Merge branch 'master' into features/contact
e37c144d7c8c
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Authored by richart on Dec 11 2020, 11:35.

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Merge branch 'master' into features/contact

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Committed

richart

Dec 11 2020, 11:35

Pushed

gitlab-richart

Jul 29 2021, 09:01

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rAKAbbef626f970d: Merge branch 'features/ci_improvement' into 'master'
rAKAf4bb5ed0cc6a: material with plasticity and damage added

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richart committed rAKAe37c144d7c8c: Merge branch 'master' into features/contact (authored by richart).Dec 11 2020, 11:35

Merged Changes

This commit merges a very large number of changes. Only the first 50 are shown.

Commit	Author	Details	Committed
bbef626f970d	richart	Merge branch 'features/ci_improvement' into 'master'	Nov 18 2020
e3342b66c75f	richart	Missed one TYPED_TEST_SUITE	Nov 18 2020
48b82ddbf64c	richart	More variadic macro solved without hiding them	Nov 18 2020
635b7cb827c4	richart	more cleaning	Nov 18 2020
a1669c3ab7f7	richart	Bumping version number since this branch brings API breaking changes	Nov 18 2020
b310ad1abdcb	richart	Small cleaning touches	Nov 18 2020
8d68e92f9ee0	richart	report not working properly	Nov 17 2020
5f8cd7967de5	richart	Bug fix when not in debug	Nov 17 2020
939218e8c341	richart	Reoving editorconfig from codeclimate	Nov 17 2020
9ae994d2400c	richart	Trying out Code Quality	Nov 17 2020
8b50a02ee7f5	richart	Adding code coverage	Nov 17 2020
d58650ce6dc3	richart	Protecting lambda not used in NDEBUG	Nov 17 2020
e3967fa38675	richart	Removing warning in py_material RTFM...	Nov 17 2020
c435093eb4f0	richart	compilation bug fix when mpi is off	Nov 17 2020
081da3e5b7c6	richart	some linting	Nov 17 2020
c424f958ca1f	richart	removing warnings in py_material	Nov 17 2020
d585aba2a74e	richart	still not enough time	Nov 17 2020
6b93b11bbaf9	richart	Extend timeout for tests runing in debug	Nov 17 2020
10664658c20c	richart	Bug fix in the eigen-gradu, with cohesive elements	Nov 16 2020
99b381709af7	richart	Debug in order to be able to do some coverage later on	Nov 16 2020
ffa5a2efe61c	richart	Trying to solve the problem of artefacts	Nov 16 2020
3d77ece78ef4	richart	keeping artefacts longer	Nov 14 2020
9078eff9146c	richart	improving ccache cache hits:	Nov 13 2020
f4783b779273	richart	Bug fix: rebase conflit resolution	Nov 13 2020
e3f8cc5a4768	richart	sharing ccache in between builds	Nov 13 2020
76f62cfa3f0a	richart	Missing marco definition for pybind11	Nov 13 2020
93b4beb364a7	richart	Warning in pybind11	Nov 13 2020
33ef5c2570c3	richart	Correcting deprecated pybind code	Nov 13 2020
4090a168ad5e	richart	Minor improvements to help debugging	Nov 13 2020
da19e76c141c	richart	bug fix in mesh distribution	Nov 13 2020
234da74828e9	richart	Bug fix in size computation	Nov 13 2020
79c61bda7828	richart	bug fix in parallel test_cohesive	Nov 13 2020
4f92994b7984	richart	bug fix in the insertion of 3d elements	Nov 13 2020
19086cd4e3db	richart	Full rewrite of cohesive insertion to ensure the order of insertion across…	Nov 13 2020
0c0644a4376c	richart	Test fix when no implicit solver present	Nov 13 2020
352e8963cc1b	richart	Bug fix	Nov 13 2020
6499a1de98dd	richart	Accounting for stupid version of compilers	Nov 13 2020
e94e01ed97c3	richart	Remaining semicolon	Nov 13 2020
afd7269e93f5	richart	clang-tidy	Nov 13 2020
c5371a97cb63	richart	Modified visibility and headers in pybind interface	Nov 13 2020
85b7d11bb6db	richart	This closes #1, problem with `-j auto` in versions prior to 1.7	Nov 13 2020
ae5a25c2bfad	richart	Bug fix in non_local cleanup	Nov 13 2020
10b19a5ee178	richart	A bit of cleanup of the code	Nov 13 2020
987ebdfa2479	richart	Change in pybind11 compilation	Nov 13 2020
57a358fd660b	richart	Missing openmpi configuration and renaing of docker config folders	Nov 13 2020
1ba2ccb21bb6	richart	Bug fixes and compilation warning cleaning:	Nov 13 2020
1388de54d3a1	richart	[ci] Extanding the ci:	Nov 13 2020
4a441565a071	richart	Adding git information to the code	Nov 13 2020
cfdd63f214a7	richart	Merge branch 'master' of c4science:/diffusion/AKAPRIV/akantu-private into master	Nov 13 2020
33c80c6b352e	richart	Changed the way eigen grad u can be set from the material file	Oct 8 2020

Changes (698)
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M		.clang-tidy
A		.codeclimate.yml
A		.editorconfig
M		.gitignore
M		.gitlab-ci.yml
M		CMakeLists.txt
M		Jenkinsfile
M		VERSION
A		cmake/AkantuBuildOptions.cmake
M		cmake/AkantuExtraCompilationProfiles.cmake
M		cmake/AkantuTestsMacros.cmake
A		cmake/source_informations.sh.in
M		doc/dev-doc/CMakeLists.txt
M		doc/dev-doc/conf.py.in
D		doc/dev-doc/doxygen
D		doc/dev-doc/doxygen/CMakeLists.txt
D		doc/dev-doc/doxygen/akantu.dox.in
M		doc/dev-doc/index.rst
M		doc/dev-doc/manual/fe_engine.rst
M		doc/dev-doc/manual/getting_started.rst
D		doc/dev-doc/sphinx
D		doc/dev-doc/sphinx/CMakeLists.txt
D		doc/dev-doc/sphinx/conf.py
D		doc/dev-doc/sphinx/conf.py.in
D		doc/dev-doc/sphinx/index.rst
M		doc/manual/manual-feengine.tex
M		doc/manual/manual-solidmechanicsmodel.tex
M		examples/boundary_conditions/python_user_defined_bc/python_user_defined_bc.cc
M		examples/cohesive_element/cohesive_extrinsic_ig_tg/triangle.geo
M		examples/io/dumper/dumpable_interface.cc
M		examples/io/dumper/dumper_low_level.cc
M		examples/new_material/local_material_damage.hh
M		examples/new_material/local_material_damage_inline_impl.hh
