Kokkos lib update
236ebf7fabbb
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Authored by Steve Plimpton <sjplimp@sandia.gov> on Sep 8 2016, 21:56.

Description

Kokkos lib update

Details

Committed

Steve Plimpton <sjplimp@sandia.gov>

Sep 8 2016, 21:56

Pushed

junge

Oct 19 2017, 09:53

Parents

rLAMMPS0252347d43c5: sync with 7Sep16 patch

Branches

Unknown

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Event Timeline

Steve Plimpton <sjplimp@sandia.gov> committed rLAMMPS236ebf7fabbb: Kokkos lib update (authored by Steve Plimpton <sjplimp@sandia.gov>).Sep 8 2016, 21:56

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		Path
M		lib/kokkos/CMakeLists.txt
M		lib/kokkos/Makefile.kokkos
M		lib/kokkos/Makefile.targets
M		lib/kokkos/README
M		lib/kokkos/algorithms/src/Kokkos_Random.hpp
M		lib/kokkos/algorithms/unit_tests/TestRandom.hpp
A	(dir)	lib/kokkos/cmake/deps/
A		lib/kokkos/cmake/deps/CUDA.cmake
A		lib/kokkos/cmake/deps/CUSPARSE.cmake
A		lib/kokkos/cmake/deps/HWLOC.cmake
A		lib/kokkos/cmake/deps/Pthread.cmake
A		lib/kokkos/cmake/deps/QTHREAD.cmake
A		lib/kokkos/cmake/tribits.cmake
A		lib/kokkos/config/kokkos-trilinos-integration-procedure.txt
A		lib/kokkos/config/master_history.txt
M		lib/kokkos/config/nvcc_wrapper
M		lib/kokkos/config/test_all_sandia
M		lib/kokkos/containers/performance_tests/CMakeLists.txt
M		lib/kokkos/containers/performance_tests/TestCuda.cpp
A		lib/kokkos/containers/performance_tests/TestDynRankView.hpp
M		lib/kokkos/containers/performance_tests/TestGlobal2LocalIds.hpp
M		lib/kokkos/containers/performance_tests/TestOpenMP.cpp
M		lib/kokkos/containers/performance_tests/TestThreads.cpp
M		lib/kokkos/containers/performance_tests/TestUnorderedMapPerformance.hpp
M		lib/kokkos/containers/src/Kokkos_DynRankView.hpp
M		lib/kokkos/containers/src/Kokkos_DynamicView.hpp
P		lib/kokkos/containers/src/impl/Kokkos_Bitset_impl.hpp Copied to lib/kokkos/core/src/impl/Kokkos_BitOps.hpp
M		lib/kokkos/containers/unit_tests/TestDynViewAPI.hpp
M		lib/kokkos/containers/unit_tests/TestDynamicView.hpp
M		lib/kokkos/core/cmake/KokkosCore_config.h.in
M		lib/kokkos/core/perf_test/CMakeLists.txt
M		lib/kokkos/core/perf_test/PerfTestCuda.cpp
M		lib/kokkos/core/perf_test/PerfTestGramSchmidt.hpp
M		lib/kokkos/core/perf_test/PerfTestHexGrad.hpp
M		lib/kokkos/core/perf_test/test_atomic.cpp
M		lib/kokkos/core/src/Cuda/Kokkos_CudaExec.hpp
M		lib/kokkos/core/src/Cuda/Kokkos_CudaSpace.cpp
M		lib/kokkos/core/src/Cuda/Kokkos_Cuda_Alloc.hpp
D		lib/kokkos/core/src/Cuda/Kokkos_Cuda_BasicAllocators.cpp
D		lib/kokkos/core/src/Cuda/Kokkos_Cuda_BasicAllocators.hpp
