Merge branch 'small' into integration
dd34feb2bdc6
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Authored by Steve Plimpton <sjplimp@sandia.gov> on Sep 8 2016, 22:35.

Description

Merge branch 'small' into integration

Details

Committed

Steve Plimpton <sjplimp@sandia.gov>

Sep 8 2016, 22:35

Pushed

junge

Oct 19 2017, 09:53

Parents

rLAMMPS2524c5b52654: Merge branch 'small-bugfixes' of https://github.com/akohlmey/lammps into small
rLAMMPSb866e0663b9f: Merge pull request #24 from rbberger/info_command_styles

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Event Timeline

Steve Plimpton <sjplimp@sandia.gov> committed rLAMMPSdd34feb2bdc6: Merge branch 'small' into integration (authored by Steve Plimpton <sjplimp@sandia.gov>).Sep 8 2016, 22:35

Merged Changes

Commit	Author	Details	Committed
2524c5b52654	Steve Plimpton	Merge branch 'small-bugfixes' of https://github.com/akohlmey/lammps into small	Sep 8 2016
a6df1e53b43f	Axel Kohlmeyer	ignore all variants of the vashishta pair styles in src/	Sep 8 2016
9b2d5ff3e72d	Axel Kohlmeyer	remove executable permissions on non-executables and non-scripts	Sep 8 2016
c33e1049d8dd	Axel Kohlmeyer	delete duplicate fclose() in fix ttm/mod constructor	Sep 8 2016
f56c41eec047	Axel Kohlmeyer	update with correct error description. sync with manual.	Sep 7 2016
91381525638c	Axel Kohlmeyer	Merge branch 'integration' into small-bugfixes	Sep 7 2016
4314299be910	Axel Kohlmeyer	harden fix shear/history against use-after-delete and from incorrect use of…	Sep 6 2016