M		examples/structural_mechanics/bernoulli_beam_2_exemple.cc
M		extra_packages/extra-materials/src/material_FE2/material_FE2.cc
M		extra_packages/extra-materials/src/material_FE2/material_FE2.hh
M		extra_packages/extra-materials/src/material_FE2/solid_mechanics_model_RVE.cc
M		extra_packages/extra-materials/src/material_FE2/solid_mechanics_model_RVE.hh
M		extra_packages/extra-materials/src/material_damage/material_brittle.hh
M		extra_packages/extra-materials/src/material_damage/material_brittle_non_local.hh
M		extra_packages/extra-materials/src/material_damage/material_damage_iterative.cc
M		extra_packages/extra-materials/src/material_damage/material_damage_iterative.hh
M		extra_packages/extra-materials/src/material_damage/material_damage_iterative_inline_impl.hh
M		extra_packages/extra-materials/src/material_damage/material_damage_iterative_non_local.hh
M		extra_packages/extra-materials/src/material_damage/material_damage_iterative_non_local_inline_impl.hh
M		extra_packages/extra-materials/src/material_damage/material_damage_linear.hh
M		extra_packages/extra-materials/src/material_damage/material_iterative_stiffness_reduction.cc
M		extra_packages/extra-materials/src/material_damage/material_iterative_stiffness_reduction.hh
M		extra_packages/extra-materials/src/material_damage/material_orthotropic_damage.hh
M		extra_packages/extra-materials/src/material_damage/material_orthotropic_damage_iterative.cc
M		extra_packages/extra-materials/src/material_damage/material_orthotropic_damage_iterative.hh
M		extra_packages/extra-materials/src/material_damage/material_orthotropic_damage_iterative_non_local.hh
M		extra_packages/extra-materials/src/material_damage/material_orthotropic_damage_non_local.hh
M		extra_packages/extra-materials/src/material_damage/material_orthotropic_damage_tmpl.hh
M		extra_packages/extra-materials/src/material_damage/material_vreepeerlings.hh
M		extra_packages/extra-materials/src/material_damage/material_vreepeerlings_non_local.hh
M		extra_packages/extra-materials/src/material_extra_includes.hh
M		extra_packages/extra-materials/src/material_plastic/material_viscoplastic.cc
M		extra_packages/extra-materials/src/material_plastic/material_viscoplastic.hh
M		extra_packages/extra-materials/src/material_viscoelastic/material_stiffness_proportional.cc
M		extra_packages/extra-materials/src/material_viscoelastic/material_stiffness_proportional.hh
M		extra_packages/extra-materials/test/test_material_damage/test_material_damage_iterative_non_local_serial.cc
M		extra_packages/igfem/src/dumper_igfem_connectivity.hh
M		extra_packages/igfem/src/dumper_igfem_element_iterator.hh
M		extra_packages/igfem/src/dumper_igfem_elemental_field.hh
M		extra_packages/igfem/src/dumper_igfem_generic_elemental_field.hh
M		extra_packages/igfem/src/dumper_igfem_material_internal_field.hh
M		extra_packages/igfem/src/dumper_igfem_quadrature_points_field.hh
M		extra_packages/igfem/src/element_class_igfem.hh
M		extra_packages/igfem/src/fe_engine_template_tmpl_igfem.hh
M		extra_packages/igfem/src/igfem_enrichment.cc
M		extra_packages/igfem/src/igfem_enrichment.hh
M		extra_packages/igfem/src/igfem_helper.hh
M		extra_packages/igfem/src/integrator_gauss_igfem.hh
M		extra_packages/igfem/src/integrator_gauss_igfem_inline_impl.hh
M		extra_packages/igfem/src/material_igfem/igfem_internal_field.hh
M		extra_packages/igfem/src/material_igfem/igfem_internal_field_tmpl.hh
M		extra_packages/igfem/src/material_igfem/material_igfem.cc
M		extra_packages/igfem/src/material_igfem/material_igfem.hh
M		extra_packages/igfem/src/material_igfem/material_igfem_elastic.cc
M		extra_packages/igfem/src/material_igfem/material_igfem_elastic.hh
M		extra_packages/igfem/src/material_igfem/material_igfem_iterative_stiffness_reduction.cc
M		extra_packages/igfem/src/material_igfem/material_igfem_iterative_stiffness_reduction.hh
M		extra_packages/igfem/src/material_igfem/material_igfem_saw_tooth_damage.cc
M		extra_packages/igfem/src/material_igfem/material_igfem_saw_tooth_damage.hh
M		extra_packages/igfem/src/material_igfem/material_igfem_saw_tooth_damage_inline_impl.hh
M		extra_packages/igfem/src/mesh_igfem_spherical_growing_gel.hh
M		extra_packages/igfem/src/non_local_manager_igfem.cc
M		extra_packages/igfem/src/non_local_manager_igfem.hh
M		extra_packages/igfem/src/shape_igfem.cc
M		extra_packages/igfem/src/shape_igfem.hh
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M		extra_packages/igfem/src/solid_mechanics_model_igfem.cc
M		extra_packages/igfem/src/solid_mechanics_model_igfem.hh
M		extra_packages/igfem/src/solid_mechanics_model_igfem_inline_impl.hh
M		extra_packages/igfem/test/test_solid_mechanics_model_igfem/test_ASR_damage.cc
M		extra_packages/igfem/test/test_solid_mechanics_model_igfem/test_solid_mechanics_model_igfem.cc
M		extra_packages/igfem/test/test_solid_mechanics_model_igfem/test_transfer_internals.cc
M		extra_packages/traction-at-split-node-contact/src/boundary_conditions/force_based_dirichlet.hh
M		extra_packages/traction-at-split-node-contact/src/boundary_conditions/inclined_flat_dirichlet.hh
M		extra_packages/traction-at-split-node-contact/src/boundary_conditions/spring_bc.hh
M		extra_packages/traction-at-split-node-contact/src/common/parameter_reader.hh
M		extra_packages/traction-at-split-node-contact/src/common/synchronized_array.cc
M		extra_packages/traction-at-split-node-contact/src/common/synchronized_array.hh
M		extra_packages/traction-at-split-node-contact/src/functions/boundary_functions.hh
M		extra_packages/traction-at-split-node-contact/src/functions/node_filter.hh
