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pulver (Cyril David Son-Tuyen Pulver)

Projects

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Repositories (4)

User Details

User Since
Dec 5 2018, 10:29 (103 w, 5 d)
Availability
Available
Organization
epfl.ch (university)

Recent Activity

Oct 5 2020

pulver committed R10177:bececb767f56: correcting broadcasting error in get_pseudocounts (authored by pulver).
correcting broadcasting error in get_pseudocounts
Oct 5 2020, 17:09

Oct 2 2020

pulver committed R10177:d4ff7541dee4: giving N, plotting log tpm (authored by pulver).
giving N, plotting log tpm
Oct 2 2020, 16:03
pulver committed R10177:3d8460088d95: preprocessing of E and N automatic (authored by pulver).
preprocessing of E and N automatic
Oct 2 2020, 15:43
pulver committed R10177:009fa13b09e5: row_center.R (authored by pulver).
row_center.R
Oct 2 2020, 14:51
pulver committed R10177:b2f5e5c3acba: get_pseudocounts.R (authored by pulver).
get_pseudocounts.R
Oct 2 2020, 14:50

Sep 28 2020

pulver committed R10177:3fc7a956c985: getActivities with single lambda value across samples (authored by pulver).
getActivities with single lambda value across samples
Sep 28 2020, 19:19

Sep 24 2020

pulver committed R10177:b0befcd88f65: do not correct names of predictors (authored by pulver).
do not correct names of predictors
Sep 24 2020, 14:47

Sep 16 2020

pulver committed R10177:a3ee0478f38a: typos (authored by pulver).
typos
Sep 16 2020, 14:38
pulver committed R10177:8aa38fb18466: removing goldenpath link causing crash (authored by pulver).
removing goldenpath link causing crash
Sep 16 2020, 14:38
pulver committed R10177:40a28e5bfd2c: tyding up get_tpm.R (authored by pulver).
tyding up get_tpm.R
Sep 16 2020, 14:09
pulver committed R10177:3ebba925f3ad: tydied up get_tpm.R (authored by pulver).
tydied up get_tpm.R
Sep 16 2020, 11:14
pulver committed R10177:49baf4cb6710: get_tpm in separate file (authored by pulver).
get_tpm in separate file
Sep 16 2020, 10:51

Sep 15 2020

pulver committed R10177:3f1e68b9bacd: typo (authored by pulver).
typo
Sep 15 2020, 14:35
pulver committed R10177:351a1bdc9336: getActivities log ID (authored by pulver).
getActivities log ID
Sep 15 2020, 13:36
pulver committed R10177:3f5290bdbc76: ylim on plotActivities (authored by pulver).
ylim on plotActivities
Sep 15 2020, 10:31

Jul 10 2020

pulver committed R10668:63bbb1f3ab6c: data + notebook, cerebroviz (authored by pulver).
data + notebook, cerebroviz
Jul 10 2020, 17:17

Jul 6 2020

pulver committed R10570:b332ea332263: problem set 3 finished (authored by pulver).
problem set 3 finished
Jul 6 2020, 15:19

Jun 26 2020

pulver committed R10570:bfc12dd98b66: problem set 3 (authored by pulver).
problem set 3
Jun 26 2020, 10:23

Jun 24 2020

pulver committed R10570:db844712f77a: problem set 2 exo 6 (authored by pulver).
problem set 2 exo 6
Jun 24 2020, 17:55

Jun 16 2020

pulver committed R10595:070ad35043e1: detected an anomaly for a ZKSCAN1 motif, removed the motif from the set to… (authored by pulver).
detected an anomaly for a ZKSCAN1 motif, removed the motif from the set to…
Jun 16 2020, 18:23
pulver committed R10595:7b2a68bcab8f: filtered out Transfac, non human, not directly determined motifs (authored by pulver).
filtered out Transfac, non human, not directly determined motifs
Jun 16 2020, 18:23
pulver committed R10595:4f5248d3bebe: MEME prototype converted matrix worked (with sanity checks) (authored by pulver).
MEME prototype converted matrix worked (with sanity checks)
Jun 16 2020, 15:03
pulver committed R10595:ce52ce681f41: prototype conversion from cisbp to meme, untested (authored by pulver).
prototype conversion from cisbp to meme, untested
Jun 16 2020, 14:08

