Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
7b8a96ee8cef
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Authored by Axel Kohlmeyer <akohlmey@gmail.com> on Jun 1 2016, 12:35.

Description

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms

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Committed

Axel Kohlmeyer <akohlmey@gmail.com>

Jun 1 2016, 12:35

Pushed

junge

Oct 6 2016, 16:49

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rLAMMPS08c8d65fea26: git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15092 f3b2605a-c512-4ea7…
rLAMMPS7f4d0cf11af4: undo LAMMPS-ICMS customizations for USER-CUDA in anticipation of its upstream…

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Axel Kohlmeyer <akohlmey@gmail.com> committed rLAMMPS7b8a96ee8cef: Merge remote-tracking branch 'lammps-ro/master' into lammps-icms (authored by Axel Kohlmeyer <akohlmey@gmail.com>).Jun 1 2016, 12:35

Merged Changes

Commit	Author	Details	Committed
08c8d65fea26	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15092 f3b2605a-c512-4ea7…	May 31 2016
91820479058f	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15091 f3b2605a-c512-4ea7…	May 31 2016
0a56b26fe10a	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15090 f3b2605a-c512-4ea7…	May 31 2016
414c1b011ff2	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15089 f3b2605a-c512-4ea7…	May 31 2016
17e44d131318	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15088 f3b2605a-c512-4ea7…	May 31 2016
194a51216854	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15087 f3b2605a-c512-4ea7…	May 31 2016
3c11e66b5a97	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15086 f3b2605a-c512-4ea7…	May 31 2016
4c107f450cc9	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15085 f3b2605a-c512-4ea7…	May 31 2016
ac14f5bc36bd	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15084 f3b2605a-c512-4ea7…	May 31 2016
876b033ea862	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15083 f3b2605a-c512-4ea7…	May 31 2016
7e7450948cc4	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15082 f3b2605a-c512-4ea7…	May 31 2016
fde2d583e54a	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15081 f3b2605a-c512-4ea7…	May 31 2016
04e401ae4ba7	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15080 f3b2605a-c512-4ea7…	May 31 2016
5b94aa3ae8e3	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15079 f3b2605a-c512-4ea7…	May 31 2016
32ba20085de8	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15078 f3b2605a-c512-4ea7…	May 31 2016
c91873924bd8	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15077 f3b2605a-c512-4ea7…	May 31 2016
cbc5b8bdae1d	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15076 f3b2605a-c512-4ea7…	May 31 2016
27725bea2f28	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15075 f3b2605a-c512-4ea7…	May 31 2016
6567493b49a6	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15074 f3b2605a-c512-4ea7…	May 31 2016
6f75d4389cb9	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15073 f3b2605a-c512-4ea7…	May 31 2016
402b7a723175	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15072 f3b2605a-c512-4ea7…	May 31 2016
9d3d6193f39a	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15071 f3b2605a-c512-4ea7…	May 31 2016
0a01592d0aa3	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15070 f3b2605a-c512-4ea7…	May 31 2016
8fa54096d38f	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15069 f3b2605a-c512-4ea7…	May 31 2016
d7c50255302f	sjplimp	git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15068 f3b2605a-c512-4ea7…	May 31 2016