M		extra_packages/traction-at-split-node-contact/src/ntn_contact/friction_laws/ntn_friclaw_coulomb.hh
M		extra_packages/traction-at-split-node-contact/src/ntn_contact/friction_laws/ntn_friclaw_linear_cohesive.hh
M		extra_packages/traction-at-split-node-contact/src/ntn_contact/friction_laws/ntn_friclaw_linear_slip_weakening.hh
M		extra_packages/traction-at-split-node-contact/src/ntn_contact/friction_laws/ntn_friclaw_linear_slip_weakening_no_healing.hh
M		extra_packages/traction-at-split-node-contact/src/ntn_contact/friction_regularisations/ntn_fricreg_no_regularisation.hh
M		extra_packages/traction-at-split-node-contact/src/ntn_contact/friction_regularisations/ntn_fricreg_rubin_ampuero.hh
M		extra_packages/traction-at-split-node-contact/src/ntn_contact/friction_regularisations/ntn_fricreg_simplified_prakash_clifton.hh
M		extra_packages/traction-at-split-node-contact/src/ntn_contact/mIIasym_contact.hh
M		extra_packages/traction-at-split-node-contact/src/ntn_contact/ntn_base_contact.cc
M		extra_packages/traction-at-split-node-contact/src/ntn_contact/ntn_base_contact.hh
M		extra_packages/traction-at-split-node-contact/src/ntn_contact/ntn_base_friction.cc
M		extra_packages/traction-at-split-node-contact/src/ntn_contact/ntn_base_friction.hh
M		extra_packages/traction-at-split-node-contact/src/ntn_contact/ntn_contact.cc
M		extra_packages/traction-at-split-node-contact/src/ntn_contact/ntn_contact.hh
M		extra_packages/traction-at-split-node-contact/src/ntn_contact/ntn_friction.hh
M		extra_packages/traction-at-split-node-contact/src/ntn_contact/ntrf_contact.hh
M		extra_packages/traction-at-split-node-contact/src/ntn_contact/ntrf_friction.hh
M		packages/cgal.cmake
M		packages/cohesive_element.cmake
M		packages/documentation_developer_manual.cmake
M		python/CMakeLists.txt
M		python/akantu/__init__.py
M		python/py_aka_array.hh
M		python/py_aka_common.hh
M		python/py_aka_error.cc
M		python/py_aka_error.hh
M		python/py_akantu.cc
M		python/py_akantu.hh
M		python/py_boundary_conditions.hh
M		python/py_dumpable.cc
M		python/py_dumpable.hh
M		python/py_fe_engine.cc
M		python/py_fe_engine.hh
M		python/py_group_manager.hh
M		python/py_heat_transfer_model.hh
M		python/py_material.cc
M		python/py_material.hh
M		python/py_mesh.cc
M		python/py_mesh.hh
M		python/py_model.cc
M		python/py_model.hh
M		python/py_parser.cc
M		python/py_parser.hh
M		python/py_solid_mechanics_model.cc
M		python/py_solid_mechanics_model.hh
M		python/py_solid_mechanics_model_cohesive.cc
M		python/py_solid_mechanics_model_cohesive.hh
A		python/py_solver.cc
A		python/py_solver.hh
M		src/CMakeLists.txt
M		src/common/aka_array.cc
M		src/common/aka_array.hh
M		src/common/aka_array_printer.hh
M		src/common/aka_array_tmpl.hh
M		src/common/aka_bbox.hh
M		src/common/aka_blas_lapack.hh
M		src/common/aka_circular_array.hh
M		src/common/aka_common.cc
M		src/common/aka_common.hh
M		src/common/aka_common_inline_impl.hh
M		src/common/aka_config.hh.in
M		src/common/aka_csr.hh
M		src/common/aka_element_classes_info.hh.in
M		src/common/aka_element_classes_info_inline_impl.hh
M		src/common/aka_enum_macros.hh
M		src/common/aka_error.cc
M		src/common/aka_error.hh
M		src/common/aka_event_handler_manager.hh
M		src/common/aka_extern.cc
M		src/common/aka_factory.hh
M		src/common/aka_fwd.hh
M		src/common/aka_grid_dynamic.hh
M		src/common/aka_math.cc
M		src/common/aka_math.hh
M		src/common/aka_math_tmpl.hh
M		src/common/aka_memory.cc
M		src/common/aka_memory.hh
M		src/common/aka_named_argument.hh
M		src/common/aka_random_generator.hh
M		src/common/aka_safe_enum.hh
M		src/common/aka_static_memory.cc
M		src/common/aka_static_memory.hh
M		src/common/aka_static_memory_inline_impl.hh
M		src/common/aka_typelist.hh
M		src/common/aka_types.hh
M		src/common/aka_visitor.hh
M		src/common/aka_voigthelper.hh
M		src/common/aka_voigthelper_tmpl.hh
M		src/common/aka_warning.hh
M		src/common/aka_warning_restore.hh
M		src/fe_engine/cohesive_element.hh
M		src/fe_engine/element.hh
M		src/fe_engine/element_class.hh
M		src/fe_engine/element_class_structural.hh
M		src/fe_engine/element_class_tmpl.hh
M		src/fe_engine/element_classes/element_class_bernoulli_beam_inline_impl.hh
M		src/fe_engine/element_classes/element_class_hermite_inline_impl.hh
M		src/fe_engine/element_classes/element_class_kirchhoff_shell_inline_impl.hh
M		src/fe_engine/element_classes/element_class_pentahedron_6_inline_impl.hh
M		src/fe_engine/element_classes/element_class_quadrangle_8_inline_impl.hh
M		src/fe_engine/element_classes/element_class_tetrahedron_4_inline_impl.hh
M		src/fe_engine/element_type_conversion.hh
M		src/fe_engine/fe_engine.hh
M		src/fe_engine/fe_engine_inline_impl.hh
M		src/fe_engine/fe_engine_template.hh
M		src/fe_engine/fe_engine_template_cohesive.cc
M		src/fe_engine/fe_engine_template_tmpl.hh
M		src/fe_engine/fe_engine_template_tmpl_field.hh
M		src/fe_engine/fe_engine_template_tmpl_struct.hh
M		src/fe_engine/gauss_integration_tmpl.hh
M		src/fe_engine/integration_point.hh
M		src/fe_engine/integrator.hh
M		src/fe_engine/integrator_gauss.hh
M		src/fe_engine/integrator_gauss_inline_impl.hh
M		src/fe_engine/interpolation_element_tmpl.hh
M		src/fe_engine/shape_cohesive.hh
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M		src/fe_engine/shape_functions.cc
M		src/fe_engine/shape_functions.hh
M		src/fe_engine/shape_functions_inline_impl.hh
M		src/fe_engine/shape_lagrange.hh
M		src/fe_engine/shape_lagrange_base.cc
M		src/fe_engine/shape_lagrange_base.hh
M		src/fe_engine/shape_lagrange_base_inline_impl.hh
M		src/fe_engine/shape_lagrange_inline_impl.hh
M		src/fe_engine/shape_structural.hh