Jun 10 2020

pulver committed R10570:5bb8245f8019: 6b think (authored by pulver).
6b think
Jun 10 2020, 11:03

Apr 22 2020

pulver committed R10177:1c05ceb60837: size of labels plotActivities (authored by pulver).
size of labels plotActivities
Apr 22 2020, 17:18

Apr 16 2020

pulver committed R10177:b3bb144caa65: cvsd rename in res list (authored by pulver).
cvsd rename in res list
Apr 16 2020, 13:39
pulver committed R10177:0df5e1dc3da4: cvsd fix indexing problem (authored by pulver).
cvsd fix indexing problem
Apr 16 2020, 13:37
pulver committed R10177:6893a2a12861: added cv error and cv std to the result lists of getActivities (authored by pulver).
added cv error and cv std to the result lists of getActivities
Apr 16 2020, 10:28
pulver committed R10177:2ef96af9c686: added lamba_min to the return of getActivities (authored by pulver).
added lamba_min to the return of getActivities
Apr 16 2020, 10:19

Apr 15 2020

pulver committed R10177:48057c61b909: camelCap getActivities (authored by pulver).
camelCap getActivities
Apr 15 2020, 15:31

Apr 9 2020

pulver committed R10177:1d8d54950a2f: corrected perspectives (authored by pulver).
corrected perspectives
Apr 9 2020, 19:48
pulver committed R10177:d4a2d7ac5a71: plotActivities (authored by pulver).
plotActivities
Apr 9 2020, 18:29
pulver committed R10177:c66180c8bfd1: TPM mappable normalization not finished (authored by pulver).
TPM mappable normalization not finished
Apr 9 2020, 09:47

Apr 6 2020

pulver committed R10177:5f9fd1c6fd93: simple parallel with 1 core per glmnet instance, no parallel on CV (authored by pulver).
simple parallel with 1 core per glmnet instance, no parallel on CV
Apr 6 2020, 19:34

Apr 3 2020

pulver committed R10177:f7804fe4fb09: default k fold = 5 (authored by pulver).
default k fold = 5
Apr 3 2020, 19:25
pulver committed R10177:cecfd2d4e51d: clean output as list of r2 and activities for get_activities (authored by pulver).
clean output as list of r2 and activities for get_activities
Apr 3 2020, 18:56

Mar 24 2020

pulver committed R10177:15c3143b1f5d: get_coefficients polished and tested on sample matrices. Not confirmed on whole… (authored by pulver).
get_coefficients polished and tested on sample matrices. Not confirmed on whole…
Mar 24 2020, 17:39

Mar 23 2020

pulver committed R10177:2c9dca0a3566: get_coefficients for ISMARA like TF activity analysis, doesnt run yet (authored by pulver).
get_coefficients for ISMARA like TF activity analysis, doesnt run yet
Mar 23 2020, 18:43

Mar 16 2020

pulver committed R10177:9c18b24957b9: corrected high leverage function to work with hat and not hatvalues (predictor… (authored by pulver).
corrected high leverage function to work with hat and not hatvalues (predictor…
Mar 16 2020, 19:26
pulver committed R10177:06f2b57d66dd: bullshit function purge high leverage points and aliases lm() (authored by pulver).
bullshit function purge high leverage points and aliases lm()
Mar 16 2020, 18:39
pulver committed R10177:998681712f0b: get aliased predictors from lm() (authored by pulver).
get aliased predictors from lm()
Mar 16 2020, 15:39
pulver committed R10177:30705d0969a7: fixed conflict caused by --amend after push for high leverage points (authored by pulver).
fixed conflict caused by --amend after push for high leverage points
Mar 16 2020, 10:39
pulver committed R10177:2210fb6c958f: high leverage points (authored by pulver).
high leverage points
Mar 16 2020, 10:39
pulver committed R10177:894d5020d0d8: high leverage points (authored by pulver).
high leverage points
Mar 16 2020, 10:02

Mar 11 2020

pulver committed R10177:fd2803c34f0a: R function source file get_TPM and correlation heatmap (authored by pulver).
R function source file get_TPM and correlation heatmap
Mar 11 2020, 09:19

Jan 15 2020

pulver set Organization to epfl.ch (university) on pulver.
Jan 15 2020, 11:07