Diffusion µSpectre fa590e5a9f93

add_lam_pixels
fa590e5a9f93
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Authored by afalsafi on Feb 28 2019, 14:31.

Description

Merge branch 'feat/split_sub_projects' into feat/add_lam_pixels

Details

Committed

afalsafi

Feb 28 2019, 14:31

Pushed

afalsafi

Feb 28 2019, 19:19

Parents

rMUSPECTRE20c42e4cac79: Merge branch 'master' into feat/add_lam_pixels
rMUSPECTRE70e0b5c4f203: ENH: added gitlab ci

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Event Timeline

afalsafi committed rMUSPECTREfa590e5a9f93: Merge branch 'feat/split_sub_projects' into feat/add_lam_pixels (authored by afalsafi).Feb 28 2019, 14:31

Restricted Application failed to build Restricted Buildable!Feb 28 2019, 19:35

Merged Changes

Commit	Author	Details	Committed
70e0b5c4f203	muSpectre-bot	ENH: added gitlab ci	Feb 28 2019
127ca05ecd4e	junge	BUG: fixed python test	Feb 28 2019
5b4a8246dd07	junge	BUG: compiles with MPI turned on now	Feb 27 2019
9e3d99caa0d9	richart	Spliting the tests and adding a "enum" like choice in cmake	Feb 7 2019
4ef518104434	richart	WIP: adding export of targets and option to activate only muFFT or muGrid	Jan 28 2019
b6e4d96f59bc	richart	WIP: Renaming the option in CI too	Jan 28 2019
02715ad30a63	richart	WIP: trying to correct for the ci that does not seam to follow cmake…	Jan 27 2019
8b933e7abd6c	richart	WIP: typo correction set->option	Jan 27 2019
d3e288fe32ce	richart	WIP: Rewrite of some piece of cmake to "clean" the main CMakeLists	Jan 27 2019
27287cdad1b6	richart	WIP: compiles and test passing for the split	Jan 27 2019
b991c3bafbda	richart	WIP: made the test compile	Jan 27 2019
6483fc77273a	richart	WIP: changing the namespace for the sub libraries	Jan 25 2019
9a8c01182833	richart	WIP: renaming the sub-projects folders	Jan 24 2019
3445f30582b8	richart	Merge branch 'feat/split_sub_projects' of ssh://c4science.ch/source/muSpectre…	Jan 24 2019
5070196c796b	richart	WIP: splitting cmake in sub-projects	Jan 24 2019
d6e947532faf	junge	split the common.hh	Jan 24 2019
9f91923084fe	junge	WIP started splitting code base	Jan 24 2019