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M		src/geometry/aabb_primitives/aabb_primitive.hh
M		src/geometry/aabb_primitives/line_arc.hh
M		src/geometry/aabb_primitives/tetrahedron.hh
M		src/geometry/aabb_primitives/triangle.hh
M		src/geometry/geom_helper_functions.hh
M		src/geometry/mesh_abstract_intersector.hh
M		src/geometry/mesh_abstract_intersector_tmpl.hh
M		src/geometry/mesh_geom_abstract.hh
M		src/geometry/mesh_geom_common.hh
M		src/geometry/mesh_geom_factory.hh
M		src/geometry/mesh_geom_factory_tmpl.hh
M		src/geometry/mesh_geom_intersector.hh
M		src/geometry/mesh_geom_intersector_tmpl.hh
M		src/geometry/mesh_segment_intersector.hh
M		src/geometry/mesh_segment_intersector_tmpl.hh
M		src/geometry/mesh_sphere_intersector.hh
M		src/geometry/mesh_sphere_intersector_tmpl.hh
M		src/geometry/tree_type_helper.hh
M		src/io/dumper/dumpable.cc
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M		src/io/dumper/dumper_compute.hh
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M		src/io/dumper/dumper_elemental_field.hh
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M		src/io/dumper/dumper_filtered_connectivity.hh
M		src/io/dumper/dumper_generic_elemental_field.hh
M		src/io/dumper/dumper_generic_elemental_field_tmpl.hh
M		src/io/dumper/dumper_homogenizing_field.hh
M		src/io/dumper/dumper_internal_material_field.hh
M		src/io/dumper/dumper_iohelper.cc
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M		src/io/dumper/dumper_iohelper_paraview.cc
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M		src/io/dumper/dumper_material_padders.hh
M		src/io/dumper/dumper_nodal_field.hh
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M		src/io/dumper/dumper_quadrature_point_iterator.hh
M		src/io/dumper/dumper_text.cc
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M		src/io/dumper/dumper_type_traits.hh
M		src/io/dumper/dumper_variable.hh
M		src/io/mesh_io.cc
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M		src/io/mesh_io/mesh_io_diana.cc
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M		src/io/mesh_io/mesh_io_msh.cc
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M		src/io/mesh_io/mesh_io_msh_struct.cc
M		src/io/mesh_io/mesh_io_msh_struct.hh
M		src/io/parser/algebraic_parser.hh
M		src/io/parser/cppargparse/cppargparse.cc
M		src/io/parser/cppargparse/cppargparse.hh
M		src/io/parser/cppargparse/cppargparse_tmpl.hh
M		src/io/parser/input_file_parser.hh
M		src/io/parser/parameter_registry.cc
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M		src/io/parser/parsable.cc
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M		src/io/parser/parser_tmpl.hh
M		src/mesh/element_group.cc
M		src/mesh/element_group.hh
M		src/mesh/element_group_inline_impl.hh
M		src/mesh/element_type_map.cc
M		src/mesh/element_type_map.hh
M		src/mesh/element_type_map_filter.hh
M		src/mesh/element_type_map_tmpl.hh
M		src/mesh/group_manager.cc
M		src/mesh/group_manager.hh
M		src/mesh/group_manager_inline_impl.hh
M		src/mesh/mesh.cc
M		src/mesh/mesh.hh
M		src/mesh/mesh_accessor.hh
M		src/mesh/mesh_data.hh
M		src/mesh/mesh_data_tmpl.hh
M		src/mesh/mesh_events.hh
M		src/mesh/mesh_filter.hh
M		src/mesh/mesh_global_data_updater.hh
M		src/mesh/mesh_inline_impl.hh
M		src/mesh/mesh_iterators.hh
M		src/mesh/mesh_periodic.cc
M		src/mesh/node_group.cc
M		src/mesh/node_group.hh
M		src/mesh/node_group_inline_impl.hh
M		src/mesh_utils/cohesive_element_inserter.cc
M		src/mesh_utils/cohesive_element_inserter.hh
A		src/mesh_utils/cohesive_element_inserter_helper.cc
A		src/mesh_utils/cohesive_element_inserter_helper.hh
M		src/mesh_utils/cohesive_element_inserter_inline_impl.hh
M		src/mesh_utils/global_ids_updater.cc
M		src/mesh_utils/global_ids_updater.hh
M		src/mesh_utils/global_ids_updater_inline_impl.hh
M		src/mesh_utils/mesh_partition.cc
M		src/mesh_utils/mesh_partition.hh
M		src/mesh_utils/mesh_partition/mesh_partition_mesh_data.cc
M		src/mesh_utils/mesh_partition/mesh_partition_mesh_data.hh
M		src/mesh_utils/mesh_partition/mesh_partition_scotch.cc
M		src/mesh_utils/mesh_partition/mesh_partition_scotch.hh
M		src/mesh_utils/mesh_utils.cc
M		src/mesh_utils/mesh_utils.hh
M		src/mesh_utils/mesh_utils_distribution.cc
M		src/mesh_utils/mesh_utils_distribution.hh
P		src/mesh_utils/mesh_utils_inline_impl.hh Copied from src/model/heat_transfer/heat_transfer_model_inline_impl.hh
M		src/mesh_utils/mesh_utils_pbc.cc
M		src/model/common/boundary_condition/boundary_condition.hh
M		src/model/common/boundary_condition/boundary_condition_functor.hh
M		src/model/common/boundary_condition/boundary_condition_functor_inline_impl.hh
M		src/model/common/boundary_condition/boundary_condition_tmpl.hh
M		src/model/common/dof_manager/dof_manager.cc
M		src/model/common/dof_manager/dof_manager.hh
M		src/model/common/dof_manager/dof_manager_default.cc
M		src/model/common/dof_manager/dof_manager_default.hh
P		src/model/common/dof_manager/dof_manager_default_inline_impl.hh Copied to src/synchronizer/facet_synchronizer_inline_impl.hh
M		src/model/common/dof_manager/dof_manager_inline_impl.hh
M		src/model/common/dof_manager/dof_manager_petsc.cc
M		src/model/common/dof_manager/dof_manager_petsc.hh
M		src/model/common/integration_scheme/generalized_trapezoidal.cc
M		src/model/common/integration_scheme/generalized_trapezoidal.hh
M		src/model/common/integration_scheme/integration_scheme.cc
M		src/model/common/integration_scheme/integration_scheme.hh
M		src/model/common/integration_scheme/integration_scheme_1st_order.cc
M		src/model/common/integration_scheme/integration_scheme_1st_order.hh