M		lib/kokkos/core/src/Cuda/Kokkos_Cuda_Impl.cpp
M		lib/kokkos/core/src/Cuda/Kokkos_Cuda_Internal.hpp
M		lib/kokkos/core/src/Cuda/Kokkos_Cuda_Parallel.hpp
M		lib/kokkos/core/src/Cuda/Kokkos_Cuda_ReduceScan.hpp
A		lib/kokkos/core/src/Cuda/Kokkos_Cuda_Task.cpp
A		lib/kokkos/core/src/Cuda/Kokkos_Cuda_Task.hpp
M		lib/kokkos/core/src/Cuda/Kokkos_Cuda_TaskPolicy.cpp
M		lib/kokkos/core/src/Cuda/Kokkos_Cuda_TaskPolicy.hpp
P		lib/kokkos/core/src/Cuda/Kokkos_Cuda_View.hpp Copied from lib/kokkos/core/src/impl/Kokkos_PhysicalLayout.hpp
A		lib/kokkos/core/src/KokkosExp_MDRangePolicy.hpp
V		lib/kokkos/core/src/{KokkosExp_View.hpp → Kokkos_View.hpp}
M		lib/kokkos/core/src/Kokkos_Complex.hpp
P		lib/kokkos/core/src/Kokkos_Concepts.hpp Copied from lib/kokkos/core/src/impl/Kokkos_MemoryPool.cpp
M		lib/kokkos/core/src/Kokkos_Core.hpp
M		lib/kokkos/core/src/Kokkos_Core_fwd.hpp
M		lib/kokkos/core/src/Kokkos_Cuda.hpp
M		lib/kokkos/core/src/Kokkos_CudaSpace.hpp
M		lib/kokkos/core/src/Kokkos_ExecPolicy.hpp
M		lib/kokkos/core/src/Kokkos_HBWSpace.hpp
M		lib/kokkos/core/src/Kokkos_HostSpace.hpp
M		lib/kokkos/core/src/Kokkos_Macros.hpp
M		lib/kokkos/core/src/Kokkos_MemoryPool.hpp
M		lib/kokkos/core/src/Kokkos_OpenMP.hpp
M		lib/kokkos/core/src/Kokkos_Pair.hpp
M		lib/kokkos/core/src/Kokkos_Parallel.hpp
A		lib/kokkos/core/src/Kokkos_Parallel_Reduce.hpp
M		lib/kokkos/core/src/Kokkos_ScratchSpace.hpp
M		lib/kokkos/core/src/Kokkos_Serial.hpp
M		lib/kokkos/core/src/Kokkos_TaskPolicy.hpp
M		lib/kokkos/core/src/Kokkos_Threads.hpp
V		lib/kokkos/core/src/{Kokkos_View.hpp ← KokkosExp_View.hpp}
M		lib/kokkos/core/src/OpenMP/Kokkos_OpenMP_Parallel.hpp
A		lib/kokkos/core/src/OpenMP/Kokkos_OpenMP_Task.cpp
A		lib/kokkos/core/src/OpenMP/Kokkos_OpenMP_Task.hpp
M		lib/kokkos/core/src/OpenMP/Kokkos_OpenMPexec.cpp
M		lib/kokkos/core/src/OpenMP/Kokkos_OpenMPexec.hpp
M		lib/kokkos/core/src/Qthread/Kokkos_QthreadExec.cpp
M		lib/kokkos/core/src/Qthread/Kokkos_QthreadExec.hpp
M		lib/kokkos/core/src/Qthread/Kokkos_Qthread_Parallel.hpp
M		lib/kokkos/core/src/Qthread/Kokkos_Qthread_TaskPolicy.cpp
M		lib/kokkos/core/src/Qthread/Kokkos_Qthread_TaskPolicy.hpp
M		lib/kokkos/core/src/Qthread/README
M		lib/kokkos/core/src/Threads/Kokkos_ThreadsExec.cpp
M		lib/kokkos/core/src/Threads/Kokkos_ThreadsExec.hpp
M		lib/kokkos/core/src/Threads/Kokkos_ThreadsTeam.hpp
M		lib/kokkos/core/src/Threads/Kokkos_Threads_Parallel.hpp
M		lib/kokkos/core/src/Threads/Kokkos_Threads_TaskPolicy.cpp
M		lib/kokkos/core/src/Threads/Kokkos_Threads_TaskPolicy.hpp
M		lib/kokkos/core/src/impl/KokkosExp_SharedAlloc.hpp