Changes (248)
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		Path
A		.gitlab-ci.yml
M		CMakeLists.txt
M		Jenkinsfile
A		bin/CMakeLists.txt
M		bin/demonstrator1.cc
M		bin/demonstrator2.cc
M		bin/demonstrator_dynamic_solve.cc
M		bin/demonstrator_mpi.cc
M		bin/hyper-elasticity.cc
M		bin/small_case.cc
A		cmake/FindFFTW3.cmake
A		cmake/muTools.cmake
M		cmake/muspectreTools.cmake
M		doc/dev-docs/source/CodingConvention.rst
M		doc/dev-docs/source/ConstitutiveLaws.rst
A		external/CMakeLists.txt
M		language_bindings/python/CMakeLists.txt
M		language_bindings/python/bind_py_cell.cc
M		language_bindings/python/bind_py_common.cc
M		language_bindings/python/bind_py_fftengine.cc
M		language_bindings/python/bind_py_field_collection.cc
M		language_bindings/python/bind_py_material.cc
M		language_bindings/python/bind_py_material_hyper_elasto_plastic1.cc
M		language_bindings/python/bind_py_material_linear_elastic1.cc
M		language_bindings/python/bind_py_material_linear_elastic2.cc
M		language_bindings/python/bind_py_material_linear_elastic3.cc
M		language_bindings/python/bind_py_material_linear_elastic4.cc
M		language_bindings/python/bind_py_projections.cc
M		language_bindings/python/bind_py_solvers.cc
M		src/CMakeLists.txt
M		src/cell/cell_base.cc
M		src/cell/cell_base.hh
M		src/cell/cell_factory.hh
M		src/cell/cell_traits.hh
V		src/{common → libmugrid}/T4_map_proxy.hh
V		src/{common → libmugrid}/ccoord_operations.hh
M		src/common/common.cc
V		src/common/{common.hh → muSpectre_common.hh}
V		src/{common → libmufft}/communicator.hh
V		src/{common → libmugrid}/eigen_tools.hh
V		src/{common → libmugrid}/field.hh
V		src/{common → libmugrid}/field_base.hh
P		src/common/field_collection.hh Deleted after being copied to multiple locations: src/libmugrid/field_collection.hh tests/libmufft/tests.hh
V		src/{common → libmugrid}/field_collection_base.hh
V		src/{common → libmugrid}/field_collection_global.hh
V		src/{common → libmugrid}/field_collection_local.hh
V		src/{common → libmugrid}/field_helpers.hh
V		src/{common → libmugrid}/field_map.hh
V		src/{common → libmugrid}/field_map_base.hh
V		src/{common → libmugrid}/field_map_dynamic.hh
V		src/{common → libmugrid}/field_map_matrixlike.hh
V		src/{common → libmugrid}/field_map_scalar.hh
V		src/{common → libmugrid}/field_map_tensor.hh
V		src/{common → libmugrid}/field_typed.hh
M		src/common/geometry.hh
V		src/{common → libmugrid}/iterators.hh
V		src/common/{muSpectre_common.hh ← common.hh}
V		src/{common → libmugrid}/ref_array.hh
V		src/{common → libmugrid}/statefield.hh
V		src/{common → libmugrid}/tensor_algebra.hh
V		src/{common/utilities.hh → libmugrid/cpp_compliance.hh}
M		src/common/voigt_conversion.hh
D		src/fft
D		src/fft/CMakeLists.txt
V		src/{fft → libmufft}/fft_engine_base.cc
V		src/{fft → libmufft}/fft_engine_base.hh
V		src/{fft → libmufft}/fft_utils.cc
V		src/{fft → libmufft}/fft_utils.hh
V		src/{fft → libmufft}/fftw_engine.cc
V		src/{fft → libmufft}/fftw_engine.hh
V		src/{fft → libmufft}/fftwmpi_engine.cc
V		src/{fft → libmufft}/fftwmpi_engine.hh
V		src/{fft → libmufft}/pfft_engine.cc
V		src/{fft → libmufft}/pfft_engine.hh
V		src/{fft → projection}/projection_base.cc
V		src/{fft → projection}/projection_base.hh
V		src/{fft → projection}/projection_default.cc
V		src/{fft → projection}/projection_default.hh
V		src/{fft → projection}/projection_finite_strain.cc
V		src/{fft → projection}/projection_finite_strain.hh
V		src/{fft → projection}/projection_finite_strain_fast.cc
V		src/{fft → projection}/projection_finite_strain_fast.hh
V		src/{fft → projection}/projection_small_strain.cc
V		src/{fft → projection}/projection_small_strain.hh
A	(dir)	src/libmufft/
A		src/libmufft/CMakeLists.txt
V		src/{libmufft ← common}/communicator.hh
V		src/{libmufft ← fft}/fft_engine_base.cc