M		src/model/common/integration_scheme/integration_scheme_2nd_order.hh
M		src/model/common/integration_scheme/newmark-beta.cc
M		src/model/common/integration_scheme/newmark-beta.hh
M		src/model/common/integration_scheme/pseudo_time.cc
M		src/model/common/integration_scheme/pseudo_time.hh
M		src/model/common/model_solver.cc
M		src/model/common/model_solver.hh
M		src/model/common/non_linear_solver/non_linear_solver.cc
M		src/model/common/non_linear_solver/non_linear_solver.hh
M		src/model/common/non_linear_solver/non_linear_solver_default.hh
M		src/model/common/non_linear_solver/non_linear_solver_linear.hh
M		src/model/common/non_linear_solver/non_linear_solver_lumped.cc
M		src/model/common/non_linear_solver/non_linear_solver_lumped.hh
M		src/model/common/non_linear_solver/non_linear_solver_newton_raphson.cc
M		src/model/common/non_linear_solver/non_linear_solver_newton_raphson.hh
M		src/model/common/non_linear_solver/non_linear_solver_petsc.cc
M		src/model/common/non_linear_solver/non_linear_solver_petsc.hh
M		src/model/common/non_local_toolbox/base_weight_function.hh
M		src/model/common/non_local_toolbox/base_weight_function_inline_impl.hh
M		src/model/common/non_local_toolbox/neighborhood_base.cc
M		src/model/common/non_local_toolbox/neighborhood_base.hh
M		src/model/common/non_local_toolbox/neighborhood_base_inline_impl.hh
M		src/model/common/non_local_toolbox/neighborhoods_criterion_evaluation/neighborhood_max_criterion.cc
M		src/model/common/non_local_toolbox/neighborhoods_criterion_evaluation/neighborhood_max_criterion.hh
M		src/model/common/non_local_toolbox/neighborhoods_criterion_evaluation/neighborhood_max_criterion_inline_impl.hh
M		src/model/common/non_local_toolbox/non_local_manager.cc
M		src/model/common/non_local_toolbox/non_local_manager.hh
M		src/model/common/non_local_toolbox/non_local_manager_callback.hh
M		src/model/common/non_local_toolbox/non_local_manager_inline_impl.hh
M		src/model/common/non_local_toolbox/non_local_neighborhood.hh
M		src/model/common/non_local_toolbox/non_local_neighborhood_base.cc
M		src/model/common/non_local_toolbox/non_local_neighborhood_base.hh
M		src/model/common/non_local_toolbox/non_local_neighborhood_inline_impl.hh
M		src/model/common/non_local_toolbox/non_local_neighborhood_tmpl.hh
M		src/model/common/solver_callback.hh
M		src/model/common/time_step_solvers/time_step_solver.cc
M		src/model/common/time_step_solvers/time_step_solver.hh
M		src/model/common/time_step_solvers/time_step_solver_default.cc
M		src/model/common/time_step_solvers/time_step_solver_default.hh
M		src/model/common/time_step_solvers/time_step_solver_default_explicit.hh
M		src/model/heat_transfer/heat_transfer_model.cc
M		src/model/heat_transfer/heat_transfer_model.hh
P		src/model/heat_transfer/heat_transfer_model_inline_impl.hh Copied to src/mesh_utils/mesh_utils_inline_impl.hh
M		src/model/model.cc
M		src/model/model.hh
M		src/model/model_inline_impl.hh
M		src/model/model_options.hh
M		src/model/solid_mechanics/material.cc
M		src/model/solid_mechanics/material.hh
M		src/model/solid_mechanics/material_inline_impl.hh
M		src/model/solid_mechanics/material_selector.hh
M		src/model/solid_mechanics/material_selector_tmpl.hh
M		src/model/solid_mechanics/materials/internal_field.hh
M		src/model/solid_mechanics/materials/internal_field_tmpl.hh
M		src/model/solid_mechanics/materials/material_core_includes.hh
M		src/model/solid_mechanics/materials/material_damage/material_anisotropic_damage.cc
M		src/model/solid_mechanics/materials/material_damage/material_anisotropic_damage.hh
M		src/model/solid_mechanics/materials/material_damage/material_anisotropic_damage_tmpl.hh
M		src/model/solid_mechanics/materials/material_damage/material_damage.hh
M		src/model/solid_mechanics/materials/material_damage/material_damage_non_local.hh
M		src/model/solid_mechanics/materials/material_damage/material_damage_tmpl.hh
M		src/model/solid_mechanics/materials/material_damage/material_marigo.cc
M		src/model/solid_mechanics/materials/material_damage/material_marigo.hh
M		src/model/solid_mechanics/materials/material_damage/material_marigo_inline_impl.hh
M		src/model/solid_mechanics/materials/material_damage/material_marigo_non_local.hh
M		src/model/solid_mechanics/materials/material_damage/material_mazars.hh
M		src/model/solid_mechanics/materials/material_damage/material_mazars_inline_impl.hh
M		src/model/solid_mechanics/materials/material_damage/material_mazars_non_local.cc
M		src/model/solid_mechanics/materials/material_damage/material_mazars_non_local.hh
M		src/model/solid_mechanics/materials/material_elastic.cc
M		src/model/solid_mechanics/materials/material_elastic.hh
M		src/model/solid_mechanics/materials/material_elastic_inline_impl.hh
M		src/model/solid_mechanics/materials/material_elastic_linear_anisotropic.cc
M		src/model/solid_mechanics/materials/material_elastic_linear_anisotropic.hh
M		src/model/solid_mechanics/materials/material_elastic_linear_anisotropic_inline_impl.hh
M		src/model/solid_mechanics/materials/material_elastic_orthotropic.cc
M		src/model/solid_mechanics/materials/material_elastic_orthotropic.hh
M		src/model/solid_mechanics/materials/material_embedded/material_reinforcement.hh
M		src/model/solid_mechanics/materials/material_embedded/material_reinforcement_tmpl.hh
M		src/model/solid_mechanics/materials/material_finite_deformation/material_neohookean.cc
M		src/model/solid_mechanics/materials/material_finite_deformation/material_neohookean.hh
M		src/model/solid_mechanics/materials/material_finite_deformation/material_neohookean_inline_impl.hh
