Diffusion lammps fe583386ec82

import gpu library snapshot from mike brown
fe583386ec82
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Authored by Axel Kohlmeyer <akohlmey@gmail.com> on Nov 5 2011, 00:17.

Description

import gpu library snapshot from mike brown

Details

Committed

Axel Kohlmeyer <akohlmey@gmail.com>

Nov 5 2011, 00:17

Pushed

junge

Oct 6 2016, 16:49

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rLAMMPS2e98904bbabc: update makefile for coul/long/gpu

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Axel Kohlmeyer <akohlmey@gmail.com> committed rLAMMPSfe583386ec82: import gpu library snapshot from mike brown (authored by Axel Kohlmeyer <akohlmey@gmail.com>).Nov 5 2011, 00:17

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				Path
	M			lib/gpu/Makefile.fermi
	M			lib/gpu/Makefile.firefly
	M			lib/gpu/Makefile.firefly_opencl
	M			lib/gpu/Makefile.lens
	M			lib/gpu/Makefile.lincoln
	M			lib/gpu/Makefile.linux
	M			lib/gpu/Makefile.linux_opencl
	M			lib/gpu/Makefile.longhorn
	M			lib/gpu/Makefile.mac
	M			lib/gpu/Makefile.mac_opencl
	M			lib/gpu/Nvidia.makefile
	M			lib/gpu/Opencl.makefile
	M			lib/gpu/README
	V			lib/gpu/{atomic_gpu_memory.cpp → lal_base_atomic.cpp}
	V			lib/gpu/{atomic_gpu_memory.h → lal_base_atomic.h}
	V			lib/gpu/{base_ellipsoid.cpp → lal_base_ellipsoid.cpp}
	V			lib/gpu/{base_ellipsoid.h → lal_base_ellipsoid.h}
	V			lib/gpu/{charge_gpu_memory.cpp → lal_base_charge.cpp}
	V			lib/gpu/{charge_gpu_memory.h → lal_base_charge.h}
	V			lib/gpu/{cmm_cut_gpu.cpp → lal_cg_cmm_ext.cpp}
	D			lib/gpu/cmm_cut_gpu_kernel.cu
	V			lib/gpu/{cmm_cut_gpu_memory.cpp → lal_cg_cmm.cpp}
	V			lib/gpu/{cmm_cut_gpu_memory.h → lal_cg_cmm.h}
	V			lib/gpu/{cmmc_long_gpu.cpp → lal_cg_cmm_long_ext.cpp}
	D			lib/gpu/cmmc_long_gpu_kernel.cu
	V			lib/gpu/{cmmc_long_gpu_memory.cpp → lal_cg_cmm_long.cpp}
	V			lib/gpu/{cmmc_long_gpu_memory.h → lal_cg_cmm_long.h}
	V			lib/gpu/{cmmc_msm_gpu.cpp → lal_cg_cmm_msm_ext.cpp}
	V			lib/gpu/{cmmc_msm_gpu_kernel.cu → lal_cg_cmm_msm.cu}
	V			lib/gpu/{cmmc_msm_gpu_memory.cpp → lal_cg_cmm_msm.cpp}
	V			lib/gpu/{cmmc_msm_gpu_memory.h → lal_cg_cmm_msm.h}
	V			lib/gpu/{coul_long_gpu.cpp → lal_coul_long_ext.cpp}
	D			lib/gpu/coul_long_gpu_kernel.cu
	V			lib/gpu/{coul_long_gpu_memory.cpp → lal_coul_long.cpp}
	V			lib/gpu/{coul_long_gpu_memory.h → lal_coul_long.h}
	V			lib/gpu/{crml_gpu.cpp → lal_charmm_long_ext.cpp}
	V			lib/gpu/{crml_gpu_kernel.cu → lal_charmm_long.cu}
	V			lib/gpu/{crml_gpu_memory.cpp → lal_charmm_long.cpp}
	V			lib/gpu/{crml_gpu_memory.h → lal_charmm_long.h}
