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Authored by Axel Kohlmeyer <akohlmey@gmail.com> on Aug 23 2017, 13:54.

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remove old moltemplate version

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Axel Kohlmeyer <akohlmey@gmail.com>Aug 23 2017, 13:54
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jungeOct 19 2017, 09:53
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rLAMMPSb11fe2eddb93: Merge pull request #573 from junghans/cmake
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Axel Kohlmeyer <akohlmey@gmail.com> committed rLAMMPS57aafba7c3bd: remove old moltemplate version (authored by Axel Kohlmeyer <akohlmey@gmail.com>).Aug 23 2017, 13:54

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Dtools/moltemplate
Dtools/moltemplate/LICENSE.TXT
Dtools/moltemplate/README.TXT
Dtools/moltemplate/examples
Dtools/moltemplate/examples/README.TXT
Dtools/moltemplate/examples/coarse_grained_examples
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/README.TXT
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/README_run.sh
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/README_setup.sh
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/README_visualize.txt
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/images
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/images/cyclododecane+watMW_t=0ps_LR.jpg
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/images/cyclododecane+watMW_t=400ps_LR.jpg
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/images/cyclododecane+watMW_t=50ps_LR.jpg
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/images/cyclopentane.jpg
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/images/cyclopentane_unrelaxed.jpg
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/images/watMW.jpg
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/moltemplate_files
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/moltemplate_files/README.sh
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/moltemplate_files/cyclododecane.lt
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/moltemplate_files/system.lt
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/moltemplate_files/trappe1998.lt
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/moltemplate_files/version_more_comments
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/moltemplate_files/version_more_comments/system.lt
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/moltemplate_files/watmw.lt
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/run.in.npt
Dtools/moltemplate/examples/coarse_grained_examples/3bodyWater+hydrocarbons_MW+TraPPE/run.in.nvt
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/README.TXT
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/README_run.sh
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/README_setup.sh
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/README_visualize.txt
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/images
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/images/DPPC_martini_LR.jpg
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/images/t=0_after_minimization_LR.jpg
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/images/t=13ns_450K_NVT_LR.jpg
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/images/t=26ns_300K_NPT_LR.jpg
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/images/t=6ns_300K_NPT_LR.jpg
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/images/water_martini_LR.jpg
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/moltemplate_files
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/moltemplate_files/lipid.lt
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/moltemplate_files/system.lt
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/moltemplate_files/water.lt
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/packmol_files
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/packmol_files/README.TXT
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/packmol_files/lipid.xyz
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/packmol_files/mix_lipids+water.inp
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/packmol_files/water.xyz
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/run.in.min
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/run.in.npt
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_formation_PACKMOL/run.in.nvt
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_preformed
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_preformed/README.TXT
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_preformed/README_run.sh
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_preformed/README_setup.sh
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_preformed/README_visualize.txt
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_preformed/images
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_preformed/images/DPPC_martini_LR.jpg
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_preformed/images/t=0_bilayer_preformed_GL_LR.jpg
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_preformed/images/t=4ns_bilayer_preformed_GL_LR.jpg
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_preformed/images/water_martini_LR.jpg