M		lib/kokkos/core/src/impl/KokkosExp_ViewCtor.hpp
M		lib/kokkos/core/src/impl/KokkosExp_ViewMapping.hpp
D		lib/kokkos/core/src/impl/Kokkos_AllocationTracker.cpp
D		lib/kokkos/core/src/impl/Kokkos_AllocationTracker.hpp
A		lib/kokkos/core/src/impl/Kokkos_AnalyzePolicy.hpp
M		lib/kokkos/core/src/impl/Kokkos_Atomic_Compare_Exchange_Strong.hpp
M		lib/kokkos/core/src/impl/Kokkos_Atomic_Exchange.hpp
M		lib/kokkos/core/src/impl/Kokkos_Atomic_Fetch_Add.hpp
M		lib/kokkos/core/src/impl/Kokkos_Atomic_Fetch_Sub.hpp
M		lib/kokkos/core/src/impl/Kokkos_Atomic_Generic.hpp
M		lib/kokkos/core/src/impl/Kokkos_Atomic_View.hpp
D		lib/kokkos/core/src/impl/Kokkos_BasicAllocators.cpp
V		lib/kokkos/core/src/impl/Kokkos_BasicAllocators.hpp
P		lib/kokkos/core/src/impl/Kokkos_BitOps.hpp Copied from lib/kokkos/containers/src/impl/Kokkos_Bitset_impl.hpp
M		lib/kokkos/core/src/impl/Kokkos_Core.cpp
M		lib/kokkos/core/src/impl/Kokkos_FunctorAdapter.hpp
M		lib/kokkos/core/src/impl/Kokkos_HBWSpace.cpp
M		lib/kokkos/core/src/impl/Kokkos_HostSpace.cpp
P		lib/kokkos/core/src/impl/Kokkos_MemoryPool.cpp Deleted after being copied to multiple locations: lib/kokkos/core/src/Kokkos_Concepts.hpp lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp lib/kokkos/core/unit_test/TestDefaultDeviceType_a.cpp
D		lib/kokkos/core/src/impl/Kokkos_MemoryPool_Inline.hpp
P		lib/kokkos/core/src/impl/Kokkos_PhysicalLayout.hpp Copied to lib/kokkos/core/src/Cuda/Kokkos_Cuda_View.hpp
M		lib/kokkos/core/src/impl/Kokkos_Profiling_DeviceInfo.hpp
M		lib/kokkos/core/src/impl/Kokkos_Profiling_Interface.cpp
M		lib/kokkos/core/src/impl/Kokkos_Profiling_Interface.hpp
A		lib/kokkos/core/src/impl/Kokkos_Serial_Task.cpp
A		lib/kokkos/core/src/impl/Kokkos_Serial_Task.hpp
M		lib/kokkos/core/src/impl/Kokkos_Serial_TaskPolicy.cpp
M		lib/kokkos/core/src/impl/Kokkos_Serial_TaskPolicy.hpp
M		lib/kokkos/core/src/impl/Kokkos_Tags.hpp
A		lib/kokkos/core/src/impl/Kokkos_TaskQueue.hpp
A		lib/kokkos/core/src/impl/Kokkos_TaskQueue_impl.hpp
M		lib/kokkos/core/src/impl/Kokkos_Timer.hpp
M		lib/kokkos/core/src/impl/Kokkos_Traits.hpp
M		lib/kokkos/core/src/impl/Kokkos_ViewSupport.hpp
P		lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp Copied from lib/kokkos/core/src/impl/Kokkos_MemoryPool.cpp
M		lib/kokkos/core/unit_test/CMakeLists.txt
M		lib/kokkos/core/unit_test/Makefile
M		lib/kokkos/core/unit_test/TestAggregate.hpp
M		lib/kokkos/core/unit_test/TestAggregateReduction.hpp
D		lib/kokkos/core/unit_test/TestAllocationTracker.cpp
M		lib/kokkos/core/unit_test/TestAtomic.hpp
A		lib/kokkos/core/unit_test/TestAtomicOperations.hpp