	D			lib/gpu/ellipsoid_extra.h
	V			lib/gpu/{ellipsoid_nbor.cu → lal_ellipsoid_nbor.cu}
	V			lib/gpu/{gayberne.cpp → lal_gayberne.cpp}
	V			lib/gpu/{gayberne.cu → lal_gayberne.cu}
	V			lib/gpu/{gayberne.h → lal_gayberne.h}
	V			lib/gpu/{gayberne_ext.cpp → lal_gayberne_ext.cpp}
	V			lib/gpu/{gayberne_lj.cu → lal_gayberne_lj.cu}
	D			lib/gpu/gb_gpu.cpp
	D			lib/gpu/gb_gpu_extra.h
	D			lib/gpu/gb_gpu_kernel.cu
	D			lib/gpu/gb_gpu_kernel_lj.cu
	D			lib/gpu/gb_gpu_kernel_nbor.cu
	D			lib/gpu/gb_gpu_memory.cpp
	D			lib/gpu/gb_gpu_memory.h
	M			lib/gpu/geryon/file_to_cstr.sh
	M			lib/gpu/geryon/nvc_device.h
	M			lib/gpu/geryon/nvd_device.h
	M			lib/gpu/geryon/ocl_device.h
	M			lib/gpu/geryon/ocl_kernel.h
	M			lib/gpu/geryon/ucl_nv_kernel.h
	V			lib/gpu/{lal_answer.cpp ← pair_gpu_ans.cpp}
	V			lib/gpu/{lal_answer.h ← pair_gpu_ans.h}
	V			lib/gpu/{lal_atom.cpp ← pair_gpu_atom.cpp}
	A			lib/gpu/lal_atom.cu
	V			lib/gpu/{lal_atom.h ← pair_gpu_atom.h}
	A			lib/gpu/lal_aux_fun1.h
	V			lib/gpu/{lal_balance.h ← pair_gpu_balance.h}
	V			lib/gpu/{lal_base_atomic.cpp ← atomic_gpu_memory.cpp}
	V			lib/gpu/{lal_base_atomic.h ← atomic_gpu_memory.h}
	V			lib/gpu/{lal_base_charge.cpp ← charge_gpu_memory.cpp}
	V			lib/gpu/{lal_base_charge.h ← charge_gpu_memory.h}
	V			lib/gpu/{lal_base_ellipsoid.cpp ← base_ellipsoid.cpp}
	V			lib/gpu/{lal_base_ellipsoid.h ← base_ellipsoid.h}
	V			lib/gpu/{lal_cg_cmm.cpp ← cmm_cut_gpu_memory.cpp}
	A			lib/gpu/lal_cg_cmm.cu
	V			lib/gpu/{lal_cg_cmm.h ← cmm_cut_gpu_memory.h}
	V			lib/gpu/{lal_cg_cmm_ext.cpp ← cmm_cut_gpu.cpp}
	V			lib/gpu/{lal_cg_cmm_long.cpp ← cmmc_long_gpu_memory.cpp}
	A			lib/gpu/lal_cg_cmm_long.cu
	V			lib/gpu/{lal_cg_cmm_long.h ← cmmc_long_gpu_memory.h}
	V			lib/gpu/{lal_cg_cmm_long_ext.cpp ← cmmc_long_gpu.cpp}
	V			lib/gpu/{lal_cg_cmm_msm.cpp ← cmmc_msm_gpu_memory.cpp}
	V			lib/gpu/{lal_cg_cmm_msm.cu ← cmmc_msm_gpu_kernel.cu}
	V			lib/gpu/{lal_cg_cmm_msm.h ← cmmc_msm_gpu_memory.h}
	V			lib/gpu/{lal_cg_cmm_msm_ext.cpp ← cmmc_msm_gpu.cpp}
	V			lib/gpu/{lal_charmm_long.cpp ← crml_gpu_memory.cpp}
	V			lib/gpu/{lal_charmm_long.cu ← crml_gpu_kernel.cu}
	V			lib/gpu/{lal_charmm_long.h ← crml_gpu_memory.h}
	V			lib/gpu/{lal_charmm_long_ext.cpp ← crml_gpu.cpp}
	V			lib/gpu/{lal_coul_long.cpp ← coul_long_gpu_memory.cpp}
	A			lib/gpu/lal_coul_long.cu
	V			lib/gpu/{lal_coul_long.h ← coul_long_gpu_memory.h}
	V			lib/gpu/{lal_coul_long_ext.cpp ← coul_long_gpu.cpp}
	V			lib/gpu/{lal_device.cpp ← pair_gpu_device.cpp}
	A			lib/gpu/lal_device.cu
	V			lib/gpu/{lal_device.h ← pair_gpu_device.h}