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	M			doc/html/Manual.html
	M			doc/html/Section_accelerate.html
	M			doc/html/Section_commands.html
	M			doc/html/Section_example.html
	M			doc/html/Section_howto.html
	M			doc/html/Section_packages.html
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	M			doc/html/_sources/Manual.txt
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	D			doc/html/_sources/accelerate_cuda.txt
	M			doc/html/_sources/accelerate_kokkos.txt
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	M			doc/html/_sources/angle_harmonic.txt
	M			doc/html/_sources/angle_quartic.txt
	M			doc/html/_sources/angle_table.txt
	M			doc/html/_sources/atom_style.txt
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	M			doc/html/_sources/bond_harmonic.txt
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	M			doc/html/_sources/bond_morse.txt
	M			doc/html/_sources/bond_nonlinear.txt
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	M			doc/html/_sources/dihedral_table.txt
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	M			doc/html/_sources/fix_thermal_conductivity.txt
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	M			doc/html/_sources/kspace_style.txt
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	M			doc/html/_sources/pair_hbond_dreiding.txt
	M			doc/html/_sources/pair_hybrid.txt
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	M			doc/html/_sources/pair_lj96.txt
	M			doc/html/_sources/pair_lj_cubic.txt
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	M			doc/html/_sources/pair_lj_soft.txt
	M			doc/html/_sources/pair_lubricate.txt
	M			doc/html/_sources/pair_meam_spline.txt
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	M			doc/html/_sources/pair_nb3b_harmonic.txt
	M			doc/html/_sources/pair_nm.txt
	M			doc/html/_sources/pair_peri.txt
	M			doc/html/_sources/pair_resquared.txt
	M			doc/html/_sources/pair_sdk.txt
	M			doc/html/_sources/pair_soft.txt
	M			doc/html/_sources/pair_sw.txt
	M			doc/html/_sources/pair_table.txt
	M			doc/html/_sources/pair_tersoff.txt
	M			doc/html/_sources/pair_tersoff_mod.txt
	M			doc/html/_sources/pair_tersoff_zbl.txt
	M			doc/html/_sources/pair_thole.txt
	M			doc/html/_sources/pair_vashishta.txt
	M			doc/html/_sources/pair_yukawa.txt
	M			doc/html/_sources/pair_yukawa_colloid.txt
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	M			doc/html/_sources/tad.txt
	M			doc/html/_sources/variable.txt
	M			doc/html/_static/basic.css
	M			doc/html/_static/doctools.js
	D			doc/html/accelerate_cuda.html
	M			doc/html/accelerate_kokkos.html
	M			doc/html/angle_charmm.html
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	M			doc/html/angle_cosine_shift_exp.html
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	M			doc/html/atom_style.html
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	M			doc/html/bond_nonlinear.html
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	M			doc/html/compute.html