M		lib/kokkos/core/unit_test/TestCuda.cpp
P		lib/kokkos/core/unit_test/TestCuda_a.cpp Copied from lib/kokkos/core/unit_test/TestOpenMP_a.cpp
M		lib/kokkos/core/unit_test/TestCuda_b.cpp
M		lib/kokkos/core/unit_test/TestCuda_c.cpp
V		lib/kokkos/core/unit_test/{TestDefaultDeviceTypeInit.cpp → TestDefaultDeviceTypeInit.hpp}
V		lib/kokkos/core/unit_test/{TestDefaultDeviceTypeInit.hpp ← TestDefaultDeviceTypeInit.cpp}
A		lib/kokkos/core/unit_test/TestDefaultDeviceTypeInit_1.cpp
A		lib/kokkos/core/unit_test/TestDefaultDeviceTypeInit_10.cpp
A		lib/kokkos/core/unit_test/TestDefaultDeviceTypeInit_11.cpp
A		lib/kokkos/core/unit_test/TestDefaultDeviceTypeInit_12.cpp
A		lib/kokkos/core/unit_test/TestDefaultDeviceTypeInit_13.cpp
A		lib/kokkos/core/unit_test/TestDefaultDeviceTypeInit_14.cpp
A		lib/kokkos/core/unit_test/TestDefaultDeviceTypeInit_15.cpp
A		lib/kokkos/core/unit_test/TestDefaultDeviceTypeInit_16.cpp
A		lib/kokkos/core/unit_test/TestDefaultDeviceTypeInit_2.cpp
A		lib/kokkos/core/unit_test/TestDefaultDeviceTypeInit_3.cpp
A		lib/kokkos/core/unit_test/TestDefaultDeviceTypeInit_4.cpp
A		lib/kokkos/core/unit_test/TestDefaultDeviceTypeInit_5.cpp
A		lib/kokkos/core/unit_test/TestDefaultDeviceTypeInit_6.cpp
A		lib/kokkos/core/unit_test/TestDefaultDeviceTypeInit_7.cpp
A		lib/kokkos/core/unit_test/TestDefaultDeviceTypeInit_8.cpp
A		lib/kokkos/core/unit_test/TestDefaultDeviceTypeInit_9.cpp
V		lib/kokkos/core/{unit_test/TestDefaultDeviceType_a.cpp ← src/impl/Kokkos_MemoryPool.cpp}
A		lib/kokkos/core/unit_test/TestMDRange.hpp
M		lib/kokkos/core/unit_test/TestMemoryPool.hpp
M		lib/kokkos/core/unit_test/TestOpenMP.cpp
P		lib/kokkos/core/unit_test/TestOpenMP_a.cpp Copied to lib/kokkos/core/unit_test/TestCuda_a.cpp
M		lib/kokkos/core/unit_test/TestOpenMP_b.cpp
M		lib/kokkos/core/unit_test/TestOpenMP_c.cpp
M		lib/kokkos/core/unit_test/TestPolicyConstruction.hpp
M		lib/kokkos/core/unit_test/TestQthread.cpp
M		lib/kokkos/core/unit_test/TestRange.hpp
M		lib/kokkos/core/unit_test/TestReduce.hpp
M		lib/kokkos/core/unit_test/TestSerial.cpp
M		lib/kokkos/core/unit_test/TestTaskPolicy.hpp
M		lib/kokkos/core/unit_test/TestTeam.hpp
M		lib/kokkos/core/unit_test/TestThreads.cpp
M		lib/kokkos/core/unit_test/TestViewAPI.hpp
M		lib/kokkos/example/fenl/CGSolve.hpp
M		lib/kokkos/example/fenl/fenl_functors.hpp
M		lib/kokkos/example/fenl/fenl_impl.hpp
M		lib/kokkos/example/global_2_local_ids/G2L.hpp
M		lib/kokkos/example/ichol/example/example_chol_performance_device.hpp
M		lib/kokkos/example/md_skeleton/main.cpp
M		lib/kokkos/example/multi_fem/Explicit.hpp
