 27 2017
Oct 27 2017
mickmis committed R4444:233762ead402: disable steward in shrine configuration (authored by mickmis).
disable steward in shrine configuration
fix shrine server configuration
mickmis committed R4444:192f390c67ca: add mandatory undocumented configuration aliasMap to shrine (authored by mickmis).
add mandatory undocumented configuration aliasMap to shrine
mickmis committed R4444:2ee9781c2bf4: Merge branch 'shrineintegration' of ssh://c4science.ch/source/medco-deployment… (authored by mickmis).
Merge branch 'shrineintegration' of ssh://c4science.ch/source/medco-deployment…
mickmis committed R4444:79fa4ba672af: add mandatory undocumented configuration aliasMap to shrine (authored by mickmis).
add mandatory undocumented configuration aliasMap to shrine
mickmis committed R4444:8a4b6f3ca331: update shrine configuration (trust model>peer to peer) (authored by mickmis).
update shrine configuration (trust model>peer to peer)
fix shrine-server config file
fix database structure
Oct 26 2017
Oct 26 2017
update shrine-database dockerfile
mickmis committed R4444:82e25c7a9b84: remove shrine-server patches, modify shrine sources instead (authored by mickmis).
remove shrine-server patches, modify shrine sources instead
fix medco modification of adapter
fix original shrine sources
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