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	M			doc/html/compute_pressure.html
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	M			doc/html/dihedral_charmm.html
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	M			doc/html/dihedral_opls.html
	M			doc/html/dihedral_quadratic.html
	M			doc/html/dihedral_table.html
	M			doc/html/fix.html
	M			doc/html/fix_addforce.html
	M			doc/html/fix_ave_atom.html
	M			doc/html/fix_ave_chunk.html
	M			doc/html/fix_ave_correlate.html
	M			doc/html/fix_ave_histo.html
	D			doc/html/fix_ave_spatial.html
	D			doc/html/fix_ave_spatial_sphere.html
	M			doc/html/fix_ave_time.html
	M			doc/html/fix_aveforce.html
	M			doc/html/fix_deform.html
	M			doc/html/fix_enforce2d.html
	M			doc/html/fix_freeze.html
	M			doc/html/fix_gcmc.html
	M			doc/html/fix_gravity.html
	M			doc/html/fix_langevin.html
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	M			doc/html/fix_nve.html
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	M			doc/html/fix_nve_sphere.html
	M			doc/html/fix_nvt_asphere.html
	M			doc/html/fix_nvt_body.html
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	M			doc/html/fix_nvt_sphere.html
	M			doc/html/fix_qeq_comb.html
	M			doc/html/fix_rigid.html
	M			doc/html/fix_setforce.html
	M			doc/html/fix_shake.html
	M			doc/html/fix_temp_berendsen.html
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	M			doc/lammps.book
	M			doc/src/Manual.txt
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	M			doc/src/Section_example.txt
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	M			doc/src/bond_class2.txt
	M			doc/src/bond_fene.txt
	M			doc/src/bond_fene_expand.txt
	M			doc/src/bond_harmonic.txt
	M			doc/src/bond_harmonic_shift.txt
	M			doc/src/bond_harmonic_shift_cut.txt
	M			doc/src/bond_morse.txt
	M			doc/src/bond_nonlinear.txt
	M			doc/src/bond_quartic.txt
	M			doc/src/bond_table.txt
	M			doc/src/change_box.txt
	M			doc/src/compute.txt
	M			doc/src/compute_pe.txt
	M			doc/src/compute_pressure.txt
	M			doc/src/compute_property_atom.txt
	M			doc/src/compute_temp.txt
	M			doc/src/compute_temp_deform.txt
	M			doc/src/compute_temp_partial.txt
	M			doc/src/dihedral_charmm.txt
	M			doc/src/dihedral_class2.txt
	M			doc/src/dihedral_cosine_shift_exp.txt
	M			doc/src/dihedral_fourier.txt
	M			doc/src/dihedral_harmonic.txt
	M			doc/src/dihedral_helix.txt
	M			doc/src/dihedral_multi_harmonic.txt
	M			doc/src/dihedral_nharmonic.txt
	M			doc/src/dihedral_opls.txt
	M			doc/src/dihedral_quadratic.txt
	M			doc/src/dihedral_table.txt
	M			doc/src/fix.txt
	M			doc/src/fix_addforce.txt
	M			doc/src/fix_ave_atom.txt
	M			doc/src/fix_ave_chunk.txt
	M			doc/src/fix_ave_correlate.txt
	M			doc/src/fix_ave_histo.txt
	D			doc/src/fix_ave_spatial.txt
	D			doc/src/fix_ave_spatial_sphere.txt
	M			doc/src/fix_ave_time.txt
	M			doc/src/fix_aveforce.txt
	M			doc/src/fix_deform.txt
	M			doc/src/fix_enforce2d.txt
	M			doc/src/fix_freeze.txt
	M			doc/src/fix_gravity.txt
	M			doc/src/fix_langevin.txt
