Diffusion EB_ECG_Smart_Resampler (master) History

History
master33a5ad69a17cac337d60ced…

Mar 1 2023

Merge branch 'master' of ssh://c4science.ch/source/EB_ECG_Smart_Resampler
33a5ad69a17c
·branch: master
·zanoli on Mar 1 2023, 18:38.
git is a baaaaad
ec0b909399df
·zanoli on Mar 1 2023, 18:38.
Merge branch 'master' of ssh://c4science.ch/source/EB_ECG_Smart_Resampler
96b15d8d4742
·zanoli on Mar 1 2023, 18:19.
FML
d2d2cea87cd4
·zanoli on Mar 1 2023, 18:17.

Feb 18 2022

Merge branch 'master' of ssh://c4science.ch/source/EB_ECG_Smart_Resampler
70e7da61db71
·zanoli on Feb 18 2022, 14:48.
minor corrections
c2d65d11b95b
·zanoli on Feb 18 2022, 14:48.
compute srf test
b8eb117b58e5
·zanoli on Feb 18 2022, 14:47.

Feb 5 2022

Tidied the source directory, Added atwo custom scripts for templates…
0abaa8da62d8
·zanoli on Feb 5 2022, 00:53.

Feb 2 2022

corrected typos in the final results computation
dc92a5697bca
·zanoli on Feb 2 2022, 15:24.
Added general results computation for each level
e2736b2a3ce9
·zanoli on Feb 2 2022, 13:35.

Aug 9 2021

Modified printing statements to be clearer
01612a9eafeb
·zanoli on Aug 9 2021, 11:13.

Aug 4 2021

found and solved a condition that stalled the delineation
6e7760f922c1
·zanoli on Aug 4 2021, 13:58.
decresed the maximum time given to ecgpuwave to complete from 20 to 7: this…
2ed8f4f252e8
·zanoli on Aug 4 2021, 09:20.

Aug 3 2021

Improved segment warping: solving a bug that wrongly overwrote some segments…
77b84640d2d9
·zanoli on Aug 3 2021, 09:44.

Jul 28 2021

now the time-weight in ddtw is parametrized and can be used at a param at launch
4ffe136cef7b
·zanoli on Jul 28 2021, 11:33.

Jul 27 2021

rolling back to a moderate value (last test wrongly executed)
13135ecf42d0
·zanoli on Jul 27 2021, 17:02.
incresed time lassoo in ddtw_tv to aggressive values so to check the effect…
e54d62526d13
·zanoli on Jul 27 2021, 15:24.
increased weight on timing informations in ddtw_tv
ffe27f9d3644
·zanoli on Jul 27 2021, 13:36.
changed timing weight in ddtw_tv
3a0fb7fbbc1b
·zanoli on Jul 27 2021, 11:18.

Jul 26 2021

increased the skip timing to 300 seconds if the delinaetor fails
7ff9fe139469
·zanoli on Jul 26 2021, 18:29.
implemented differential event based dtw
11d8b01b919e
·zanoli on Jul 26 2021, 17:17.

Jul 22 2021

improved previous design still using dtw standard
e4f549251283
·zanoli on Jul 22 2021, 09:08.

Jul 21 2021

introduced delineation, snd dtw distance results. Started working on a new…
4f188a597f80
·zanoli on Jul 21 2021, 10:47.

Jul 13 2021

introduced an "improved" version of wfdb.csv2mit. Before, the changes where…
cc6275032061
·zanoli on Jul 13 2021, 10:45.
keeping csv data: analyze the wfdb behaviour after
23e3553d5483
·zanoli on Jul 13 2021, 09:27.
correction on saturation value. delineator still missbehaving
977e896bd63b
·zanoli on Jul 13 2021, 08:58.

Jul 12 2021

chenged timout value for ecgpuwave to accomodate slower executions
c5717cdf795f
·zanoli on Jul 12 2021, 23:48.
typo
5c9417021682
·zanoli on Jul 12 2021, 23:18.
temporary patch to obtain results: ECGPUwave is timeouted after 20 seconds to…
4efb4de0d1dd
·zanoli on Jul 12 2021, 22:44.
improved messages clarity
ea37b0c3740f
·zanoli on Jul 12 2021, 16:55.
changed dataset extraction. moved from RMS to PRD
90fcc84d551d
·zanoli on Jul 12 2021, 15:41.

Jul 6 2021

added timing mode informations
09f590a7db7a
·zanoli on Jul 6 2021, 09:16.

Jul 5 2021

updated gitignore to ignore the results folder Redirected output to a custom…
75b9d987728b
·zanoli on Jul 5 2021, 10:06.

Jul 2 2021

implemented parellilization on the levels
31ba1cc79c2a
·zanoli on Jul 2 2021, 20:12.
Implemented multiple sre-sampling methods composite evaluation
86a8dbbeed4e
·zanoli on Jul 2 2021, 16:08.

Jul 1 2021

improved the ADC definition, implemented multiple resampling strategies
18c781f384f3
·zanoli on Jul 1 2021, 23:10.

Jun 29 2021

implemented 0-ing at start and stop of beats in precise computation, solved…
2cfb3c7189fa
·zanoli on Jun 29 2021, 23:36.
added precise implementation of EB-sampler
c0304195e13a
·zanoli on Jun 29 2021, 12:55.

Jun 23 2021

minor semantical improvements. Started working on the exact algorithm that…
9d89081049df
·zanoli on Jun 23 2021, 20:20.

