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History Graph
Commit | Author | Details | Committed | ||||
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3bc077ccfde7 | thakur | update | Jul 8 2022 | ||||
aa9ceb3fd32d | thakur | update | Jul 8 2022 | ||||
a9a85a0ec07d | thakur | Few tweaks to detect files with'.db' extension. | Mar 21 2022 | ||||
270d85039163 | thakur | Update: normalizing traces for comparison | Mar 18 2021 | ||||
b98bf7969b99 | thakur | IV plotting | Feb 23 2021 | ||||
bda10eb895f3 | thakur | For plotting multiple IVs from Axopatch data | Feb 12 2021 | ||||
a4b7f472c742 | thakur | Fitting and cleaning options added | Feb 12 2021 | ||||
505b82b68186 | thakur | Fitting and cleaning options added | Feb 4 2021 | ||||
c2870d6b9230 | deen | add lowpass to getdata | Aug 20 2020 | ||||
f218b5a0f5a3 | thakur | Added more plotting features: voltage-time, conductance-time, and current-time… | Jun 9 2020 | ||||
2d43f21d943d | thakur | Extracts a part of trace from a raw file | Feb 28 2020 | ||||
223556b72fdc | thakur | Extracts a part of trace from a raw file | Feb 28 2020 | ||||
151c5a45ae59 | thakur | Merge remote-tracking branch 'origin/master' | Feb 12 2020 | ||||
77863b33332e | thakur | Saves the scatter plot figures as vectors | Feb 12 2020 | ||||
9d5adb07ce5b | deen | Added changes to load OPT files from Axopatch (Manunu lab) | Dec 23 2019 | ||||
35975138e060 | deen | forgot to change variable to variable_ | Nov 12 2019 | ||||
f233aca7ab9e | deen | Modified Plotting, should show legend now | Nov 12 2019 | ||||
c1e5ccac9bf8 | deen | Added print saving | Nov 12 2019 | ||||
fb841ce0f885 | deen | Changed histogram color to fill_color | Nov 12 2019 | ||||
086bb13045e3 | deen | Moved old PlotGTauVoltage to EventPlotsOld.py Added new function to save… | Nov 12 2019 | ||||
879b0c898299 | deen | Changed colors of histogram plot | Nov 12 2019 | ||||
aed240124e06 | deen | Modified GetAllvoltages, the list is sorted and converted to a list, rather… | Nov 11 2019 | ||||
b6f82fe2cc56 | deen | Minor fixes. Didn't show IV plot. Incorrect ylabel PlotGTau | Oct 30 2019 | ||||
7b756b3afa8e | thakur | translocation statistics | Oct 4 2019 | ||||
124d8e2ea7d8 | deen | Host on github instead | Sep 25 2019 | ||||
225f919a89a6 | deen | Added example jupyter notebook file | Sep 24 2019 | ||||
7ee1a7bfbad8 | deen | Fixed normalization.... | Sep 24 2019 | ||||
ccc4633b3b86 | deen | incorrect sign........ | Sep 24 2019 | ||||
132c8862bede | deen | Bugfix when no values in x and y while plotting log histogram | Sep 24 2019 | ||||
4978d2d2bd4a | deen | Added log option for histogram | Sep 24 2019 | ||||
cfa8ffed678c | deen | Added showNonFitted to PlotGTau | Sep 24 2019 | ||||
752d85005b4c | deen | Fixed Lowpass of current trace | Sep 24 2019 | ||||
dc1255d0a2c8 | deen | Added LowPassAndResample | Sep 24 2019 | ||||
a5527b525d73 | deen | Merge remote-tracking branch 'origin/master' | Sep 24 2019 | ||||
4724adc4f53c | deen | Disable printing filename | Sep 24 2019 | ||||
c0215aaf1eb6 | thakur | Add voltagelimits | Sep 18 2019 | ||||
80b74d7635bd | thakur | bugfix | Sep 18 2019 | ||||
9365ab63dee7 | thakur | convert rgb color to hex colors | Sep 18 2019 | ||||
9b26f9c5b852 | deen/thakur | Changed colors to seaborn color_palette, number of colors = number of voltages | Sep 18 2019 | ||||
2e077d9d90d8 | thakur | changed SaveG to SavePlot | Sep 12 2019 | ||||
c4f614cd1e61 | thakur | testing commit | Sep 12 2019 | ||||
d54d9e829cb4 | thakur | Merge remote-tracking branch 'origin/master' | Sep 12 2019 | ||||
2b3672ed1749 | thakur | TLs statistics updated | Sep 12 2019 | ||||
4ce46a6e6ab2 | deen | added return value | Aug 7 2019 | ||||
9eba0a7d13c9 | deen | quick fix | Aug 7 2019 | ||||
5873b18544cf | deen | space | Aug 7 2019 | ||||
34e59e08e093 | deen | fix | Aug 7 2019 | ||||
72bad964fbed | deen | Added holoviews histogram plotting | Aug 6 2019 | ||||
b28ac35dd7e5 | deen | x-axis log | Jul 23 2019 | ||||
1c201b3100e9 | deen | Changed to check for string | Jul 23 2019 | ||||
b00190c1d228 | deen | Bugfix | Jul 23 2019 | ||||
81286bc0be01 | deen | PSD plotting | Jul 23 2019 | ||||
2f28106ada13 | deen | bugfix | Jul 22 2019 | ||||
c423162352c9 | deen | merge | Jul 15 2019 | ||||
958801e7521f | deen | Added relative delta for | Jul 15 2019 | ||||