M		src/model/solid_mechanics/materials/material_non_local.hh
M		src/model/solid_mechanics/materials/material_non_local_tmpl.hh
M		src/model/solid_mechanics/materials/material_plastic/material_linear_isotropic_hardening.cc
M		src/model/solid_mechanics/materials/material_plastic/material_linear_isotropic_hardening.hh
M		src/model/solid_mechanics/materials/material_plastic/material_linear_isotropic_hardening_inline_impl.hh
M		src/model/solid_mechanics/materials/material_plastic/material_plastic.cc
M		src/model/solid_mechanics/materials/material_plastic/material_plastic.hh
M		src/model/solid_mechanics/materials/material_thermal.cc
M		src/model/solid_mechanics/materials/material_thermal.hh
M		src/model/solid_mechanics/materials/material_viscoelastic/material_standard_linear_solid_deviatoric.cc
M		src/model/solid_mechanics/materials/material_viscoelastic/material_standard_linear_solid_deviatoric.hh
M		src/model/solid_mechanics/materials/material_viscoelastic/material_viscoelastic_maxwell.cc
M		src/model/solid_mechanics/materials/material_viscoelastic/material_viscoelastic_maxwell.hh
M		src/model/solid_mechanics/materials/plane_stress_toolbox.hh
M		src/model/solid_mechanics/materials/plane_stress_toolbox_tmpl.hh
M		src/model/solid_mechanics/materials/random_internal_field.hh
M		src/model/solid_mechanics/materials/random_internal_field_tmpl.hh
M		src/model/solid_mechanics/materials/weight_functions/damaged_weight_function.hh
M		src/model/solid_mechanics/materials/weight_functions/remove_damaged_weight_function.hh
M		src/model/solid_mechanics/materials/weight_functions/remove_damaged_weight_function_inline_impl.hh
M		src/model/solid_mechanics/materials/weight_functions/remove_damaged_with_damage_rate_weight_function.hh
M		src/model/solid_mechanics/materials/weight_functions/remove_damaged_with_damage_rate_weight_function_inline_impl.hh
M		src/model/solid_mechanics/materials/weight_functions/stress_based_weight_function.hh
M		src/model/solid_mechanics/materials/weight_functions/stress_based_weight_function_inline_impl.hh
M		src/model/solid_mechanics/solid_mechanics_model.cc
M		src/model/solid_mechanics/solid_mechanics_model.hh
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/fragment_manager.cc
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/fragment_manager.hh
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/material_selector_cohesive.cc
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/material_selector_cohesive.hh
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/cohesive_internal_field.hh
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/cohesive_internal_field_tmpl.hh
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_bilinear.cc
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_bilinear.hh
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_exponential.cc
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_exponential.hh
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_linear.cc
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_linear.hh
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_linear_fatigue.cc
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_linear_fatigue.hh
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_linear_friction.cc
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_linear_friction.hh
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_linear_inline_impl.hh
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_linear_uncoupled.cc
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_linear_uncoupled.hh
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/material_cohesive.cc
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/material_cohesive.hh
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/solid_mechanics_model_cohesive.cc
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/solid_mechanics_model_cohesive.hh
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/solid_mechanics_model_cohesive_inline_impl.hh
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/solid_mechanics_model_cohesive_parallel.cc
M		src/model/solid_mechanics/solid_mechanics_model_embedded_interface/embedded_interface_intersector.cc
M		src/model/solid_mechanics/solid_mechanics_model_embedded_interface/embedded_interface_intersector.hh
M		src/model/solid_mechanics/solid_mechanics_model_embedded_interface/embedded_interface_model.cc
M		src/model/solid_mechanics/solid_mechanics_model_embedded_interface/embedded_interface_model.hh
M		src/model/solid_mechanics/solid_mechanics_model_event_handler.hh
M		src/model/solid_mechanics/solid_mechanics_model_inline_impl.hh
M		src/model/solid_mechanics/solid_mechanics_model_io.cc
M		src/model/solid_mechanics/solid_mechanics_model_mass.cc
M		src/model/solid_mechanics/solid_mechanics_model_material.cc
M		src/model/solid_mechanics/solid_mechanics_model_tmpl.hh
M		src/model/structural_mechanics/structural_elements/structural_element_bernoulli_beam_2.hh
M		src/model/structural_mechanics/structural_elements/structural_element_bernoulli_beam_3.hh
M		src/model/structural_mechanics/structural_elements/structural_element_kirchhoff_shell.hh
M		src/model/structural_mechanics/structural_mechanics_model.cc
M		src/model/structural_mechanics/structural_mechanics_model.hh
M		src/model/structural_mechanics/structural_mechanics_model_inline_impl.hh
M		src/model/structural_mechanics/structural_mechanics_model_mass.cc
M		src/solver/petsc_wrapper.hh
M		src/solver/solver_petsc.cc
P		src/solver/solver_petsc.hh Copied from src/synchronizer/dof_synchronizer.hh