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				Path
	M			src/.gitignore
	M			src/ASPHERE/compute_temp_asphere.cpp
	M			src/ASPHERE/compute_temp_asphere.h
	M			src/ASPHERE/fix_npt_asphere.cpp
	M			src/ASPHERE/fix_npt_asphere.h
	M			src/ASPHERE/fix_nve_asphere.cpp
	M			src/ASPHERE/fix_nve_asphere.h
	M			src/ASPHERE/fix_nve_asphere_noforce.h
	M			src/ASPHERE/fix_nvt_asphere.cpp
	M			src/ASPHERE/fix_nvt_asphere.h
	M			src/ASPHERE/pair_gayberne.cpp
	M			src/ASPHERE/pair_gayberne.h
	M			src/ASPHERE/pair_resquared.cpp
	M			src/ASPHERE/pair_resquared.h
	M			src/BODY/compute_temp_body.cpp
	M			src/BODY/compute_temp_body.h
	M			src/BODY/fix_npt_body.cpp
	M			src/BODY/fix_npt_body.h
	M			src/BODY/fix_nvt_body.cpp
	M			src/BODY/fix_nvt_body.h
	M			src/COLLOID/pair_brownian.cpp
	M			src/COLLOID/pair_lubricate.cpp
	M			src/DIPOLE/pair_lj_cut_dipole_cut.cpp
	M			src/DIPOLE/pair_lj_cut_dipole_cut.h
	M			src/DIPOLE/pair_lj_cut_dipole_long.cpp
	M			src/DIPOLE/pair_lj_cut_dipole_long.h
	M			src/DIPOLE/pair_lj_long_dipole_long.cpp
	M			src/DIPOLE/pair_lj_long_dipole_long.h
	M			src/GPU/pair_lj_cut_dipole_cut_gpu.cpp
	M			src/GPU/pair_lj_cut_dipole_cut_gpu.h
	M			src/GPU/pair_lj_sf_dipole_sf_gpu.cpp
	M			src/GPU/pair_lj_sf_dipole_sf_gpu.h
	M			src/KOKKOS/angle_charmm_kokkos.cpp
	M			src/KOKKOS/angle_charmm_kokkos.h
	M			src/KOKKOS/angle_harmonic_kokkos.cpp
	M			src/KOKKOS/angle_harmonic_kokkos.h
	M			src/KOKKOS/bond_fene_kokkos.cpp
	M			src/KOKKOS/bond_fene_kokkos.h
	M			src/KOKKOS/bond_harmonic_kokkos.cpp
	M			src/KOKKOS/bond_harmonic_kokkos.h
	M			src/KOKKOS/compute_temp_kokkos.cpp
	M			src/KOKKOS/compute_temp_kokkos.h
	M			src/KOKKOS/dihedral_charmm_kokkos.cpp
	M			src/KOKKOS/dihedral_charmm_kokkos.h
	M			src/KOKKOS/dihedral_opls_kokkos.cpp
	M			src/KOKKOS/dihedral_opls_kokkos.h
	M			src/KOKKOS/fix_deform_kokkos.cpp
	M			src/KOKKOS/fix_deform_kokkos.h
	M			src/KOKKOS/fix_nh_kokkos.cpp
	M			src/KOKKOS/fix_nh_kokkos.h
	M			src/KOKKOS/fix_nph_kokkos.cpp
	M			src/KOKKOS/fix_nph_kokkos.h
	M			src/KOKKOS/fix_npt_kokkos.cpp
	M			src/KOKKOS/fix_npt_kokkos.h
	M			src/KOKKOS/fix_nvt_kokkos.cpp
	M			src/KOKKOS/fix_nvt_kokkos.h
	M			src/KOKKOS/fix_setforce_kokkos.cpp
	M			src/KOKKOS/fix_setforce_kokkos.h
	M			src/KOKKOS/fix_wall_reflect_kokkos.cpp
	M			src/KOKKOS/fix_wall_reflect_kokkos.h
	M			src/KOKKOS/improper_harmonic_kokkos.cpp
	M			src/KOKKOS/improper_harmonic_kokkos.h
	M			src/KOKKOS/neigh_bond_kokkos.cpp
	M			src/KOKKOS/neigh_bond_kokkos.h
	M			src/KOKKOS/pair_buck_kokkos.cpp
	M			src/KOKKOS/pair_buck_kokkos.h
	M			src/KOKKOS/pair_coul_dsf_kokkos.cpp
	M			src/KOKKOS/pair_coul_dsf_kokkos.h
	M			src/KOKKOS/pair_coul_wolf_kokkos.cpp
	M			src/KOKKOS/pair_coul_wolf_kokkos.h
	M			src/KOKKOS/pair_eam_alloy_kokkos.cpp
	M			src/KOKKOS/pair_eam_alloy_kokkos.h
	M			src/KOKKOS/pair_eam_fs_kokkos.cpp
	M			src/KOKKOS/pair_eam_fs_kokkos.h
	M			src/KOKKOS/pair_eam_kokkos.cpp
	M			src/KOKKOS/pair_eam_kokkos.h
	M			src/KOKKOS/pair_sw_kokkos.cpp
	M			src/KOKKOS/pair_sw_kokkos.h
	M			src/KOKKOS/pair_tersoff_kokkos.cpp
	M			src/KOKKOS/pair_tersoff_kokkos.h
	M			src/KOKKOS/pair_tersoff_mod_kokkos.cpp
	M			src/KOKKOS/pair_tersoff_mod_kokkos.h