M		lib/kokkos/example/multi_fem/Implicit.hpp
M		lib/kokkos/example/multi_fem/Nonlinear.hpp
M		lib/kokkos/example/multi_fem/SparseLinearSystem.hpp
M		lib/kokkos/example/sort_array/CMakeLists.txt
M		lib/kokkos/example/sort_array/sort_array.hpp
M		lib/kokkos/example/tutorial/01_hello_world/Makefile
M		lib/kokkos/example/tutorial/01_hello_world_lambda/Makefile
M		lib/kokkos/example/tutorial/02_simple_reduce/Makefile
M		lib/kokkos/example/tutorial/02_simple_reduce_lambda/Makefile
M		lib/kokkos/example/tutorial/03_simple_view/Makefile
M		lib/kokkos/example/tutorial/03_simple_view_lambda/Makefile
M		lib/kokkos/example/tutorial/04_simple_memoryspaces/Makefile
M		lib/kokkos/example/tutorial/05_simple_atomics/Makefile
M		lib/kokkos/example/tutorial/Advanced_Views/01_data_layouts/Makefile
M		lib/kokkos/example/tutorial/Advanced_Views/01_data_layouts/data_layouts.cpp
M		lib/kokkos/example/tutorial/Advanced_Views/02_memory_traits/Makefile
M		lib/kokkos/example/tutorial/Advanced_Views/02_memory_traits/memory_traits.cpp
M		lib/kokkos/example/tutorial/Advanced_Views/03_subviews/Makefile
M		lib/kokkos/example/tutorial/Advanced_Views/04_dualviews/Makefile
M		lib/kokkos/example/tutorial/Advanced_Views/04_dualviews/dual_view.cpp
M		lib/kokkos/example/tutorial/Advanced_Views/05_NVIDIA_UVM/Makefile
M		lib/kokkos/example/tutorial/Advanced_Views/05_NVIDIA_UVM/uvm_example.cpp
M		lib/kokkos/example/tutorial/Advanced_Views/06_AtomicViews/Makefile
M		lib/kokkos/example/tutorial/Advanced_Views/07_Overlapping_DeepCopy/Makefile
M		lib/kokkos/example/tutorial/Advanced_Views/07_Overlapping_DeepCopy/overlapping_deepcopy.cpp
M		lib/kokkos/example/tutorial/Algorithms/01_random_numbers/Makefile
M		lib/kokkos/example/tutorial/Algorithms/01_random_numbers/random_numbers.cpp
M		lib/kokkos/example/tutorial/Hierarchical_Parallelism/01_thread_teams/Makefile
M		lib/kokkos/example/tutorial/Hierarchical_Parallelism/01_thread_teams_lambda/Makefile
M		lib/kokkos/example/tutorial/Hierarchical_Parallelism/01_thread_teams_lambda/thread_teams_lambda.cpp
M		lib/kokkos/example/tutorial/Hierarchical_Parallelism/02_nested_parallel_for/Makefile
M		lib/kokkos/example/tutorial/Hierarchical_Parallelism/03_vectorization/Makefile
M		lib/kokkos/example/tutorial/Hierarchical_Parallelism/03_vectorization/vectorization.cpp
M		lib/kokkos/example/tutorial/Hierarchical_Parallelism/04_team_scan/Makefile
M		lib/kokkos/example/tutorial/Hierarchical_Parallelism/04_team_scan/team_scan.cpp
M		lib/kokkos/generate_makefile.bash
M		src/MANYBODY/pair_vashishta.cpp
M		src/MANYBODY/pair_vashishta.h
M		src/fix_nve_sphere.cpp
M		src/group.cpp