V		src/{libmufft ← fft}/fft_engine_base.hh
V		src/{libmufft ← fft}/fft_utils.cc
V		src/{libmufft ← fft}/fft_utils.hh
V		src/{libmufft ← fft}/fftw_engine.cc
V		src/{libmufft ← fft}/fftw_engine.hh
V		src/{libmufft ← fft}/fftwmpi_engine.cc
V		src/{libmufft ← fft}/fftwmpi_engine.hh
A		src/libmufft/mufft_common.hh
V		src/{libmufft ← fft}/pfft_engine.cc
V		src/{libmufft ← fft}/pfft_engine.hh
A	(dir)	src/libmugrid/
A		src/libmugrid/CMakeLists.txt
V		src/{libmugrid ← common}/T4_map_proxy.hh
V		src/{libmugrid ← common}/ccoord_operations.hh
V		src/{libmugrid/cpp_compliance.hh ← common/utilities.hh}
V		src/{libmugrid ← common}/eigen_tools.hh
V		src/{libmugrid ← common}/field.hh
V		src/{libmugrid ← common}/field_base.hh
P		src/libmugrid/field_collection.hh Copied from src/common/field_collection.hh
V		src/{libmugrid ← common}/field_collection_base.hh
V		src/{libmugrid ← common}/field_collection_global.hh
V		src/{libmugrid ← common}/field_collection_local.hh
V		src/{libmugrid ← common}/field_helpers.hh
V		src/{libmugrid ← common}/field_map.hh
V		src/{libmugrid ← common}/field_map_base.hh
V		src/{libmugrid ← common}/field_map_dynamic.hh
V		src/{libmugrid ← common}/field_map_matrixlike.hh
V		src/{libmugrid ← common}/field_map_scalar.hh
V		src/{libmugrid ← common}/field_map_tensor.hh
V		src/{libmugrid ← common}/field_typed.hh
A		src/libmugrid/grid_common.hh
V		src/{libmugrid ← common}/iterators.hh
V		src/{libmugrid ← common}/ref_array.hh
V		src/{libmugrid ← common}/statefield.hh
V		src/{libmugrid ← common}/tensor_algebra.hh
D		src/materials/material.hh~
M		src/materials/material_base.cc
M		src/materials/material_base.hh
M		src/materials/material_evaluator.hh
M		src/materials/material_hyper_elasto_plastic1.cc
M		src/materials/material_hyper_elasto_plastic1.hh
M		src/materials/material_linear_elastic1.hh
M		src/materials/material_linear_elastic2.cc
M		src/materials/material_linear_elastic2.hh
M		src/materials/material_linear_elastic3.cc
M		src/materials/material_linear_elastic3.hh
M		src/materials/material_linear_elastic4.cc
M		src/materials/material_linear_elastic4.hh
M		src/materials/material_linear_elastic_generic1.cc
M		src/materials/material_linear_elastic_generic1.hh
M		src/materials/material_linear_elastic_generic2.cc
M		src/materials/material_linear_elastic_generic2.hh
M		src/materials/material_muSpectre_base.hh
M		src/materials/materials_toolbox.hh
M		src/materials/stress_transformations.hh
M		src/materials/stress_transformations_Kirchhoff_impl.hh
M		src/materials/stress_transformations_PK1_impl.hh
M		src/materials/stress_transformations_PK2_impl.hh
M		src/materials/stress_transformations_default_case.hh
A	(dir)	src/projection/
A		src/projection/CMakeLists.txt
V		src/{projection ← fft}/projection_base.cc
V		src/{projection ← fft}/projection_base.hh
V		src/{projection ← fft}/projection_default.cc
V		src/{projection ← fft}/projection_default.hh
V		src/{projection ← fft}/projection_finite_strain.cc
V		src/{projection ← fft}/projection_finite_strain.hh
V		src/{projection ← fft}/projection_finite_strain_fast.cc
V		src/{projection ← fft}/projection_finite_strain_fast.hh
V		src/{projection ← fft}/projection_small_strain.cc
V		src/{projection ← fft}/projection_small_strain.hh
M		src/solver/deprecated_solver_base.cc
M		src/solver/deprecated_solver_base.hh
M		src/solver/deprecated_solver_cg.cc
M		src/solver/deprecated_solver_cg.hh
M		src/solver/deprecated_solver_cg_eigen.hh
M		src/solver/deprecated_solvers.cc
M		src/solver/solver_cg.cc
M		src/solver/solver_common.hh
M		src/solver/solver_eigen.hh
M		src/solver/solvers.cc
A		tests/CMakeLists.txt
V		tests/{ → libmugrid}/header_test_ccoord_operations.cc
V		tests/{ → libmugrid}/header_test_eigen_tools.cc
V		tests/{ → libmugrid}/header_test_field_collections.cc
V		tests/{ → libmugrid}/header_test_fields.cc