	M			doc/src/fix_nh.txt
	M			doc/src/fix_nph_asphere.txt
	M			doc/src/fix_nph_body.txt
	M			doc/src/fix_nph_sphere.txt
	M			doc/src/fix_nphug.txt
	M			doc/src/fix_npt_asphere.txt
	M			doc/src/fix_npt_body.txt
	M			doc/src/fix_npt_sphere.txt
	M			doc/src/fix_nve.txt
	M			doc/src/fix_nve_asphere.txt
	M			doc/src/fix_nve_sphere.txt
	M			doc/src/fix_nvt_asphere.txt
	M			doc/src/fix_nvt_body.txt
	M			doc/src/fix_nvt_sllod.txt
	M			doc/src/fix_nvt_sphere.txt
	M			doc/src/fix_qeq_comb.txt
	M			doc/src/fix_rigid.txt
	M			doc/src/fix_setforce.txt
	M			doc/src/fix_shake.txt
	M			doc/src/fix_temp_berendsen.txt
	M			doc/src/fix_temp_rescale.txt
	M			doc/src/fix_thermal_conductivity.txt
	M			doc/src/fix_viscosity.txt
	M			doc/src/fix_viscous.txt
	M			doc/src/fix_wall_reflect.txt
	M			doc/src/improper_class2.txt
	M			doc/src/improper_cossq.txt
	M			doc/src/improper_cvff.txt
	M			doc/src/improper_fourier.txt
	M			doc/src/improper_harmonic.txt
	M			doc/src/improper_ring.txt
	M			doc/src/improper_umbrella.txt
	M			doc/src/kspace_style.txt
	M			doc/src/package.txt
	M			doc/src/pair_adp.txt
	M			doc/src/pair_airebo.txt
	M			doc/src/pair_beck.txt
	M			doc/src/pair_born.txt
	M			doc/src/pair_brownian.txt
	M			doc/src/pair_buck.txt
	M			doc/src/pair_buck_long.txt
	M			doc/src/pair_charmm.txt
	M			doc/src/pair_class2.txt
	M			doc/src/pair_colloid.txt
	M			doc/src/pair_comb.txt
	M			doc/src/pair_coul.txt
	M			doc/src/pair_dipole.txt
	M			doc/src/pair_dpd.txt
	M			doc/src/pair_eam.txt
	M			doc/src/pair_edip.txt
	M			doc/src/pair_eim.txt
	M			doc/src/pair_gauss.txt
	M			doc/src/pair_gayberne.txt
	M			doc/src/pair_gran.txt
	M			doc/src/pair_gromacs.txt
	M			doc/src/pair_hbond_dreiding.txt
	M			doc/src/pair_hybrid.txt
	M			doc/src/pair_lj.txt
	M			doc/src/pair_lj96.txt
	M			doc/src/pair_lj_cubic.txt
	M			doc/src/pair_lj_expand.txt
	M			doc/src/pair_lj_long.txt
	M			doc/src/pair_lj_sf.txt
	M			doc/src/pair_lj_smooth.txt
	M			doc/src/pair_lj_smooth_linear.txt
	M			doc/src/pair_lj_soft.txt
	M			doc/src/pair_lubricate.txt
	M			doc/src/pair_meam_spline.txt
	M			doc/src/pair_morse.txt
	M			doc/src/pair_nb3b_harmonic.txt
	M			doc/src/pair_nm.txt
	M			doc/src/pair_peri.txt
	M			doc/src/pair_resquared.txt
	M			doc/src/pair_sdk.txt
	M			doc/src/pair_soft.txt
	M			doc/src/pair_sw.txt
	M			doc/src/pair_table.txt
	M			doc/src/pair_tersoff.txt
	M			doc/src/pair_tersoff_mod.txt
	M			doc/src/pair_tersoff_zbl.txt
	M			doc/src/pair_thole.txt
	M			doc/src/pair_vashishta.txt
	M			doc/src/pair_yukawa.txt
	M			doc/src/pair_yukawa_colloid.txt
	M			doc/src/pair_zbl.txt
	M			doc/src/prd.txt
	M			doc/src/suffix.txt
	M			doc/src/tad.txt
	M			doc/src/variable.txt
	M			examples/KAPPA/in.heat
	M			src/Depend.sh
	M			src/GPU/fix_gpu.cpp
	M			src/Makefile
	D			src/USER-CUDA
	D			src/USER-CUDA/Install.sh
	D			src/USER-CUDA/README
	D			src/USER-CUDA/atom_vec_angle_cuda.cpp
	D			src/USER-CUDA/atom_vec_angle_cuda.h
	D			src/USER-CUDA/atom_vec_atomic_cuda.cpp
	D			src/USER-CUDA/atom_vec_atomic_cuda.h