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_preformed/moltemplate_files
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_preformed/moltemplate_files/lipid.lt
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_preformed/moltemplate_files/system.lt
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_preformed/moltemplate_files/water.lt
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_preformed/run.in.min
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_preformed/run.in.npt
Dtools/moltemplate/examples/coarse_grained_examples/MARTINI_examples/DPPC_bilayer_preformed/run.in.nvt
Dtools/moltemplate/examples/coarse_grained_examples/abstract_2bead_heteropolymer
Dtools/moltemplate/examples/coarse_grained_examples/abstract_2bead_heteropolymer/README.TXT
Dtools/moltemplate/examples/coarse_grained_examples/abstract_2bead_heteropolymer/README_run.sh
Dtools/moltemplate/examples/coarse_grained_examples/abstract_2bead_heteropolymer/README_setup.sh
Dtools/moltemplate/examples/coarse_grained_examples/abstract_2bead_heteropolymer/README_visualize.txt
Dtools/moltemplate/examples/coarse_grained_examples/abstract_2bead_heteropolymer/images
Dtools/moltemplate/examples/coarse_grained_examples/abstract_2bead_heteropolymer/images/polymer.png
Dtools/moltemplate/examples/coarse_grained_examples/abstract_2bead_heteropolymer/images/t=0ns.png
Dtools/moltemplate/examples/coarse_grained_examples/abstract_2bead_heteropolymer/images/t=40ns_occ.png
Dtools/moltemplate/examples/coarse_grained_examples/abstract_2bead_heteropolymer/images/t=4ns_occ.png
Dtools/moltemplate/examples/coarse_grained_examples/abstract_2bead_heteropolymer/moltemplate_files
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Dtools/moltemplate/examples/coarse_grained_examples/abstract_random_heteropolymer
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Dtools/moltemplate/examples/coarse_grained_examples/abstract_random_heteropolymer/README_visualize.txt
Dtools/moltemplate/examples/coarse_grained_examples/abstract_random_heteropolymer/images
Dtools/moltemplate/examples/coarse_grained_examples/abstract_random_heteropolymer/images/2bead.jpg
Dtools/moltemplate/examples/coarse_grained_examples/abstract_random_heteropolymer/images/3bead.jpg
Dtools/moltemplate/examples/coarse_grained_examples/abstract_random_heteropolymer/images/random_heteropolymer_30_20_t=0.jpg
Dtools/moltemplate/examples/coarse_grained_examples/abstract_random_heteropolymer/images/random_heteropolymer_30_20_t=700ps.jpg
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Dtools/moltemplate/examples/coarse_grained_examples/abstract_random_heteropolymer/moltemplate_files/monomers.lt
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Dtools/moltemplate/examples/coarse_grained_examples/abstract_random_heteropolymer/moltemplate_files/system.lt
Dtools/moltemplate/examples/coarse_grained_examples/abstract_random_heteropolymer/run.in.nvt
Dtools/moltemplate/examples/coarse_grained_examples/abstract_translocation
Dtools/moltemplate/examples/coarse_grained_examples/abstract_translocation/README.TXT
Dtools/moltemplate/examples/coarse_grained_examples/abstract_translocation/README_run.sh
Dtools/moltemplate/examples/coarse_grained_examples/abstract_translocation/README_setup.sh
Dtools/moltemplate/examples/coarse_grained_examples/abstract_translocation/README_visualize.txt
Dtools/moltemplate/examples/coarse_grained_examples/abstract_translocation/images
Dtools/moltemplate/examples/coarse_grained_examples/abstract_translocation/images/polymer_LR.jpg
Dtools/moltemplate/examples/coarse_grained_examples/abstract_translocation/images/solvent_LR.jpg
Dtools/moltemplate/examples/coarse_grained_examples/abstract_translocation/images/walls+solvent+polymer_t=0.jpg
Dtools/moltemplate/examples/coarse_grained_examples/abstract_translocation/images/walls_LR.jpg
Dtools/moltemplate/examples/coarse_grained_examples/abstract_translocation/moltemplate_files
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Dtools/moltemplate/examples/coarse_grained_examples/abstract_translocation/moltemplate_files/polymer.lt
Dtools/moltemplate/examples/coarse_grained_examples/abstract_translocation/moltemplate_files/solvent.lt
Dtools/moltemplate/examples/coarse_grained_examples/abstract_translocation/moltemplate_files/solvent_single.lt
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Dtools/moltemplate/examples/coarse_grained_examples/chromosome_metaphase_Naumova2013
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Dtools/moltemplate/examples/coarse_grained_examples/chromosome_metaphase_Naumova2013/README_NUCLEAR_VOLUME_FRACTION_ESTIMATE.txt
Dtools/moltemplate/examples/coarse_grained_examples/chromosome_metaphase_Naumova2013/README_run.sh
Dtools/moltemplate/examples/coarse_grained_examples/chromosome_metaphase_Naumova2013/README_setup.sh
Dtools/moltemplate/examples/coarse_grained_examples/chromosome_metaphase_Naumova2013/README_visualize.txt
Dtools/moltemplate/examples/coarse_grained_examples/chromosome_metaphase_Naumova2013/images
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Dtools/moltemplate/examples/coarse_grained_examples/chromosome_metaphase_Naumova2013/images/t=0_before_minimizaion.jpg
Dtools/moltemplate/examples/coarse_grained_examples/chromosome_metaphase_Naumova2013/images/vmd_colorscale_jet.tcl
