Merge branch 'master' into feat/adjust_visualisation
b63a2cc70f21
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Authored by RLeute on Jan 21 2019, 14:21.

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Merge branch 'master' into feat/adjust_visualisation

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Committed

RLeute

Jan 21 2019, 14:21

Pushed

RLeute

Jan 21 2019, 14:50

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rMUSPECTREdd1058b3ed37: Merge branch 'feat/adjust_visualisation' of ssh://c4science.ch/source/muSpectre…
rMUSPECTRE3bc6fa3694d8: ENH: Added Material Evaluator

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RLeute committed rMUSPECTREb63a2cc70f21: Merge branch 'master' into feat/adjust_visualisation (authored by RLeute).Jan 21 2019, 14:21

Merged Changes

Commit		Author	Details	Committed
3bc6fa3694d8	D234	junge	ENH: Added Material Evaluator	Jan 21 2019
676022f5dfa6	D224	junge	fixed pull-back for MaterialHyperElastoPlastic1	Jan 7 2019
ee949b1469ba	D232	junge	ENH: added MaterialLinearElasticGeneric2	Dec 21 2018
d7e113f47457	D230	junge	ENH: Python Bindings for Generic Linear Elastic Material + doc	Dec 20 2018
92fa33a1065f	D229	muSpectre-bot	MAINT: improved linting	Dec 12 2018
bdcd2d2db5b4	D226	junge/muSpectre-bot	linted entire c++ code base, added clang-format config and cpplint	Dec 12 2018
efec0cbbf093	D227	pastewka	MAINT: Fixes on OS X - exclude deprecation warnings in pybind11 and add library…	Dec 11 2018
46632033a7cc		junge	minor comment change	Dec 9 2018
293be346d221	D211	junge	License switch to LGPL	Nov 20 2018

