Diffusion akantu fa1e26680167

Merge branch 'master' into features/contact
fa1e26680167
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Authored by pundir on Oct 12 2018, 18:28.

Description

Merge branch 'master' into features/contact

Details

Committed

pundir

Oct 12 2018, 18:28

Pushed

gitlab-richart

Jul 29 2021, 09:01

Parents

rAKA19368095d709: Correcting the bug of insertion finite_deformation and dump (again)
rAKA9add43fad52c: working

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Event Timeline

pundir committed rAKAfa1e26680167: Merge branch 'master' into features/contact (authored by pundir).Oct 12 2018, 18:28

Merged Changes

Commit	Author	Details	Committed
19368095d709	richart	Correcting the bug of insertion finite_deformation and dump (again)	Oct 12 2018
057a7338660e	richart	Merge branch 'features/pbc'	Oct 10 2018
b2c7ec465ed6	richart	correcting mesh_io_msh nodedata	Oct 9 2018
dbae85499748	richart	make periodic debugging	Sep 5 2018
b2e3aaf7f89b	richart	Making compilation work with gcc >= 8	Sep 5 2018
df0bceaf33e6	richart	commit to push before vacations: this version is currently broken	Jul 19 2018
97c250077a6f	richart	Implementing missing function fir makePeriodic	Jun 19 2018
970b5eee332a	richart	Add google-benchmark for benchmarking	Jun 19 2018
5d088de0cac9	richart/gallyamov	Rewrote the equation numbers to work properly with pbc	Jun 19 2018
0c2653c85209	• arichart	minor improvements	Jun 17 2018
89a6a203b0c1	• arichart	make it compile in sequential too	Jun 17 2018
8ff085b0617c	• arichart	Fix for nodeflag change	Jun 17 2018
7f7fb9d7fe04	• arichart	Bug fix if periodic mesh have more than one dof per node	Jun 17 2018
d8067ee3265f	richart	Initialize the is_periodic variable	Jun 15 2018
74090d0c5422	richart	Pre-working stage for PBC:	Jun 15 2018
92000a4400f5	richart	Multiple changes in order to start implementation of periodicity	May 30 2018
829e86f18d5a	richart	adding debug info in makePeriodic	Apr 17 2018
f2e358ff7e23	richart	Syntax error in mesh.cc DEBUG_ERROR -> ERROR	Apr 9 2018
4ed50ad78b68	richart	NodeType becomes NodeFlags + node_prank	Apr 4 2018
1daea34db5dd	richart	Adding BBox	Apr 4 2018
b2b9387f4a4e	richart	correction in DynamicCommunicationBuffer	Apr 4 2018
187bef675a45	richart	namespace correction	Apr 4 2018
ed2ec79ed3bf	richart	order correction in tensors	Apr 4 2018
c8b80ad5c3a6	richart	adding a mesh makePeriodic function	Apr 4 2018
9f53e5ba4507	richart	spacial direction ?	Apr 4 2018
7c6df5f55619	richart	Adding a full blown object to treat bounding boxes	Apr 4 2018
3389fd9864c6	richart	Adding functionality for periodicity in the mesh	Apr 4 2018
bc98d2c6a6f3	richart	Cleaning the pbc	Apr 4 2018