	D			src/USER-CUDA/atom_vec_charge_cuda.cpp
	D			src/USER-CUDA/atom_vec_charge_cuda.h
	D			src/USER-CUDA/atom_vec_full_cuda.cpp
	D			src/USER-CUDA/atom_vec_full_cuda.h
	D			src/USER-CUDA/comm_cuda.cpp
	D			src/USER-CUDA/comm_cuda.h
	D			src/USER-CUDA/compute_pe_cuda.cpp
	D			src/USER-CUDA/compute_pe_cuda.h
	D			src/USER-CUDA/compute_pressure_cuda.cpp
	D			src/USER-CUDA/compute_pressure_cuda.h
	D			src/USER-CUDA/compute_temp_cuda.cpp
	D			src/USER-CUDA/compute_temp_cuda.h
	D			src/USER-CUDA/compute_temp_partial_cuda.cpp
	D			src/USER-CUDA/compute_temp_partial_cuda.h
	D			src/USER-CUDA/cuda.cpp
	D			src/USER-CUDA/cuda_data.h
	D			src/USER-CUDA/cuda_modify_flags.h
	D			src/USER-CUDA/cuda_neigh_list.cpp
	D			src/USER-CUDA/cuda_neigh_list.h
	D			src/USER-CUDA/domain_cuda.cpp
	D			src/USER-CUDA/domain_cuda.h
	D			src/USER-CUDA/fft3d_cuda.cpp
	D			src/USER-CUDA/fft3d_cuda.h
	D			src/USER-CUDA/fft3d_wrap_cuda.cpp
	D			src/USER-CUDA/fft3d_wrap_cuda.h
	D			src/USER-CUDA/fix_addforce_cuda.cpp
	D			src/USER-CUDA/fix_addforce_cuda.h
	D			src/USER-CUDA/fix_aveforce_cuda.cpp
	D			src/USER-CUDA/fix_aveforce_cuda.h
	D			src/USER-CUDA/fix_enforce2d_cuda.cpp
	D			src/USER-CUDA/fix_enforce2d_cuda.h
	D			src/USER-CUDA/fix_freeze_cuda.cpp
	D			src/USER-CUDA/fix_freeze_cuda.h
	D			src/USER-CUDA/fix_gravity_cuda.cpp
	D			src/USER-CUDA/fix_gravity_cuda.h
	D			src/USER-CUDA/fix_nh_cuda.cpp
	D			src/USER-CUDA/fix_nh_cuda.h
	D			src/USER-CUDA/fix_npt_cuda.cpp
	D			src/USER-CUDA/fix_npt_cuda.h
	D			src/USER-CUDA/fix_nve_cuda.cpp
	D			src/USER-CUDA/fix_nve_cuda.h
	D			src/USER-CUDA/fix_nvt_cuda.cpp
	V			src/{USER-CUDA/fix_nvt_cuda.h → fix_ave_spatial.h}
	D			src/USER-CUDA/fix_set_force_cuda.cpp
	D			src/USER-CUDA/fix_set_force_cuda.h
	D			src/USER-CUDA/fix_shake_cuda.cpp
	D			src/USER-CUDA/fix_shake_cuda.h
	D			src/USER-CUDA/fix_temp_berendsen_cuda.cpp
	D			src/USER-CUDA/fix_temp_berendsen_cuda.h
	D			src/USER-CUDA/fix_temp_rescale_cuda.cpp
	D			src/USER-CUDA/fix_temp_rescale_cuda.h
	D			src/USER-CUDA/fix_temp_rescale_limit_cuda.cpp
	D			src/USER-CUDA/fix_temp_rescale_limit_cuda.h
	D			src/USER-CUDA/fix_viscous_cuda.cpp
	D			src/USER-CUDA/fix_viscous_cuda.h
	D			src/USER-CUDA/modify_cuda.cpp
	D			src/USER-CUDA/modify_cuda.h
	D			src/USER-CUDA/neigh_full_cuda.cpp
	D			src/USER-CUDA/neighbor_cuda.cpp
	D			src/USER-CUDA/neighbor_cuda.h
	D			src/USER-CUDA/pair_born_coul_long_cuda.cpp
	D			src/USER-CUDA/pair_born_coul_long_cuda.h
	D			src/USER-CUDA/pair_buck_coul_cut_cuda.cpp
	D			src/USER-CUDA/pair_buck_coul_cut_cuda.h
	D			src/USER-CUDA/pair_buck_coul_long_cuda.cpp
	D			src/USER-CUDA/pair_buck_coul_long_cuda.h
	D			src/USER-CUDA/pair_buck_cuda.cpp
	D			src/USER-CUDA/pair_buck_cuda.h
	D			src/USER-CUDA/pair_eam_alloy_cuda.cpp
	D			src/USER-CUDA/pair_eam_alloy_cuda.h
	D			src/USER-CUDA/pair_eam_cuda.cpp
	D			src/USER-CUDA/pair_eam_cuda.h
	D			src/USER-CUDA/pair_eam_fs_cuda.cpp
	D			src/USER-CUDA/pair_eam_fs_cuda.h