c92f4f7241ef | deen | Merge remote-tracking branch 'origin/Development-of-Analysis-GUI' into… | Jul 15 2019 | ||||
0f9eaf682370 | deen | Added check for small size | Jul 15 2019 | ||||
944ee3a6c923 | Microtubulus <michael.graf> | Fixed the data loading, when no filename is specified. | Jun 28 2019 | ||||
926aeb25e4e0 | Microtubulus <michael.graf> | I made a dirty fix to the IV function since it couldn't plot anything recorded… | Jun 26 2019 | ||||
5db45a4bb67d | Microtubulus <michael.graf> | Implemented low-pass options for the whole trace display to speed things up | Jun 17 2019 | ||||
a59f7d7ae469 | Microtubulus <michael.graf> | The plot that shows the event location within the whole trace is now scalable… | Jun 17 2019 | ||||
9e38a6aefeb4 | Microtubulus <michael.graf> | fixed merge | Jun 14 2019 | ||||
e1fb93801dfb | Microtubulus <michael.graf> | Merge branch 'Development-of-Analysis-GUI' of https://c4science. | Jun 14 2019 | ||||
1b5083aba95d | Microtubulus <michael.graf> | Probably nearly finished | Jun 14 2019 | ||||
f283e2d1368a | deen | Merge remote-tracking branch 'origin/Development-of-Analysis-GUI' into… | Jun 14 2019 | ||||
abcdb00c948e | deen | Analysis UI created | Jun 14 2019 | ||||
992748feefcd | Microtubulus <michael.graf> | latest | Jun 14 2019 | ||||
c60e9dea179e | Microtubulus <michael.graf> | Merge branch 'master' into Development-of-Analysis-GUI | Jun 14 2019 | ||||
f905f230b58c | Microtubulus <michael.graf> | Merge branch 'Development-of-Analysis-GUI' of https://c4science. | Jun 14 2019 | ||||
deb2d51778ee | deen | Initial gui for analysis plotting | Jun 13 2019 | ||||
8574c2881649 | Microtubulus <michael.graf> | Event detector is now running on the selected files. All the files have a… | Jun 13 2019 | ||||
bd4fb7c71584 | Microtubulus <michael.graf> | Plot axes fixes. Other layout fixes. | Jun 13 2019 | ||||
ea7575e2c37f | Microtubulus <michael.graf> | UI elements nearly finished. Plotting implemented. We will need to start to… | Jun 12 2019 | ||||
62e380e32bf3 | deen | Moved sorting | Jun 12 2019 | ||||
6b675b7de877 | deen | Minor cosmetic changes | Jun 12 2019 | ||||
e7f6ab17a17f | deen | Modified MakeIndividualIVs | Jun 12 2019 | ||||
3b8380e96bc8 | deen | Minor changes for plotting Bokeh in Jupyter | Jun 12 2019 | ||||
e377aa3ddf2c | deen | sort Voltages | Jun 12 2019 | ||||
aeb2d8e44532 | deen | changed variable name | Jun 12 2019 | ||||
c46c0a63865b | Microtubulus <michael.graf> | EventDetectorUI: file input with duplicate check. Filter for .dat and .log. | Jun 12 2019 | ||||
b22aa27f135a | Microtubulus <michael.graf> | Jochem's CUSUM eventPlots fix + UI files | Jun 12 2019 | ||||
0c8ace2b9651 | Microtubulus <michael.graf> | Rudimentary template for the UI. | Jun 12 2019 | ||||
34c4670c4cf8 | deen | Merge remote-tracking branch 'origin/master' | Jun 12 2019 | ||||
90792c965edb | deen | disabled nonfitted events by default | Jun 12 2019 | ||||
850d6bde662b | Microtubulus <michael.graf> | I made some changes to the mainplotgui. Mainly coloring, so that voltages… | Jun 12 2019 | ||||
f0ed91619c81 | deen | Added relative delta for CUSUM fitting | Jun 11 2019 | ||||
5708b27f21a2 | deen | Added more printing for debugging | Jun 11 2019 | ||||
3b21f3fa5b7a | deen | Plotting with Currentdrop | Jun 11 2019 | ||||
0a68ff931638 | deen | Added line in EventPlots for plotting in Jupyter Notebook | Jun 11 2019 | ||||
96d8adf9e29d | deen | Changed type of CUSUM fitted events to 'CUSUM' | Jun 11 2019 | ||||
3e86162b8769 | deen | changed eventLengthCUSUM assignation | Jun 11 2019 | ||||
0456ec9b066d | deen | CUSUM needs at least 2 levels, not 3 | Jun 11 2019 | ||||
6546e6f62eaa | deen | Reorganized so event adding is more clear | Jun 11 2019 | ||||
1c05b36cc2be | deen | modified printing | Jun 11 2019 | ||||
46a6544c0236 | deen | Minor changes in printing | Jun 11 2019 | ||||
34ac37040d47 | deen | Added saving of currentDrop for impulse | Jun 11 2019 | ||||
5ffc7919fc39 | deen | modified verboseLevel and added check for integer | Jun 11 2019 | ||||
c21afa3fedea | deen | bugfix | Jun 11 2019 | ||||
f65c960d7cdc | deen | modified check | Jun 11 2019 | ||||
7dfe94a20c40 | deen | Modified coefficients | Jun 11 2019 |
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