Changes (101)
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		Path
M		CMakeLists.txt
M		cmake/AkantuExtraCompilationProfiles.cmake
M		examples/explicit/explicit_dynamic.cc
M		extra_packages/igfem/src/integrator_gauss_igfem_inline_impl.cc
M		extra_packages/igfem/src/material_igfem/material_igfem_elastic.cc
M		extra_packages/igfem/src/mesh_igfem_spherical_growing_gel_tmpl.hh
M		extra_packages/igfem/test/test_fe_engine/igfem_mesh_generation.cc
M		packages/core.cmake
A		packages/google-benchmark.cmake
M		packages/pythonlibs.cmake
M		python/swig/aka_array.i
M		python/swig/aka_common.i
M		python/swig/mesh.i
M		python/swig/solid_mechanics_model.i
M		src/common/aka_array.cc
M		src/common/aka_array.hh
M		src/common/aka_array_tmpl.hh
A		src/common/aka_bbox.hh
M		src/common/aka_common.hh
M		src/common/aka_common_inline_impl.cc
M		src/common/aka_csr.hh
M		src/common/aka_error.cc
M		src/common/aka_math_tmpl.hh
M		src/common/aka_random_generator.hh
M		src/common/aka_types.hh
M		src/io/dumper/dumper_element_partition.hh
M		src/io/dumper/dumper_iohelper.cc
M		src/io/dumper/dumper_text.cc
M		src/io/mesh_io/mesh_io_msh.cc
M		src/mesh/mesh.cc
M		src/mesh/mesh.hh
M		src/mesh/mesh_accessor.hh
M		src/mesh/mesh_inline_impl.cc
A		src/mesh/mesh_periodic.cc
M		src/mesh_utils/global_ids_updater.cc
M		src/mesh_utils/global_ids_updater.hh
M		src/mesh_utils/global_ids_updater_inline_impl.cc
M		src/mesh_utils/mesh_partition.cc
M		src/mesh_utils/mesh_partition.hh
M		src/mesh_utils/mesh_partition/mesh_partition_mesh_data.cc
M		src/mesh_utils/mesh_partition/mesh_partition_mesh_data.hh
M		src/mesh_utils/mesh_partition/mesh_partition_scotch.cc
M		src/mesh_utils/mesh_partition/mesh_partition_scotch.hh
M		src/mesh_utils/mesh_utils.cc
M		src/mesh_utils/mesh_utils_distribution.cc
M		src/model/boundary_condition_functor.hh
M		src/model/dof_manager.cc
M		src/model/dof_manager.hh
M		src/model/dof_manager_default.cc
M		src/model/dof_manager_default.hh
M		src/model/dof_manager_default_inline_impl.cc
M		src/model/model.cc
M		src/model/model.hh
M		src/model/solid_mechanics/materials/material_damage/material_damage_tmpl.hh
M		src/model/solid_mechanics/materials/material_viscoelastic/material_standard_linear_solid_deviatoric.hh
M		src/model/solid_mechanics/solid_mechanics_model.cc
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/material_cohesive.cc
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/solid_mechanics_model_cohesive.cc
M		src/model/solid_mechanics/solid_mechanics_model_cohesive/solid_mechanics_model_cohesive.hh
M		src/model/solid_mechanics/solid_mechanics_model_mass.cc
M		src/model/time_step_solvers/time_step_solver_default.cc
M		src/solver/sparse_matrix_aij.cc
M		src/synchronizer/communication_buffer.hh
M		src/synchronizer/communication_buffer_inline_impl.cc
M		src/synchronizer/communication_tag.hh
M		src/synchronizer/communicator.cc
M		src/synchronizer/communicator.hh
M		src/synchronizer/communicator_mpi_inline_impl.cc
M		src/synchronizer/data_accessor.hh
M		src/synchronizer/dof_synchronizer.hh
M		src/synchronizer/dof_synchronizer_inline_impl.cc
M		src/synchronizer/element_info_per_processor.cc
M		src/synchronizer/element_info_per_processor.hh
M		src/synchronizer/element_synchronizer.cc
M		src/synchronizer/element_synchronizer.hh
M		src/synchronizer/grid_synchronizer.cc
M		src/synchronizer/node_info_per_processor.cc
M		src/synchronizer/node_info_per_processor.hh
M		src/synchronizer/node_synchronizer.cc
M		src/synchronizer/node_synchronizer.hh
A		src/synchronizer/periodic_node_synchronizer.cc
A		src/synchronizer/periodic_node_synchronizer.hh
M		src/synchronizer/synchronizer_impl.hh
M		src/synchronizer/synchronizer_impl_tmpl.hh
M		test/CMakeLists.txt
M		test/test_common/test_array.cc
A	(dir)	test/test_mesh/
A		test/test_mesh/CMakeLists.txt
A		test/test_mesh/cube_periodic.geo
A		test/test_mesh/square_periodic.geo
A		test/test_mesh/test_mesh_periodic.cc
M		test/test_model/test_model_solver/test_model_solver.cc
M		test/test_model/test_model_solver/test_model_solver_dynamic.cc
M		test/test_model/test_model_solver/test_model_solver_my_model.hh
M		test/test_solver/test_sparse_solver_mumps.cc
M		test/test_synchronizer/test_data_distribution.cc
M		test/test_synchronizer/test_synchronizers_fixture.hh
A		third-party/cmake/gbenchmark.cmake
A		third-party/gbenchmark.cmake.in
M		third-party/iohelper/src/iohelper_common.hh
M		third-party/iohelper/src/paraview_helper.tcc