Dtools/moltemplate/examples/coarse_grained_examples/chromosome_metaphase_Naumova2013/moltemplate_files
Dtools/moltemplate/examples/coarse_grained_examples/chromosome_metaphase_Naumova2013/moltemplate_files/README_how_to_generate_system_lt.sh
Dtools/moltemplate/examples/coarse_grained_examples/chromosome_metaphase_Naumova2013/moltemplate_files/README_length_flexibility_details.txt
Dtools/moltemplate/examples/coarse_grained_examples/chromosome_metaphase_Naumova2013/moltemplate_files/calc_table.sh
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Dtools/moltemplate/examples/coarse_grained_examples/chromosome_metaphase_Naumova2013/moltemplate_files/coords_orig.raw
Dtools/moltemplate/examples/coarse_grained_examples/chromosome_metaphase_Naumova2013/moltemplate_files/generate_system_lt.py
Dtools/moltemplate/examples/coarse_grained_examples/chromosome_metaphase_Naumova2013/moltemplate_files/interpolate_coords.py
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Dtools/moltemplate/examples/coarse_grained_examples/membrane+protein/README_run.sh
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Dtools/moltemplate/examples/coarse_grained_examples/membrane+protein/README_visualize.txt
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Dtools/moltemplate/examples/coarse_grained_examples/membrane+protein/images/membrane+protein_t=0ps_top_LR.jpg
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Dtools/moltemplate/examples/coarse_grained_examples/membrane_BranniganPRE2005
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Dtools/moltemplate/examples/force_field_AMBER
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Dtools/moltemplate/examples/force_field_AMBER/benzene
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Dtools/moltemplate/examples/force_field_AMBER/hexadecane
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Dtools/moltemplate/examples/force_field_AMBER/waterTIP3P+isobutane
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Dtools/moltemplate/examples/force_field_OPLSAA
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Dtools/moltemplate/examples/force_field_OPLSAA/alkane_chain_single
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Dtools/moltemplate/examples/force_field_OPLSAA/alkane_chain_single/images/ch3_ry60.jpg
Dtools/moltemplate/examples/force_field_OPLSAA/alkane_chain_single/images/t=0.jpg
Dtools/moltemplate/examples/force_field_OPLSAA/alkane_chain_single/images/t=1ns.jpg
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Dtools/moltemplate/examples/force_field_OPLSAA/ethylene+benzene
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Dtools/moltemplate/examples/force_field_OPLSAA/ethylene+benzene/images
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Dtools/moltemplate/examples/force_field_OPLSAA/ethylene+benzene/images/ethylene+benzene_box80x80x80_LR.jpg
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Dtools/moltemplate/examples/force_field_OPLSAA/ethylene+benzene_PACKMOL
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Dtools/moltemplate/examples/force_field_OPLSAA/ethylene+benzene_PACKMOL/images/ethylene.jpg
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Dtools/moltemplate/examples/force_field_OPLSAA/ethylene+benzene_PACKMOL/moltemplate_files/ethylene.lt
Dtools/moltemplate/examples/force_field_OPLSAA/ethylene+benzene_PACKMOL/moltemplate_files/oplsaa_lt_generator
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Dtools/moltemplate/examples/force_field_OPLSAA/ethylene+benzene_PACKMOL/moltemplate_files/oplsaa_lt_generator/minimal_versions/oplsaa_subset_simplified.prm
Dtools/moltemplate/examples/force_field_OPLSAA/ethylene+benzene_PACKMOL/moltemplate_files/oplsaa_lt_generator/oplsaa_subset.prm
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Dtools/moltemplate/examples/force_field_OPLSAA/ethylene+benzene_PACKMOL/moltemplate_files/system.xyz
Dtools/moltemplate/examples/force_field_OPLSAA/ethylene+benzene_PACKMOL/packmol_files
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Dtools/moltemplate/examples/force_field_OPLSAA/ethylene+benzene_PACKMOL/packmol_files/ethylene.xyz
Dtools/moltemplate/examples/force_field_OPLSAA/ethylene+benzene_PACKMOL/packmol_files/mix_ethylene+benzene.inp
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Dtools/moltemplate/examples/force_field_OPLSAA/hexadecane
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Dtools/moltemplate/examples/force_field_OPLSAA/hexadecane/README_run.sh
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Dtools/moltemplate/examples/force_field_OPLSAA/hexadecane/README_visualize.txt
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Dtools/moltemplate/examples/force_field_OPLSAA/waterSPCE+methane
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Dtools/moltemplate/examples/force_field_OPLSUA_united_atom
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Dtools/moltemplate/examples/force_field_explicit_parameters
Dtools/moltemplate/examples/force_field_explicit_parameters/aluminum_crystal_strain
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Dtools/moltemplate/examples/force_field_explicit_parameters/ice_crystal
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Dtools/moltemplate/src/ttree_lex.py
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tools/moltemplate/examples/misc_examples/menger_sponge