	A			lib/gpu/lal_ellipsoid_extra.h
	V			lib/gpu/{lal_ellipsoid_nbor.cu ← ellipsoid_nbor.cu}
	V			lib/gpu/{lal_gayberne.cpp ← gayberne.cpp}
	V			lib/gpu/{lal_gayberne.cu ← gayberne.cu}
	V			lib/gpu/{lal_gayberne.h ← gayberne.h}
	V			lib/gpu/{lal_gayberne_ext.cpp ← gayberne_ext.cpp}
	V			lib/gpu/{lal_gayberne_lj.cu ← gayberne_lj.cu}
	V			lib/gpu/{lal_lj.cpp ← lj_cut_gpu_memory.cpp}
	A			lib/gpu/lal_lj.cu
	V			lib/gpu/{lal_lj.h ← lj_cut_gpu_memory.h}
	V			lib/gpu/{lal_lj96.cpp ← lj96_cut_gpu_memory.cpp}
	A			lib/gpu/lal_lj96.cu
	V			lib/gpu/{lal_lj96.h ← lj96_cut_gpu_memory.h}
	V			lib/gpu/{lal_lj96_ext.cpp ← lj96_cut_gpu.cpp}
	V			lib/gpu/{lal_lj_class2_long.cpp ← lj_class2_long.cpp}
	V			lib/gpu/{lal_lj_class2_long.cu ← lj_class2_long.cu}
	V			lib/gpu/{lal_lj_class2_long.h ← lj_class2_long.h}
	V			lib/gpu/{lal_lj_class2_long_ext.cpp ← lj_class2_long_ext.cpp}
	V			lib/gpu/{lal_lj_coul.cpp ← ljc_cut_gpu_memory.cpp}
	A			lib/gpu/lal_lj_coul.cu
	V			lib/gpu/{lal_lj_coul.h ← ljc_cut_gpu_memory.h}
	V			lib/gpu/{lal_lj_coul_ext.cpp ← ljc_cut_gpu.cpp}
	V			lib/gpu/{lal_lj_coul_long.cpp ← ljcl_cut_gpu_memory.cpp}
	A			lib/gpu/lal_lj_coul_long.cu
	V			lib/gpu/{lal_lj_coul_long.h ← ljcl_cut_gpu_memory.h}
	V			lib/gpu/{lal_lj_coul_long_ext.cpp ← ljcl_cut_gpu.cpp}
	V			lib/gpu/{lal_lj_expand.cpp ← lj_expand_gpu_memory.cpp}
	A			lib/gpu/lal_lj_expand.cu
	V			lib/gpu/{lal_lj_expand.h ← lj_expand_gpu_memory.h}
	V			lib/gpu/{lal_lj_expand_ext.cpp ← lj_expand_gpu.cpp}
	V			lib/gpu/{lal_lj_ext.cpp ← lj_cut_gpu.cpp}
	V			lib/gpu/{lal_morse.cpp ← morse_gpu_memory.cpp}
	A			lib/gpu/lal_morse.cu
	V			lib/gpu/{lal_morse.h ← morse_gpu_memory.h}
	V			lib/gpu/{lal_morse_ext.cpp ← morse_gpu.cpp}
	V			lib/gpu/{lal_neighbor.cpp ← pair_gpu_nbor.cpp}
	V			lib/gpu/{lal_neighbor.h ← pair_gpu_nbor.h}
	A			lib/gpu/lal_neighbor_cpu.cu
	V			lib/gpu/{lal_neighbor_gpu.cu ← pair_gpu_build_kernel.cu}
	A			lib/gpu/lal_neighbor_shared.cpp
	A			lib/gpu/lal_neighbor_shared.h
	V			lib/gpu/{lal_pppm.cpp ← pppm_gpu_memory.cpp}
	V			lib/gpu/{lal_pppm.cu ← pppm_gpu_kernel.cu}
	V			lib/gpu/{lal_pppm.h ← pppm_gpu_memory.h}
	V			lib/gpu/{lal_pppm_ext.cpp ← pppm_l_gpu.cpp}
	V			lib/gpu/{lal_precision.h ← pair_gpu_precision.h}
	A			lib/gpu/lal_preprocessor.h
	V			lib/gpu/{lal_re_squared.cpp ← re_squared.cpp}
	V			lib/gpu/{lal_re_squared.cu ← re_squared.cu}
	V			lib/gpu/{lal_re_squared.h ← re_squared.h}
	V			lib/gpu/{lal_re_squared_ext.cpp ← re_squared_ext.cpp}
	V			lib/gpu/{lal_re_squared_lj.cu ← re_squared_lj.cu}
	V			lib/gpu/{lj96_cut_gpu.cpp → lal_lj96_ext.cpp}
	D			lib/gpu/lj96_cut_gpu_kernel.cu