V		tests/{ → libmugrid}/header_test_raw_field_map.cc
V		tests/{ → libmugrid}/header_test_ref_array.cc
V		tests/{ → libmugrid}/header_test_statefields.cc
V		tests/{ → libmugrid}/header_test_t4_map.cc
V		tests/{ → libmugrid}/header_test_tensor_algebra.cc
A	(dir)	tests/libmufft/
A		tests/libmufft/CMakeLists.txt
P		tests/libmufft/main_test_suite.cc Copied from tests/tests.hh
P		tests/libmufft/mpi_context.hh Copied from tests/mpi_context.hh
P		tests/libmufft/mpi_main_test_suite.cc Copied from tests/tests.hh
V		tests/{libmufft ← }/mpi_test_fft_engine.cc
P		tests/libmufft/python_binding_tests.py Copied from tests/python_mpi_binding_tests.py
V		tests/{libmufft ← }/python_fft_tests.py
V		tests/{libmufft ← }/python_goose_ref.py
P		tests/libmufft/python_mpi_binding_tests.py Copied from tests/python_mpi_binding_tests.py
V		tests/{libmufft ← }/python_mpi_projection_tests.py
V		tests/{libmufft ← }/python_projection_tests.py
P		tests/libmufft/python_test_imports.py Copied from tests/python_test_imports.py
V		tests/{libmufft ← }/test_fft_utils.cc
V		tests/{libmufft ← }/test_fftw_engine.cc
V		{tests/libmufft/tests.hh ← src/common/field_collection.hh}
A	(dir)	tests/libmugrid/
A		tests/libmugrid/CMakeLists.txt
V		tests/{libmugrid ← }/header_test_ccoord_operations.cc
V		tests/{libmugrid ← }/header_test_eigen_tools.cc
V		tests/{libmugrid ← }/header_test_field_collections.cc
V		tests/{libmugrid ← }/header_test_fields.cc
V		tests/{libmugrid ← }/header_test_raw_field_map.cc
V		tests/{libmugrid ← }/header_test_ref_array.cc
V		tests/{libmugrid ← }/header_test_statefields.cc
V		tests/{libmugrid ← }/header_test_t4_map.cc
V		tests/{libmugrid ← }/header_test_tensor_algebra.cc
P		tests/libmugrid/main_test_suite.cc Copied from tests/tests.hh
V		tests/{libmugrid ← }/test_field_collections.hh
V		tests/{libmugrid ← }/test_field_collections_1.cc
V		tests/{libmugrid ← }/test_field_collections_2.cc
V		tests/{libmugrid ← }/test_field_collections_3.cc
V		tests/{libmugrid ← }/test_goodies.hh
P		tests/libmugrid/tests.hh Copied from tests/tests.hh
P		tests/mpi_context.hh Copied to tests/libmufft/mpi_context.hh
V		tests/{ → libmufft}/mpi_test_fft_engine.cc
M		tests/mpi_test_projection.hh
M		tests/mpi_test_projection_finite.cc
M		tests/mpi_test_projection_small.cc
M		tests/mpi_test_solver_newton_cg.cc
M		tests/python_binding_tests.py
V		tests/{ → libmufft}/python_fft_tests.py
V		tests/{ → libmufft}/python_goose_ref.py
P		tests/python_mpi_binding_tests.py Copied to multiple locations: tests/libmufft/python_binding_tests.py tests/libmufft/python_mpi_binding_tests.py
V		tests/{ → libmufft}/python_mpi_projection_tests.py
V		tests/{ → libmufft}/python_projection_tests.py
P		tests/python_test_imports.py Copied to tests/libmufft/python_test_imports.py
M		tests/test_cell_base.cc
V		tests/{ → libmufft}/test_fft_utils.cc
V		tests/{ → libmufft}/test_fftw_engine.cc
V		tests/{ → libmugrid}/test_field_collections.hh
V		tests/{ → libmugrid}/test_field_collections_1.cc
V		tests/{ → libmugrid}/test_field_collections_2.cc
V		tests/{ → libmugrid}/test_field_collections_3.cc
M		tests/test_geometry.cc
V		tests/{ → libmugrid}/test_goodies.hh
M		tests/test_material_evaluator.cc
M		tests/test_material_hyper_elasto_plastic1.cc
M		tests/test_material_linear_elastic1.cc
M		tests/test_material_linear_elastic2.cc
M		tests/test_material_linear_elastic3.cc
M		tests/test_material_linear_elastic4.cc
M		tests/test_material_linear_elastic_generic.cc
M		tests/test_materials_toolbox.cc
M		tests/test_projection.hh
M		tests/test_projection_finite.cc
M		tests/test_projection_small.cc
M		tests/test_solver_newton_cg.cc
P		tests/tests.hh Copied to multiple locations: tests/libmufft/main_test_suite.cc tests/libmufft/mpi_main_test_suite.cc tests/libmugrid/main_test_suite.cc tests/libmugrid/tests.hh