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tools/moltemplate/examples/misc_examples/menger_sponge/README.TXT

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tools/moltemplate/examples/misc_examples/menger_sponge/README_setup.sh

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tools/moltemplate/examples/misc_examples/menger_sponge/README_visualize.txt

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tools/moltemplate/examples/misc_examples/menger_sponge/images

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tools/moltemplate/examples/misc_examples/menger_sponge/images/AlCell_LR.jpg

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tools/moltemplate/examples/misc_examples/menger_sponge/images/lvl1_LR.jpg

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tools/moltemplate/examples/misc_examples/menger_sponge/images/lvl3_LR.jpg

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tools/moltemplate/examples/misc_examples/menger_sponge/images/menger_sponge_lattice_8cells_t=0_zoom1_LR2.jpg

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tools/moltemplate/examples/misc_examples/menger_sponge/images/menger_sponge_lattice_8cells_t=7400_LR.jpg

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tools/moltemplate/examples/misc_examples/menger_sponge/moltemplate_files

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tools/moltemplate/examples/misc_examples/menger_sponge/moltemplate_files/al_cell.lt

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tools/moltemplate/examples/misc_examples/menger_sponge/moltemplate_files/elegant_inefficient_version

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tools/moltemplate/examples/misc_examples/menger_sponge/moltemplate_files/elegant_inefficient_version/al_cell.lt

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tools/moltemplate/examples/misc_examples/menger_sponge/moltemplate_files/elegant_inefficient_version/menger_cubes.lt

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tools/moltemplate/examples/misc_examples/menger_sponge/moltemplate_files/elegant_inefficient_version/system.lt

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tools/moltemplate/examples/misc_examples/menger_sponge/moltemplate_files/menger_cubes.lt

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tools/moltemplate/examples/misc_examples/menger_sponge/moltemplate_files/system.lt

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tools/moltemplate/examples/misc_examples/menger_sponge/run.in

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tools/moltemplate/examples/misc_examples/pyramids_vs_gravity