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				Path
	A			"snippets/\302\265Spectre_cmake_header"
	M			"snippets/\302\265Spectre_cpp_header"
	M			"snippets/\302\265Spectre_py_header"
	A			.clang-format
	M			CMakeLists.txt
	A			CPPLINT.cfg
	P			GLPv3 Copied from LICENSE
	P			LICENSE Copied to GLPv3
	M			bin/demonstrator1.cc
	M			bin/demonstrator2.cc
	M			bin/demonstrator_dynamic_solve.cc
	M			bin/demonstrator_mpi.cc
	A			bin/elasto_plastic_comparison.py
	M			bin/hyper-elasticity.cc
	M			bin/hyper-elasticity.py
	A			bin/odd_image.npz
	M			bin/small_case.cc
	M			bin/small_case.py
	A			bin/small_elasto_plastic_case.py
	A			cmake/cpplint.cmake
	M			doc/CMakeLists.txt
	M			doc/dev-docs/source/CodingConvention.rst
	A			doc/dev-docs/source/ConstitutiveLaws.rst
	M			doc/dev-docs/source/Doxyfile
	M			doc/dev-docs/source/GettingStarted.rst
	M			doc/dev-docs/source/License.rst
	A			doc/dev-docs/source/MaterialLinearElasticGeneric.rst
	M			doc/dev-docs/source/NewMaterial.rst
	M			doc/dev-docs/source/conf.py
	M			doc/dev-docs/source/index.rst
	M			dockerfiles/docker_debian_stable
	M			dockerfiles/docker_debian_testing
	A			external/cpplint.py
	M			language_bindings/CMakeLists.txt
	M			language_bindings/python/CMakeLists.txt
	M			language_bindings/python/bind_py_cell.cc
	M			language_bindings/python/bind_py_common.cc
	M			language_bindings/python/bind_py_declarations.hh
	M			language_bindings/python/bind_py_fftengine.cc
	M			language_bindings/python/bind_py_field_collection.cc
	M			language_bindings/python/bind_py_material.cc
	A			language_bindings/python/bind_py_material_hyper_elasto_plastic1.cc
	A			language_bindings/python/bind_py_material_linear_elastic1.cc
	A			language_bindings/python/bind_py_material_linear_elastic2.cc
	A			language_bindings/python/bind_py_material_linear_elastic3.cc
	A			language_bindings/python/bind_py_material_linear_elastic4.cc
	A			language_bindings/python/bind_py_material_linear_elastic_generic.cc
	P			language_bindings/python/bind_py_module.cc Copied to multiple locations: src/materials/stress_transformations_Kirchhoff.hh src/materials/stress_transformations_PK1.hh src/materials/stress_transformations_PK2.hh
	M			language_bindings/python/bind_py_projections.cc
	M			language_bindings/python/bind_py_solvers.cc
	M			language_bindings/python/muSpectre/__init__.py
	M			language_bindings/python/muSpectre/fft.py
	M			src/CMakeLists.txt
	M			src/cell/CMakeLists.txt
	M			src/cell/cell_base.cc
	M			src/cell/cell_base.hh
	M			src/cell/cell_factory.hh
	M			src/cell/cell_traits.hh
	M			src/common/CMakeLists.txt
	M			src/common/T4_map_proxy.hh
	M			src/common/ccoord_operations.hh
	M			src/common/common.cc
	M			src/common/common.hh
	M			src/common/communicator.hh
	M			src/common/eigen_tools.hh
	M			src/common/field.hh
	M			src/common/field_base.hh
	M			src/common/field_collection.hh
	M			src/common/field_collection_base.hh
	M			src/common/field_collection_global.hh
	M			src/common/field_collection_local.hh
	M			src/common/field_helpers.hh
	M			src/common/field_map.hh
	M			src/common/field_map_base.hh
	M			src/common/field_map_dynamic.hh
	M			src/common/field_map_matrixlike.hh
	M			src/common/field_map_scalar.hh
	M			src/common/field_map_tensor.hh
	M			src/common/field_typed.hh
	A			src/common/geometry.hh
	M			src/common/iterators.hh
	A			src/common/ref_array.hh
	M			src/common/statefield.hh
	M			src/common/tensor_algebra.hh
	M			src/common/utilities.hh
	M			src/common/voigt_conversion.hh
	M			src/fft/CMakeLists.txt
	M			src/fft/fft_engine_base.cc
	M			src/fft/fft_engine_base.hh
	M			src/fft/fft_utils.cc
	M			src/fft/fft_utils.hh
	M			src/fft/fftw_engine.cc
	M			src/fft/fftw_engine.hh
	M			src/fft/fftwmpi_engine.cc
	M			src/fft/fftwmpi_engine.hh
	M			src/fft/pfft_engine.cc
	M			src/fft/pfft_engine.hh
	M			src/fft/projection_base.cc
	M			src/fft/projection_base.hh
	M			src/fft/projection_default.cc
	M			src/fft/projection_default.hh
	M			src/fft/projection_finite_strain.cc
	M			src/fft/projection_finite_strain.hh
	M			src/fft/projection_finite_strain_fast.cc
	M			src/fft/projection_finite_strain_fast.hh
	M			src/fft/projection_small_strain.cc
	M			src/fft/projection_small_strain.hh
	M			src/materials/CMakeLists.txt
	M			src/materials/material_base.cc
	M			src/materials/material_base.hh
	A			src/materials/material_evaluator.hh
	M			src/materials/material_hyper_elasto_plastic1.cc
	M			src/materials/material_hyper_elasto_plastic1.hh
	M			src/materials/material_linear_elastic1.cc
	M			src/materials/material_linear_elastic1.hh