	D			src/USER-CUDA/pair_gran_hooke_cuda.cpp
	D			src/USER-CUDA/pair_gran_hooke_cuda.h
	D			src/USER-CUDA/pair_lj96_cut_cuda.cpp
	D			src/USER-CUDA/pair_lj96_cut_cuda.h
	D			src/USER-CUDA/pair_lj_charmm_coul_charmm_cuda.cpp
	D			src/USER-CUDA/pair_lj_charmm_coul_charmm_cuda.h
	D			src/USER-CUDA/pair_lj_charmm_coul_charmm_implicit_cuda.cpp
	D			src/USER-CUDA/pair_lj_charmm_coul_charmm_implicit_cuda.h
	D			src/USER-CUDA/pair_lj_charmm_coul_long_cuda.cpp
	D			src/USER-CUDA/pair_lj_charmm_coul_long_cuda.h
	D			src/USER-CUDA/pair_lj_class2_coul_cut_cuda.cpp
	D			src/USER-CUDA/pair_lj_class2_coul_cut_cuda.h
	D			src/USER-CUDA/pair_lj_class2_coul_long_cuda.cpp
	D			src/USER-CUDA/pair_lj_class2_coul_long_cuda.h
	D			src/USER-CUDA/pair_lj_class2_cuda.cpp
	D			src/USER-CUDA/pair_lj_class2_cuda.h
	D			src/USER-CUDA/pair_lj_cut_coul_cut_cuda.cpp
	D			src/USER-CUDA/pair_lj_cut_coul_cut_cuda.h
	D			src/USER-CUDA/pair_lj_cut_coul_debye_cuda.cpp
	D			src/USER-CUDA/pair_lj_cut_coul_debye_cuda.h
	D			src/USER-CUDA/pair_lj_cut_coul_long_cuda.cpp
	D			src/USER-CUDA/pair_lj_cut_coul_long_cuda.h
	D			src/USER-CUDA/pair_lj_cut_cuda.cpp
	D			src/USER-CUDA/pair_lj_cut_cuda.h
	D			src/USER-CUDA/pair_lj_cut_experimental_cuda.cpp
	D			src/USER-CUDA/pair_lj_cut_experimental_cuda.h
	D			src/USER-CUDA/pair_lj_expand_cuda.cpp
	D			src/USER-CUDA/pair_lj_expand_cuda.h
	D			src/USER-CUDA/pair_lj_gromacs_coul_gromacs_cuda.cpp
	D			src/USER-CUDA/pair_lj_gromacs_coul_gromacs_cuda.h
	D			src/USER-CUDA/pair_lj_gromacs_cuda.cpp
	D			src/USER-CUDA/pair_lj_gromacs_cuda.h
	D			src/USER-CUDA/pair_lj_sdk_coul_long_cuda.cpp
	D			src/USER-CUDA/pair_lj_sdk_coul_long_cuda.h
	D			src/USER-CUDA/pair_lj_sdk_cuda.cpp
	D			src/USER-CUDA/pair_lj_sdk_cuda.h
	D			src/USER-CUDA/pair_lj_smooth_cuda.cpp
	D			src/USER-CUDA/pair_lj_smooth_cuda.h
	D			src/USER-CUDA/pair_morse_cuda.cpp
	D			src/USER-CUDA/pair_morse_cuda.h
	D			src/USER-CUDA/pair_sw_cuda.cpp
	D			src/USER-CUDA/pair_sw_cuda.h
	D			src/USER-CUDA/pair_tersoff_cuda.cpp
	D			src/USER-CUDA/pair_tersoff_cuda.h
	D			src/USER-CUDA/pair_tersoff_zbl_cuda.cpp
	D			src/USER-CUDA/pair_tersoff_zbl_cuda.h
	D			src/USER-CUDA/pppm_cuda.cpp
	D			src/USER-CUDA/pppm_cuda.h
	D			src/USER-CUDA/pppm_old.cpp
	D			src/USER-CUDA/pppm_old.h
	D			src/USER-CUDA/user_cuda.h
	D			src/USER-CUDA/verlet_cuda.cpp
	D			src/USER-CUDA/verlet_cuda.h
	M			src/USER-FEP/Install.sh
	M			src/USER-FEP/README
	M			src/USER-MISC/README
	D			src/USER-MISC/fix_ave_spatial_sphere.cpp
	D			src/USER-MISC/fix_ave_spatial_sphere.h
	M			src/USER-OMP/fix_omp.cpp
	D			src/accelerator_cuda.h
	M			src/atom.cpp
	M			src/atom_vec.cpp
	M			src/atom_vec.h
	M			src/comm_tiled.cpp
	M			src/fix_ave_spatial.cpp
	V			src/{fix_ave_spatial.h ← USER-CUDA/fix_nvt_cuda.h}
	M			src/fix_momentum.cpp
	M			src/info.cpp
	M			src/input.cpp
	M			src/lammps.cpp
	M			src/lammps.h
	M			src/output.cpp
	M			src/pair.cpp
	M			src/pair_table.cpp
	M			src/update.cpp
	M			src/version.h
	M			tools/msi2lmp/frc_files/clayff.frc