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tools/moltemplate/examples/misc_examples/pyramids_vs_gravity/README.TXT

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tools/moltemplate/examples/misc_examples/pyramids_vs_gravity/README_VMD_graphene.txt

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tools/moltemplate/examples/misc_examples/pyramids_vs_gravity/README_setup.sh

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tools/moltemplate/examples/misc_examples/pyramids_vs_gravity/README_visualize.txt

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tools/moltemplate/examples/misc_examples/pyramids_vs_gravity/images

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tools/moltemplate/examples/misc_examples/pyramids_vs_gravity/images/pyramids_vs_gravity_t=04800steps_LR.jpg

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tools/moltemplate/examples/misc_examples/pyramids_vs_gravity/images/pyramids_vs_gravity_t=33000steps_LR.jpg

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tools/moltemplate/examples/misc_examples/pyramids_vs_gravity/moltemplate_files

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tools/moltemplate/examples/misc_examples/pyramids_vs_gravity/moltemplate_files/README.sh

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tools/moltemplate/examples/misc_examples/pyramids_vs_gravity/moltemplate_files/graphene.lt

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tools/moltemplate/examples/misc_examples/pyramids_vs_gravity/moltemplate_files/graphene_wall.lt

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tools/moltemplate/examples/misc_examples/pyramids_vs_gravity/moltemplate_files/pyramids.lt

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tools/moltemplate/examples/misc_examples/pyramids_vs_gravity/moltemplate_files/system.lt

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tools/moltemplate/examples/misc_examples/pyramids_vs_gravity/run.in

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tools/moltemplate/moltemplate_manual.pdf

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tools/moltemplate/src

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tools/moltemplate/src/bonds_by_type.py

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tools/moltemplate/src/chargepairs_by_type.py

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tools/moltemplate/src/dump2data.py

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tools/moltemplate/src/extract_lammps_data.py

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tools/moltemplate/src/ltemplify.py

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tools/moltemplate/src/lttree.py

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tools/moltemplate/src/lttree_check.py

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tools/moltemplate/src/lttree_postprocess.py

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tools/moltemplate/src/lttree_styles.py

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tools/moltemplate/src/moltemplate.sh

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tools/moltemplate/src/moltemplate_docs_useful_scripts

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tools/moltemplate/src/moltemplate_docs_useful_scripts/docs_dump2data.txt

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tools/moltemplate/src/moltemplate_docs_useful_scripts/docs_extract_lammps_data.txt

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tools/moltemplate/src/moltemplate_docs_useful_scripts/docs_raw2data.txt

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tools/moltemplate/src/moltemplate_force_fields

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tools/moltemplate/src/moltemplate_force_fields/amber

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tools/moltemplate/src/moltemplate_force_fields/amber/README.TXT

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tools/moltemplate/src/moltemplate_force_fields/amber/amberparm2lt.sh

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tools/moltemplate/src/moltemplate_force_fields/amber/amberparm_angle_to_lt.py

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tools/moltemplate/src/moltemplate_force_fields/amber/amberparm_bond_to_lt.py

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tools/moltemplate/src/moltemplate_force_fields/amber/amberparm_dihedral_to_lt.py

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tools/moltemplate/src/moltemplate_force_fields/amber/amberparm_improper_to_lt.py

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tools/moltemplate/src/moltemplate_force_fields/amber/amberparm_mass_to_lt.py

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tools/moltemplate/src/moltemplate_force_fields/amber/amberparm_pair_to_lt.py

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tools/moltemplate/src/moltemplate_force_fields/gaff.lt

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tools/moltemplate/src/moltemplate_force_fields/graphene.lt

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tools/moltemplate/src/moltemplate_force_fields/graphite.lt

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tools/moltemplate/src/moltemplate_force_fields/images

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tools/moltemplate/src/moltemplate_force_fields/images/graphene_unit_cell.jpg