	M			src/materials/material_linear_elastic2.cc
	M			src/materials/material_linear_elastic2.hh
	M			src/materials/material_linear_elastic3.cc
	M			src/materials/material_linear_elastic3.hh
	M			src/materials/material_linear_elastic4.cc
	M			src/materials/material_linear_elastic4.hh
	V			src/materials/{material_linear_elastic_generic.cc → material_linear_elastic_generic1.cc}
	D			src/materials/material_linear_elastic_generic.hh
	V			src/materials/{material_linear_elastic_generic1.cc ← material_linear_elastic_generic.cc}
	A			src/materials/material_linear_elastic_generic1.hh
	A			src/materials/material_linear_elastic_generic2.cc
	A			src/materials/material_linear_elastic_generic2.hh
	M			src/materials/material_muSpectre_base.hh
	M			src/materials/materials_toolbox.hh
	A			src/materials/stress_transformations.hh
	P			src/materials/stress_transformations_Kirchhoff.hh Copied from language_bindings/python/bind_py_module.cc
	A			src/materials/stress_transformations_Kirchhoff_impl.hh
	P			src/materials/stress_transformations_PK1.hh Copied from language_bindings/python/bind_py_module.cc
	A			src/materials/stress_transformations_PK1_impl.hh
	P			src/materials/stress_transformations_PK2.hh Copied from language_bindings/python/bind_py_module.cc
	A			src/materials/stress_transformations_PK2_impl.hh
	A			src/materials/stress_transformations_default_case.hh
	M			src/solver/CMakeLists.txt
	M			src/solver/deprecated_solver_base.cc
	M			src/solver/deprecated_solver_base.hh
	M			src/solver/deprecated_solver_cg.cc
	M			src/solver/deprecated_solver_cg.hh
	M			src/solver/deprecated_solver_cg_eigen.cc
	M			src/solver/deprecated_solver_cg_eigen.hh
	M			src/solver/deprecated_solvers.cc
	M			src/solver/deprecated_solvers.hh
	M			src/solver/solver_base.cc
	M			src/solver/solver_base.hh
	M			src/solver/solver_cg.cc
	M			src/solver/solver_cg.hh
	M			src/solver/solver_common.cc
	M			src/solver/solver_common.hh
	M			src/solver/solver_eigen.cc
	M			src/solver/solver_eigen.hh
	M			src/solver/solvers.cc
	M			src/solver/solvers.hh
	M			tests/header_test_ccoord_operations.cc
	M			tests/header_test_eigen_tools.cc
	M			tests/header_test_field_collections.cc
	M			tests/header_test_fields.cc
	M			tests/header_test_raw_field_map.cc
	A			tests/header_test_ref_array.cc
	M			tests/header_test_statefields.cc
	M			tests/header_test_t4_map.cc
	M			tests/header_test_tensor_algebra.cc
	M			tests/main_test_suite.cc
	M			tests/mpi_context.hh
	M			tests/mpi_main_test_suite.cc
	M			tests/mpi_test_fft_engine.cc
	M			tests/mpi_test_projection.hh
	M			tests/mpi_test_projection_finite.cc
	M			tests/mpi_test_projection_small.cc
	M			tests/mpi_test_solver_newton_cg.cc
	A			tests/py_comparison_test_material_hyper_elasto_plastic1.cc
	A			tests/py_comparison_test_material_hyper_elasto_plastic1.py
	A			tests/py_comparison_test_material_linear_elastic1.cc
	A			tests/py_comparison_test_material_linear_elastic1.py
	M			tests/python_binding_tests.py
	A			tests/python_exact_reference_elastic_test.py
	A			tests/python_exact_reference_plastic_test.py
	M			tests/python_fft_tests.py
	M			tests/python_field_tests.py
	M			tests/python_goose_ref.py
	A			tests/python_material_evaluator_test.py
	M			tests/python_material_linear_elastic3_test.py
	M			tests/python_material_linear_elastic4_test.py
	A			tests/python_material_linear_elastic_generic1_test.py
	A			tests/python_material_linear_elastic_generic2_test.py
	A			tests/python_material_linear_elastic_generic_test.py
	M			tests/python_mpi_binding_tests.py
	M			tests/python_mpi_material_linear_elastic4_test.py
	M			tests/python_mpi_projection_tests.py
	M			tests/python_projection_tests.py
	M			tests/python_test_imports.py
	M			tests/test_base.cc
	M			tests/test_cell_base.cc
	M			tests/test_fft_utils.cc
	M			tests/test_fftw_engine.cc
	M			tests/test_field_collections.hh
	A			tests/test_field_collections_1.cc
	A			tests/test_field_collections_2.cc
	A			tests/test_field_collections_3.cc
	A			tests/test_geometry.cc
	M			tests/test_goodies.hh
	A			tests/test_material_evaluator.cc
	M			tests/test_material_hyper_elasto_plastic1.cc
	M			tests/test_material_linear_elastic1.cc
	M			tests/test_material_linear_elastic2.cc
	M			tests/test_material_linear_elastic3.cc
	M			tests/test_material_linear_elastic4.cc
	M			tests/test_material_linear_elastic_generic.cc
	M			tests/test_materials_toolbox.cc
	M			tests/test_projection.hh
	M			tests/test_projection_finite.cc
	M			tests/test_projection_small.cc
	M			tests/test_solver_newton_cg.cc
	M			tests/tests.hh