Jun 21 2021

lowered median filter size
17df50ff95cb
·zanoli on Jun 21 2021, 17:53.
changed timing in median filtering
27fdd87a9cb3
·zanoli on Jun 21 2021, 17:22.

Jun 16 2021

modified saved data structure and data handling so to improve memory efficiency
857b7a19d605
·zanoli on Jun 16 2021, 15:28.

Jun 15 2021

changed implementation. Now every level is computed independently. still memory…
d841df4b94d4
·zanoli on Jun 15 2021, 21:30.
solved minor bug that made the median filtering not working properly (due to…
ec54efdf51a0
·zanoli on Jun 15 2021, 00:09.

Jun 14 2021

changed saving method in saving function from custom to pickle. Implemented 0…
ffeb7ccc37d1
·zanoli on Jun 14 2021, 20:27.

Jun 11 2021

improved the lvl crossing algo. Templates estraction now work heyrarcically.
21591c301a81
·zanoli on Jun 11 2021, 09:58.

May 31 2021

imploemented old templates check for inclusion in newly founded clusters
f1b3edc5445c
·zanoli on May 31 2021, 18:57.

May 26 2021

imported and implemented the dinamic time warping distance with a c core.
37b9ac8ac1d2
·zanoli on May 26 2021, 21:25.

May 6 2021

Solved minor bug in template selection
27f0563e08c9
·zanoli on May 6 2021, 11:04.

May 5 2021

implemented harson-darlinghton tes and improved
3dc9b2fb3aaf
·zanoli on May 5 2021, 17:35.

Apr 26 2021

paramterized the percentage of beats per cluster (argument)
94d878c76109
·zanoli on Apr 26 2021, 08:08.

Apr 24 2021

the percentage of points per cluster is now parametric
3bdf124fc9a6
·zanoli on Apr 24 2021, 13:11.
modified the percentage of sampes needed to keep a cluster
1cc7e17978ad
·zanoli on Apr 24 2021, 12:49.

Apr 23 2021

improved templates creation and added logs for time every tramplate was used…
9bf0b9a34009
·zanoli on Apr 23 2021, 18:20.

Apr 16 2021

the saved templates from the progressive template
941532ab8466
·zanoli on Apr 16 2021, 16:21.

Apr 11 2021

updated with cleare names
1a17c0339cac
·zanoli on Apr 11 2021, 11:55.

Mar 31 2021

new method for template recomputation
a7b0b3e4c149
·zanoli on Mar 31 2021, 15:54.

Mar 30 2021

Created a "one shot" multiple template analysis which compute a number of…
d2fe6ee32c71
·zanoli on Mar 30 2021, 00:50.

Mar 27 2021

modified the nemae of some source file with more descriptive and short names.
1132a1c2ca4e
·zanoli on Mar 27 2021, 08:44.

Mar 9 2021

minor bug solution, implemented different type of template
49e4af84b094
·zanoli on Mar 9 2021, 21:30.

Mar 8 2021

implemented segmentation based template reconstr
d8dd706cf7e5
·zanoli on Mar 8 2021, 15:33.

Mar 2 2021

implemented naive template reconstruction. Started implementing segmentation…
a98c388e62ea
·zanoli on Mar 2 2021, 18:55.

Feb 9 2021

It is now possible to build the ECG beat template form a file using "build…
7d3c7a24a03b
·zanoli on Feb 9 2021, 16:35.

Feb 2 2021

better README
6e9602a86ac2
·zanoli on Feb 2 2021, 17:50.
Started investigating the application of DTW to ECG beats. Improved README
c9b1920f53ab
·zanoli on Feb 2 2021, 17:42.
minor bug in import solved
c19eddbf8ee3
·branch: pre_processing
·zanoli on Feb 2 2021, 12:16.
beats extraction and saving of signle beats and generic pre-processing routin…
f2993dcf972e
·zanoli on Feb 2 2021, 12:12.

Jan 31 2021

pruned useless scripts, moved helper script in appropriate folder, introduced…
bdb27637f4f1
·zanoli on Jan 31 2021, 14:54.
introduced test flag
fd6bb630fd60
·zanoli on Jan 31 2021, 10:02.

Jan 30 2021

minor bug in printing performances
81e6d145ac2c
·zanoli on Jan 30 2021, 19:17.
implemented binary data saving, written test to check multicore performances
1d4b15a2a7b4
·zanoli on Jan 30 2021, 18:54.

Jan 29 2021

start to implement a binary data reader/writer for more memory efficient…
3afb8c1493fd
·zanoli on Jan 29 2021, 18:34.
updated gitignore
76b0adc9d1a2
·zanoli on Jan 29 2021, 17:13.
Pre-Proc working in single/few cores.
f9c357776961
·zanoli on Jan 29 2021, 09:14.

Jan 28 2021

still multiproc problems
01e705c99922
·zanoli on Jan 28 2021, 15:02.
sync
72118df04b00
·zanoli on Jan 28 2021, 10:44.
implemented data extraction and lvl crossing. Multiproc. hang randomly
5f168a2338a6
·zanoli on Jan 28 2021, 00:06.

Jan 27 2021

updated gitignore
8ffb3ab1052d
·zanoli on Jan 27 2021, 13:04.

Jan 22 2021

Init repo
3b10a52dbd7b
·zanoli on Jan 22 2021, 16:20.

Historymaster33a5ad69a17cac337d60ced…

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History
master33a5ad69a17cac337d60ced…