	V			lib/gpu/{lj96_cut_gpu_memory.cpp → lal_lj96.cpp}
	V			lib/gpu/{lj96_cut_gpu_memory.h → lal_lj96.h}
	V			lib/gpu/{lj_class2_long.cpp → lal_lj_class2_long.cpp}
	V			lib/gpu/{lj_class2_long.cu → lal_lj_class2_long.cu}
	V			lib/gpu/{lj_class2_long.h → lal_lj_class2_long.h}
	V			lib/gpu/{lj_class2_long_ext.cpp → lal_lj_class2_long_ext.cpp}
	V			lib/gpu/{lj_cut_gpu.cpp → lal_lj_ext.cpp}
	D			lib/gpu/lj_cut_gpu_kernel.cu
	V			lib/gpu/{lj_cut_gpu_memory.cpp → lal_lj.cpp}
	V			lib/gpu/{lj_cut_gpu_memory.h → lal_lj.h}
	V			lib/gpu/{lj_expand_gpu.cpp → lal_lj_expand_ext.cpp}
	D			lib/gpu/lj_expand_gpu_kernel.cu
	V			lib/gpu/{lj_expand_gpu_memory.cpp → lal_lj_expand.cpp}
	V			lib/gpu/{lj_expand_gpu_memory.h → lal_lj_expand.h}
	V			lib/gpu/{ljc_cut_gpu.cpp → lal_lj_coul_ext.cpp}
	D			lib/gpu/ljc_cut_gpu_kernel.cu
	V			lib/gpu/{ljc_cut_gpu_memory.cpp → lal_lj_coul.cpp}
	V			lib/gpu/{ljc_cut_gpu_memory.h → lal_lj_coul.h}
	V			lib/gpu/{ljcl_cut_gpu.cpp → lal_lj_coul_long_ext.cpp}
	D			lib/gpu/ljcl_cut_gpu_kernel.cu
	V			lib/gpu/{ljcl_cut_gpu_memory.cpp → lal_lj_coul_long.cpp}
	V			lib/gpu/{ljcl_cut_gpu_memory.h → lal_lj_coul_long.h}
	V			lib/gpu/{morse_gpu.cpp → lal_morse_ext.cpp}
	D			lib/gpu/morse_gpu_kernel.cu
	V			lib/gpu/{morse_gpu_memory.cpp → lal_morse.cpp}
	V			lib/gpu/{morse_gpu_memory.h → lal_morse.h}
	D			lib/gpu/nv_kernel_def.h
	V			lib/gpu/{pair_gpu_ans.cpp → lal_answer.cpp}
	V			lib/gpu/{pair_gpu_ans.h → lal_answer.h}
	V			lib/gpu/{pair_gpu_atom.cpp → lal_atom.cpp}
	V			lib/gpu/{pair_gpu_atom.h → lal_atom.h}
	D			lib/gpu/pair_gpu_atom_kernel.cu
	V			lib/gpu/{pair_gpu_balance.h → lal_balance.h}
	V			lib/gpu/{pair_gpu_build_kernel.cu → lal_neighbor_gpu.cu}
	D			lib/gpu/pair_gpu_dev_kernel.cu
	V			lib/gpu/{pair_gpu_device.cpp → lal_device.cpp}
	V			lib/gpu/{pair_gpu_device.h → lal_device.h}
	V			lib/gpu/{pair_gpu_nbor.cpp → lal_neighbor.cpp}
	V			lib/gpu/{pair_gpu_nbor.h → lal_neighbor.h}
	D			lib/gpu/pair_gpu_nbor_kernel.cu
	D			lib/gpu/pair_gpu_nbor_shared.cpp
	D			lib/gpu/pair_gpu_nbor_shared.h
	V			lib/gpu/{pair_gpu_precision.h → lal_precision.h}
	D			lib/gpu/pair_win_sort.cpp
	V			lib/gpu/{pppm_gpu_kernel.cu → lal_pppm.cu}
	V			lib/gpu/{pppm_gpu_memory.cpp → lal_pppm.cpp}
	V			lib/gpu/{pppm_gpu_memory.h → lal_pppm.h}
	V			lib/gpu/{pppm_l_gpu.cpp → lal_pppm_ext.cpp}
	V			lib/gpu/{re_squared.cpp → lal_re_squared.cpp}
	V			lib/gpu/{re_squared.cu → lal_re_squared.cu}
	V			lib/gpu/{re_squared.h → lal_re_squared.h}
	V			lib/gpu/{re_squared_ext.cpp → lal_re_squared_ext.cpp}
	V			lib/gpu/{re_squared_lj.cu → lal_re_squared_lj.cu}