M		src/solver/solver_vector.hh
M		src/solver/solver_vector_default.hh
M		src/solver/solver_vector_default_tmpl.hh
M		src/solver/solver_vector_distributed.hh
M		src/solver/solver_vector_petsc.cc
M		src/solver/solver_vector_petsc.hh
M		src/solver/sparse_matrix.hh
M		src/solver/sparse_matrix_aij.cc
M		src/solver/sparse_matrix_aij.hh
M		src/solver/sparse_matrix_aij_inline_impl.hh
M		src/solver/sparse_matrix_petsc.cc
M		src/solver/sparse_matrix_petsc.hh
M		src/solver/sparse_solver.hh
M		src/solver/sparse_solver_mumps.cc
M		src/solver/sparse_solver_mumps.hh
M		src/solver/terms_to_assemble.hh
M		src/synchronizer/communication_buffer.hh
M		src/synchronizer/communication_buffer_inline_impl.hh
M		src/synchronizer/communication_descriptor.hh
M		src/synchronizer/communication_descriptor_tmpl.hh
M		src/synchronizer/communication_request.hh
M		src/synchronizer/communication_tag.hh
M		src/synchronizer/communications.hh
M		src/synchronizer/communications_tmpl.hh
M		src/synchronizer/communicator.cc
M		src/synchronizer/communicator.hh
M		src/synchronizer/communicator_dummy_inline_impl.hh
M		src/synchronizer/communicator_event_handler.hh
M		src/synchronizer/communicator_inline_impl.hh
M		src/synchronizer/communicator_mpi_inline_impl.hh
M		src/synchronizer/data_accessor.cc
M		src/synchronizer/data_accessor.hh
M		src/synchronizer/dof_synchronizer.cc
P		src/synchronizer/dof_synchronizer.hh Copied to src/solver/solver_petsc.hh
M		src/synchronizer/dof_synchronizer_inline_impl.hh
M		src/synchronizer/element_info_per_processor.cc
M		src/synchronizer/element_info_per_processor.hh
M		src/synchronizer/element_info_per_processor_tmpl.hh
M		src/synchronizer/element_synchronizer.cc
M		src/synchronizer/element_synchronizer.hh
M		src/synchronizer/facet_synchronizer.cc
M		src/synchronizer/facet_synchronizer.hh
P		src/synchronizer/facet_synchronizer_inline_impl.hh Copied from src/model/common/dof_manager/dof_manager_default_inline_impl.hh
M		src/synchronizer/grid_synchronizer.cc
M		src/synchronizer/grid_synchronizer.hh
M		src/synchronizer/grid_synchronizer_tmpl.hh
M		src/synchronizer/master_element_info_per_processor.cc
M		src/synchronizer/mpi_communicator_data.hh
M		src/synchronizer/node_info_per_processor.cc
M		src/synchronizer/node_info_per_processor.hh
M		src/synchronizer/node_synchronizer.cc
M		src/synchronizer/node_synchronizer.hh
M		src/synchronizer/node_synchronizer_inline_impl.hh
M		src/synchronizer/periodic_node_synchronizer.cc
M		src/synchronizer/periodic_node_synchronizer.hh
M		src/synchronizer/slave_element_info_per_processor.cc
M		src/synchronizer/synchronizer.cc
M		src/synchronizer/synchronizer.hh
M		src/synchronizer/synchronizer_impl.hh
M		src/synchronizer/synchronizer_impl_tmpl.hh
M		src/synchronizer/synchronizer_registry.hh
M		src/synchronizer/synchronizer_tmpl.hh
D		test/ci/debian.testing
D		test/ci/debian.testing/Dockerfile
A	(dir)	test/ci/debian:testing/
A	(dir)	test/ci/debian:testing/.openmpi/
A		test/ci/debian:testing/.openmpi/mca-params.conf
A		test/ci/debian:testing/Dockerfile
A	(dir)	test/ci/phabricator/
A	(dir)	test/ci/phabricator/.openmpi/
A		test/ci/phabricator/.openmpi/mca-params.conf
A		test/ci/phabricator/Dockerfile
D		test/ci/ubuntu.lts
D		test/ci/ubuntu.lts/Dockerfile
A	(dir)	test/ci/ubuntu:lts/
A	(dir)	test/ci/ubuntu:lts/.openmpi/
A		test/ci/ubuntu:lts/.openmpi/mca-params.conf
A		test/ci/ubuntu:lts/Dockerfile
M		test/test_common/CMakeLists.txt
M		test/test_common/test_array.cc
D		test/test_common/test_iterators.cc
M		test/test_common/test_tensors.cc
M		test/test_common/test_voigt_helper.cc
M		test/test_fe_engine/CMakeLists.txt
M		test/test_fe_engine/py_engine/py_engine.py
M		test/test_fe_engine/test_fe_engine_fixture.hh
M		test/test_fe_engine/test_fe_engine_gauss_integration.cc
M		test/test_fe_engine/test_fe_engine_precomputation.cc
M		test/test_fe_engine/test_fe_engine_structural_fixture.hh
M		test/test_gtest_utils.hh
M		test/test_mesh_utils/test_buildfacets/test_buildfacets_pentahedron_15.cc
M		test/test_mesh_utils/test_buildfacets/test_buildfacets_pentahedron_6.cc
M		test/test_model/patch_tests/CMakeLists.txt
P		test/test_model/patch_tests/patch_test_linear_anisotropic.cc Deleted after being copied to multiple locations: test/test_model/patch_tests/patch_test_linear_anisotropic_explicit.cc test/test_model/patch_tests/patch_test_linear_anisotropic_implicit.cc
P		test/test_model/patch_tests/patch_test_linear_anisotropic_explicit.cc Copied from test/test_model/patch_tests/patch_test_linear_anisotropic.cc
V		test/test_model/patch_tests/{patch_test_linear_anisotropic_implicit.cc ← patch_test_linear_anisotropic.cc}
M		test/test_model/patch_tests/patch_test_linear_elastic_explicit.cc
M		test/test_model/patch_tests/patch_test_linear_fixture.hh
M		test/test_model/patch_tests/patch_test_linear_fixture.py
M		test/test_model/patch_tests/patch_test_linear_heat_transfer_fixture.hh
M		test/test_model/patch_tests/patch_test_linear_solid_mechanics_fixture.hh
M		test/test_model/patch_tests/test_lumped_mass.cc
M		test/test_model/patch_tests/test_patch_linear_elastic_explicit.py
M		test/test_model/test_common/test_dof_manager.cc
M		test/test_model/test_common/test_model_solver/test_dof_manager_default.cc
M		test/test_model/test_common/test_model_solver/test_model_solver_dynamic.cc
M		test/test_model/test_common/test_model_solver/test_model_solver_dynamic_petsc.cc
M		test/test_model/test_common/test_model_solver/test_model_solver_my_model.hh
M		test/test_model/test_common/test_non_local_toolbox/my_model.hh
M		test/test_model/test_common/test_non_local_toolbox/plate.geo