	M			src/KOKKOS/pair_tersoff_zbl_kokkos.cpp
	M			src/KOKKOS/pair_tersoff_zbl_kokkos.h
	M			src/KOKKOS/region_block_kokkos.cpp
	M			src/KOKKOS/region_block_kokkos.h
	M			src/KSPACE/pair_lj_long_tip4p_long.cpp
	M			src/KSPACE/pair_lj_long_tip4p_long.h
	M			src/KSPACE/pppm_disp.cpp
	M			src/KSPACE/pppm_disp.h
	M			src/KSPACE/pppm_disp_tip4p.cpp
	M			src/KSPACE/pppm_disp_tip4p.h
	M			src/KSPACE/pppm_stagger.cpp
	M			src/KSPACE/pppm_stagger.h
	M			src/MAKE/OPTIONS/Makefile.intel_cpu_intelmpi
	M			src/MAKE/OPTIONS/Makefile.intel_cpu_mpich
	M			src/MAKE/OPTIONS/Makefile.intel_cpu_openmpi
	M			src/MAKE/OPTIONS/Makefile.knl
	M			src/MANYBODY/pair_polymorphic.cpp
	M			src/MANYBODY/pair_polymorphic.h
	M			src/MANYBODY/pair_sw.cpp
	M			src/MANYBODY/pair_sw.h
	M			src/MANYBODY/pair_tersoff.cpp
	M			src/MANYBODY/pair_tersoff.h
	M			src/MANYBODY/pair_tersoff_zbl.h
	M			src/MANYBODY/pair_vashishta.cpp
	M			src/MANYBODY/pair_vashishta.h
	M			src/MC/fix_bond_break.cpp
	M			src/MC/fix_bond_break.h
	M			src/MC/fix_bond_create.cpp
	M			src/MC/fix_bond_create.h
	M			src/MC/fix_tfmc.cpp
	M			src/MC/fix_tfmc.h
	M			src/MOLECULE/bond_quartic.cpp
	M			src/Makefile
	M			src/PERI/atom_vec_peri.h
	M			src/SHOCK/fix_append_atoms.h
	M			src/USER-INTEL/bond_fene_intel.cpp
	M			src/USER-INTEL/bond_fene_intel.h
	M			src/USER-INTEL/fix_nve_asphere_intel.cpp
	M			src/USER-INTEL/fix_nve_asphere_intel.h
	M			src/USER-INTEL/pair_sw_intel.cpp
	M			src/USER-INTEL/pair_sw_intel.h
	M			src/USER-LB/README
	M			src/USER-LB/fix_lb_fluid.cpp
	M			src/USER-LB/fix_lb_fluid.h
	M			src/USER-LB/fix_lb_momentum.cpp
	M			src/USER-LB/fix_lb_momentum.h
	M			src/USER-LB/fix_lb_pc.cpp
	M			src/USER-LB/fix_lb_pc.h
	M			src/USER-LB/fix_lb_rigid_pc_sphere.cpp
	M			src/USER-LB/fix_lb_rigid_pc_sphere.h
	M			src/USER-LB/fix_lb_viscous.cpp
	M			src/USER-LB/fix_lb_viscous.h
	M			src/USER-MISC/fix_ti_rs.cpp
	M			src/USER-MISC/fix_ti_rs.h
	M			src/USER-MISC/fix_ti_spring.cpp
	M			src/USER-MISC/fix_ti_spring.h
	M			src/USER-MISC/fix_ttm_mod.cpp
	M			src/USER-MISC/pair_edip.cpp
	M			src/USER-MISC/pair_edip.h
	M			src/USER-MISC/pair_lj_sf_dipole_sf.cpp
	M			src/USER-MISC/pair_lj_sf_dipole_sf.h
	M			src/USER-OMP/msm_omp.cpp
	M			src/USER-OMP/msm_omp.h
	M			src/USER-OMP/pair_born_coul_msm_omp.cpp
	M			src/USER-OMP/pair_born_coul_msm_omp.h
	M			src/USER-OMP/pair_buck_coul_msm_omp.cpp
	M			src/USER-OMP/pair_buck_coul_msm_omp.h
	M			src/USER-OMP/pair_coul_msm_omp.cpp
	M			src/USER-OMP/pair_coul_msm_omp.h
	M			src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp
	M			src/USER-OMP/pair_lj_charmm_coul_msm_omp.h
	M			src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp
	M			src/USER-OMP/pair_lj_cut_coul_msm_omp.h
	M			src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp
	M			src/USER-OMP/pair_lj_cut_dipole_cut_omp.h
	M			src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp
	M			src/USER-OMP/pair_lj_sf_dipole_sf_omp.h
	M			src/atom_vec_ellipsoid.cpp
	M			src/atom_vec_ellipsoid.h
	M			src/compute_pe_atom.cpp
	M			src/compute_pe_atom.h
	M			src/compute_vacf.cpp
	M			src/compute_vacf.h
	M			src/dump_cfg.cpp
	M			src/dump_cfg.h
	M			src/fix_controller.h
	M			src/fix_shear_history.cpp
	M			src/math_extra.h