Added sequence-dependent stacking and base-pairing strength
12fe614ddf58
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Authored by Oliver Henrich <ohenrich@users.norepy.github.com> on Sep 5 2017, 11:48.

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Added sequence-dependent stacking and base-pairing strength

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Oliver Henrich <ohenrich@users.norepy.github.com>

Sep 5 2017, 11:48

Pushed

junge

Oct 19 2017, 09:53

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Oliver Henrich <ohenrich@users.norepy.github.com> committed rLAMMPS12fe614ddf58: Added sequence-dependent stacking and base-pairing strength (authored by Oliver Henrich <ohenrich@users.norepy.github.com>).Sep 5 2017, 11:48

				Path
	M			doc/src/PDF/USER-CGDNA-overview.pdf
	M			doc/src/pair_oxdna.txt
	M			doc/src/pair_oxdna2.txt
	M			examples/USER/cgdna/examples/oxDNA/duplex1/input.duplex1
	M			examples/USER/cgdna/examples/oxDNA/duplex1/log.24Mar17.duplex1.g++.1
	M			examples/USER/cgdna/examples/oxDNA/duplex1/log.24Mar17.duplex1.g++.4
	M			examples/USER/cgdna/examples/oxDNA/duplex2/input.duplex2
	M			examples/USER/cgdna/examples/oxDNA/duplex2/log.24Mar17.duplex2.g++.1
	M			examples/USER/cgdna/examples/oxDNA/duplex2/log.24Mar17.duplex2.g++.4
	M			examples/USER/cgdna/examples/oxDNA2/duplex1/input.duplex1
	M			examples/USER/cgdna/examples/oxDNA2/duplex1/log.24Mar17.duplex1.g++.1
	M			examples/USER/cgdna/examples/oxDNA2/duplex1/log.24Mar17.duplex1.g++.4
	M			examples/USER/cgdna/examples/oxDNA2/duplex2/input.duplex2
	M			examples/USER/cgdna/examples/oxDNA2/duplex2/log.24Mar17.duplex2.g++.1
	M			examples/USER/cgdna/examples/oxDNA2/duplex2/log.24Mar17.duplex2.g++.4
	M			src/USER-CGDNA/pair_oxdna_hbond.cpp
	M			src/USER-CGDNA/pair_oxdna_hbond.h
	M			src/USER-CGDNA/pair_oxdna_stk.cpp
	M			src/USER-CGDNA/pair_oxdna_stk.h