Diffusion lammps d80a6cbd317a

Merge pull request #621 from lammps/user-meso
d80a6cbd317a
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Authored by Steve Plimpton <sjplimp@sandia.gov> on Aug 23 2017, 22:12.

Description

Merge pull request #621 from lammps/user-meso

new USER-MESO package

Details

Committed

GitHub <noreply@github.com>

Aug 23 2017, 22:12

Pushed

junge

Oct 19 2017, 09:53

Parents

rLAMMPScdfb1aa04375: make links unique, fix doc format warnings and add entries to administrative…
rLAMMPSc4b37039ab88: Merge pull request #619 from jrgissing/molecule_maxspecial

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Event Timeline

GitHub <noreply@github.com> committed rLAMMPSd80a6cbd317a: Merge pull request #621 from lammps/user-meso (authored by Steve Plimpton <sjplimp@sandia.gov>).Aug 23 2017, 22:12

Merged Changes

Commit	Author	Details	Committed
cdfb1aa04375	Axel Kohlmeyer	make links unique, fix doc format warnings and add entries to administrative…	Aug 23 2017
b80752a40c56	Axel Kohlmeyer	restore changes to read_data docs, that would have been lost due to merging an…	Aug 23 2017
79d5ca669dcb	Axel Kohlmeyer	fix issues indicated by compiler warnings	Aug 23 2017
26c15140be20	Axel Kohlmeyer	add USER-MESO files to .gitignore	Aug 23 2017
f945d4567d4f	Steve Plimpton	new USER-MESO package	Aug 19 2017

Changes (93)

		Path
A		doc/src/Eqs/fix_mvv_dpd.jpg
A		doc/src/Eqs/fix_mvv_dpd.tex
A		doc/src/Eqs/pair_edpd_force.jpg
A		doc/src/Eqs/pair_edpd_force.tex
A		doc/src/Eqs/pair_edpd_gov.jpg
A		doc/src/Eqs/pair_edpd_gov.tex
A		doc/src/Eqs/pair_edpd_heat.jpg
A		doc/src/Eqs/pair_edpd_heat.tex
A		doc/src/Eqs/pair_edpd_kappa.jpg
A		doc/src/Eqs/pair_edpd_kappa.tex
A		doc/src/Eqs/pair_mdpd_force.jpg
A		doc/src/Eqs/pair_mdpd_force.tex
A		doc/src/Eqs/pair_tdpd_flux.jpg
A		doc/src/Eqs/pair_tdpd_flux.tex
A		doc/src/Eqs/pair_tdpd_force.jpg
A		doc/src/Eqs/pair_tdpd_force.tex
A		doc/src/Eqs/pair_tdpd_gov.jpg
A		doc/src/Eqs/pair_tdpd_gov.tex
A		doc/src/JPG/examples_edpd.jpg
A		doc/src/JPG/examples_mdpd.gif
A		doc/src/JPG/examples_mdpd_first.jpg
A		doc/src/JPG/examples_mdpd_last.jpg
A		doc/src/JPG/examples_tdpd.jpg
M		doc/src/Section_commands.txt
M		doc/src/Section_packages.txt
M		doc/src/atom_style.txt
A		doc/src/compute_edpd_temp_atom.txt
A		doc/src/compute_tdpd_cc_atom.txt
M		doc/src/computes.txt
A		doc/src/fix_dpd_source.txt
A		doc/src/fix_mvv_dpd.txt
M		doc/src/fixes.txt
M		doc/src/lammps.book
M		doc/src/pair_dpd.txt
A		doc/src/pair_meso.txt
M		doc/src/pair_snap.txt
M		doc/src/pairs.txt
M		doc/src/read_data.txt
M		doc/src/set.txt
A	(dir)	examples/USER/meso/
A		examples/USER/meso/README
A	(dir)	examples/USER/meso/edpd/
A		examples/USER/meso/edpd/in.edpd
A		examples/USER/meso/edpd/log.16Aug17.edpd.g++.1
A		examples/USER/meso/edpd/log.16Aug17.edpd.g++.4
A		examples/USER/meso/edpd/temp.profile.16Aug17.edpd.g++.1
A		examples/USER/meso/edpd/temp.profile.16Aug17.edpd.g++.4
A	(dir)	examples/USER/meso/mdpd/
A		examples/USER/meso/mdpd/in.mdpd
A		examples/USER/meso/mdpd/log.16Aug17.mdpd.g++.1
A		examples/USER/meso/mdpd/log.16Aug17.mdpd.g++.4
A	(dir)	examples/USER/meso/tdpd/
A		examples/USER/meso/tdpd/cc.profile.16Aug17.tdpd.g++.1
A		examples/USER/meso/tdpd/cc.profile.16Aug17.tdpd.g++.4
A		examples/USER/meso/tdpd/in.tdpd
A		examples/USER/meso/tdpd/log.16Aug17.tdpd.g++.1
A		examples/USER/meso/tdpd/log.16Aug17.tdpd.g++.4
M		src/.gitignore
M		src/Makefile
A	(dir)	src/USER-MESO/
A		src/USER-MESO/README
A		src/USER-MESO/atom_vec_edpd.cpp
A		src/USER-MESO/atom_vec_edpd.h
A		src/USER-MESO/atom_vec_mdpd.cpp
A		src/USER-MESO/atom_vec_mdpd.h
A		src/USER-MESO/atom_vec_tdpd.cpp
A		src/USER-MESO/atom_vec_tdpd.h
A		src/USER-MESO/compute_edpd_temp_atom.cpp
A		src/USER-MESO/compute_edpd_temp_atom.h
A		src/USER-MESO/compute_tdpd_cc_atom.cpp
A		src/USER-MESO/compute_tdpd_cc_atom.h
A		src/USER-MESO/fix_edpd_source.cpp
A		src/USER-MESO/fix_edpd_source.h
A		src/USER-MESO/fix_mvv_dpd.cpp
A		src/USER-MESO/fix_mvv_dpd.h
A		src/USER-MESO/fix_mvv_edpd.cpp
A		src/USER-MESO/fix_mvv_edpd.h
A		src/USER-MESO/fix_mvv_tdpd.cpp
A		src/USER-MESO/fix_mvv_tdpd.h
A		src/USER-MESO/fix_tdpd_source.cpp
A		src/USER-MESO/fix_tdpd_source.h
A		src/USER-MESO/pair_edpd.cpp
A		src/USER-MESO/pair_edpd.h
A		src/USER-MESO/pair_mdpd.cpp
A		src/USER-MESO/pair_mdpd.h
A		src/USER-MESO/pair_mdpd_rhosum.cpp
A		src/USER-MESO/pair_mdpd_rhosum.h
A		src/USER-MESO/pair_tdpd.cpp
A		src/USER-MESO/pair_tdpd.h
M		src/atom.cpp
M		src/atom.h
M		src/set.cpp
M		src/set.h