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tools/moltemplate/src/moltemplate_force_fields/images/ice_rect8_unitcell.png

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tools/moltemplate/src/moltemplate_force_fields/images/spce_ball_and_stick.jpg

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tools/moltemplate/src/moltemplate_force_fields/loplsaa.lt

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tools/moltemplate/src/moltemplate_force_fields/oplsaa

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tools/moltemplate/src/moltemplate_force_fields/oplsaa.lt

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tools/moltemplate/src/moltemplate_force_fields/oplsaa/AUTHOR.TXT

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tools/moltemplate/src/moltemplate_force_fields/oplsaa/README.TXT

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tools/moltemplate/src/moltemplate_force_fields/oplsaa/loplsaa_ext.prm

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tools/moltemplate/src/moltemplate_force_fields/spce.lt

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tools/moltemplate/src/moltemplate_force_fields/spce_ice_rect16.lt

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tools/moltemplate/src/moltemplate_force_fields/spce_ice_rect32.lt

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tools/moltemplate/src/moltemplate_force_fields/spce_ice_rect8.lt

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tools/moltemplate/src/moltemplate_force_fields/tip3p_1983.lt

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tools/moltemplate/src/moltemplate_force_fields/tip3p_1983_charmm.lt

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tools/moltemplate/src/moltemplate_force_fields/tip3p_2004.lt

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tools/moltemplate/src/moltemplate_force_fields/trappe1998.lt

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tools/moltemplate/src/moltemplate_force_fields/watmw.lt

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tools/moltemplate/src/moltemplate_scripts_depreciated

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tools/moltemplate/src/moltemplate_scripts_depreciated/oplsaa_moltemplate.py

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tools/moltemplate/src/nbody_Angles.py

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tools/moltemplate/src/nbody_Bonds.py

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tools/moltemplate/src/nbody_Dihedrals.py

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tools/moltemplate/src/nbody_Impropers.py

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tools/moltemplate/src/nbody_alternate_symmetry

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tools/moltemplate/src/nbody_alternate_symmetry/class2_dih.py

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tools/moltemplate/src/nbody_alternate_symmetry/class2_imp.py

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tools/moltemplate/src/nbody_alternate_symmetry/gaff_imp.py

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tools/moltemplate/src/nbody_alternate_symmetry/nbody_Dihedrals_nosym.py

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tools/moltemplate/src/nbody_alternate_symmetry/nbody_Impropers_Icenter_swapJK.py

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tools/moltemplate/src/nbody_alternate_symmetry/nbody_Impropers_Icenter_swapJKL.py

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tools/moltemplate/src/nbody_alternate_symmetry/nbody_Impropers_Jcenter.py

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tools/moltemplate/src/nbody_alternate_symmetry/nbody_Impropers_Jcenter_nosym.py

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tools/moltemplate/src/nbody_alternate_symmetry/opls_imp.py

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tools/moltemplate/src/nbody_by_type.py

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tools/moltemplate/src/nbody_by_type_lib.py

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tools/moltemplate/src/nbody_fix_ttree_assignments.py

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tools/moltemplate/src/nbody_graph_search.py

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tools/moltemplate/src/nbody_reorder_atoms.py

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tools/moltemplate/src/ordereddict.py

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tools/moltemplate/src/pdbsort.py

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tools/moltemplate/src/postprocess_input_script.py

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tools/moltemplate/src/raw2data.py

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tools/moltemplate/src/remove_duplicate_atoms.py

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tools/moltemplate/src/remove_duplicates_nbody.py

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tools/moltemplate/src/renumber_DATA_first_column.py

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tools/moltemplate/src/tinkerparm2lt.py

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tools/moltemplate/src/ttree.py

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tools/moltemplate/src/ttree_lex.py

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tools/moltemplate/src/ttree_matrix_stack.py

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tools/moltemplate/src/ttree_render.py

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