M		test/test_model/test_common/test_non_local_toolbox/test_build_neighborhood_parallel.cc
M		test/test_model/test_common/test_non_local_toolbox/test_material.hh
M		test/test_model/test_common/test_non_local_toolbox/test_material_damage.hh
M		test/test_model/test_common/test_non_local_toolbox/test_non_local_averaging.cc
M		test/test_model/test_common/test_non_local_toolbox/test_pair_computation.cc
M		test/test_model/test_common/test_non_local_toolbox/test_remove_damage_weight_function.cc
M		test/test_model/test_solid_mechanics_model/CMakeLists.txt
M		test/test_model/test_solid_mechanics_model/test_cohesive/test_cohesive_extrinsic/test_cohesive_extrinsic_fatigue.cc
M		test/test_model/test_solid_mechanics_model/test_cohesive/test_cohesive_fixture.hh
M		test/test_model/test_solid_mechanics_model/test_cohesive/test_cohesive_insertion/test_cohesive_insertion_along_physical_surfaces.cc
M		test/test_model/test_solid_mechanics_model/test_cohesive/test_cohesive_intrinsic/test_cohesive_intrinsic.cc
M		test/test_model/test_solid_mechanics_model/test_cohesive/test_cohesive_intrinsic/test_cohesive_intrinsic_quadrangle.cc
M		test/test_model/test_solid_mechanics_model/test_cohesive/test_cohesive_intrinsic/test_cohesive_intrinsic_tetrahedron.cc
M		test/test_model/test_solid_mechanics_model/test_cohesive/test_cohesive_intrinsic/test_cohesive_intrinsic_tetrahedron_fragmentation.cc
M		test/test_model/test_solid_mechanics_model/test_cohesive/test_materials/test_material_cohesive_fixture.hh
M		test/test_model/test_solid_mechanics_model/test_cohesive/test_materials/test_material_cohesive_linear.cc
M		test/test_model/test_solid_mechanics_model/test_cohesive/test_parallel_cohesive/test_cohesive_parallel_buildfragments/test_cohesive_parallel_buildfragments.cc
M		test/test_model/test_solid_mechanics_model/test_cohesive/test_parallel_cohesive/test_cohesive_parallel_intrinsic/test_cohesive_parallel_intrinsic_tetrahedron.cc
M		test/test_model/test_solid_mechanics_model/test_embedded_interface/test_embedded_interface_model_prestress.cc
M		test/test_model/test_solid_mechanics_model/test_energies/test_solid_mechanics_model_work_dynamics.cc
M		test/test_model/test_solid_mechanics_model/test_energies/test_solid_mechanics_model_work_quasistatic.cc
M		test/test_model/test_solid_mechanics_model/test_materials/CMakeLists.txt
M		test/test_model/test_solid_mechanics_model/test_materials/local_material_damage.hh
M		test/test_model/test_solid_mechanics_model/test_materials/test_damage_materials.cc
M		test/test_model/test_solid_mechanics_model/test_materials/test_elastic_materials.cc
M		test/test_model/test_solid_mechanics_model/test_materials/test_finite_def_materials.cc
M		test/test_model/test_solid_mechanics_model/test_materials/test_finite_deformation.cc
M		test/test_model/test_solid_mechanics_model/test_materials/test_interpolate_stress.cc
M		test/test_model/test_solid_mechanics_model/test_materials/test_material_elasto_plastic_linear_isotropic_hardening/CMakeLists.txt
M		test/test_model/test_solid_mechanics_model/test_materials/test_material_non_local/custom_non_local_test_material.hh
M		test/test_model/test_solid_mechanics_model/test_materials/test_material_thermal.cc
M		test/test_model/test_solid_mechanics_model/test_materials/test_plastic_materials.cc
M		test/test_model/test_solid_mechanics_model/test_solid_mechanics_model_dynamics.cc
M		test/test_model/test_solid_mechanics_model/test_solid_mechanics_model_fixture.hh
M		test/test_model/test_solid_mechanics_model/test_solid_mechanics_model_material_large_rotation.cc
M		test/test_model/test_structural_mechanics_model/test_structural_mechanics_model_bernoulli_beam_3.cc
M		test/test_model/test_structural_mechanics_model/test_structural_mechanics_model_bernoulli_beam_dynamics.cc
M		test/test_model/test_structural_mechanics_model/test_structural_mechanics_model_discrete_kirchhoff_triangle_18.cc
M		test/test_model/test_structural_mechanics_model/test_structural_mechanics_model_fixture.hh
M		test/test_python_interface/CMakeLists.txt
M		test/test_python_interface/test_common.cc
M		test/test_python_interface/test_pybind.py
M		test/test_synchronizer/test_communicator.cc
M		third-party/iohelper/src/base64.hh
M		third-party/iohelper/src/container_array.hh
M		third-party/iohelper/src/dumper.cc
M		third-party/iohelper/src/dumper.hh
M		third-party/iohelper/src/dumper_C_wrapper.cc
M		third-party/iohelper/src/dumper_lammps.cc
M		third-party/iohelper/src/dumper_lammps.hh
M		third-party/iohelper/src/dumper_paraview.cc
M		third-party/iohelper/src/dumper_paraview.hh
M		third-party/iohelper/src/dumper_restart.cc
M		third-party/iohelper/src/dumper_restart.hh
M		third-party/iohelper/src/dumper_text.cc
M		third-party/iohelper/src/dumper_text.hh
M		third-party/iohelper/src/field.cc
M		third-party/iohelper/src/field.hh
M		third-party/iohelper/src/field_inline_impl.hh
M		third-party/iohelper/src/field_interface.hh
M		third-party/iohelper/src/file_manager.hh
M		third-party/iohelper/src/iohelper_common.hh
M		third-party/iohelper/src/paraview_helper.cc
M		third-party/iohelper/src/paraview_helper.hh
M		third-party/iohelper/src/paraview_helper.tcc
M		third-party/iohelper/src/reader.cc
M		third-party/iohelper/src/reader.hh
M		third-party/iohelper/src/reader_restart.cc
M		third-party/iohelper/src/reader_restart.hh
M		third-party/iohelper/src/variable.cc
M		third-party/iohelper/src/variable.hh
M		third-party/iohelper/src/variable_inline_impl.hh
M		third-party/iohelper/src/variable_interface.hh
M		third-party/iohelper/src/visitor.hh
M		third-party/iohelper/test/mesh_io_msh.hh