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History Graph
| Commit | Author | Details | Committed | ||||
|---|---|---|---|---|---|---|---|
| c92f4f7241ef | deen | Merge remote-tracking branch 'origin/Development-of-Analysis-GUI' into… | Jul 15 2019 | ||||
| 0f9eaf682370 | deen | Added check for small size | Jul 15 2019 | ||||
| 944ee3a6c923 | Microtubulus <michael.graf> | Fixed the data loading, when no filename is specified. | Jun 28 2019 | ||||
| 926aeb25e4e0 | Microtubulus <michael.graf> | I made a dirty fix to the IV function since it couldn't plot anything recorded… | Jun 26 2019 | ||||
| 5db45a4bb67d | Microtubulus <michael.graf> | Implemented low-pass options for the whole trace display to speed things up | Jun 17 2019 | ||||
| a59f7d7ae469 | Microtubulus <michael.graf> | The plot that shows the event location within the whole trace is now scalable… | Jun 17 2019 | ||||
| 9e38a6aefeb4 | Microtubulus <michael.graf> | fixed merge | Jun 14 2019 | ||||
| e1fb93801dfb | Microtubulus <michael.graf> | Merge branch 'Development-of-Analysis-GUI' of https://c4science. | Jun 14 2019 | ||||
| 1b5083aba95d | Microtubulus <michael.graf> | Probably nearly finished | Jun 14 2019 | ||||
| f283e2d1368a | deen | Merge remote-tracking branch 'origin/Development-of-Analysis-GUI' into… | Jun 14 2019 | ||||
| abcdb00c948e | deen | Analysis UI created | Jun 14 2019 | ||||
| 992748feefcd | Microtubulus <michael.graf> | latest | Jun 14 2019 | ||||
| c60e9dea179e | Microtubulus <michael.graf> | Merge branch 'master' into Development-of-Analysis-GUI | Jun 14 2019 | ||||
| f905f230b58c | Microtubulus <michael.graf> | Merge branch 'Development-of-Analysis-GUI' of https://c4science. | Jun 14 2019 | ||||
| deb2d51778ee | deen | Initial gui for analysis plotting | Jun 13 2019 | ||||
| 8574c2881649 | Microtubulus <michael.graf> | Event detector is now running on the selected files. All the files have a… | Jun 13 2019 | ||||
| bd4fb7c71584 | Microtubulus <michael.graf> | Plot axes fixes. Other layout fixes. | Jun 13 2019 | ||||
| ea7575e2c37f | Microtubulus <michael.graf> | UI elements nearly finished. Plotting implemented. We will need to start to… | Jun 12 2019 | ||||
| 62e380e32bf3 | deen | Moved sorting | Jun 12 2019 | ||||
| 6b675b7de877 | deen | Minor cosmetic changes | Jun 12 2019 | ||||
| e7f6ab17a17f | deen | Modified MakeIndividualIVs | Jun 12 2019 | ||||
| 3b8380e96bc8 | deen | Minor changes for plotting Bokeh in Jupyter | Jun 12 2019 | ||||
| e377aa3ddf2c | deen | sort Voltages | Jun 12 2019 | ||||
| aeb2d8e44532 | deen | changed variable name | Jun 12 2019 | ||||
| c46c0a63865b | Microtubulus <michael.graf> | EventDetectorUI: file input with duplicate check. Filter for .dat and .log. | Jun 12 2019 | ||||
| b22aa27f135a | Microtubulus <michael.graf> | Jochem's CUSUM eventPlots fix + UI files | Jun 12 2019 | ||||
| 0c8ace2b9651 | Microtubulus <michael.graf> | Rudimentary template for the UI. | Jun 12 2019 | ||||
| 34c4670c4cf8 | deen | Merge remote-tracking branch 'origin/master' | Jun 12 2019 | ||||
| 90792c965edb | deen | disabled nonfitted events by default | Jun 12 2019 | ||||
| 850d6bde662b | Microtubulus <michael.graf> | I made some changes to the mainplotgui. Mainly coloring, so that voltages… | Jun 12 2019 | ||||
| f0ed91619c81 | deen | Added relative delta for CUSUM fitting | Jun 11 2019 | ||||
| 5708b27f21a2 | deen | Added more printing for debugging | Jun 11 2019 | ||||
| 3b21f3fa5b7a | deen | Plotting with Currentdrop | Jun 11 2019 | ||||
| 0a68ff931638 | deen | Added line in EventPlots for plotting in Jupyter Notebook | Jun 11 2019 | ||||
| 96d8adf9e29d | deen | Changed type of CUSUM fitted events to 'CUSUM' | Jun 11 2019 | ||||
| 3e86162b8769 | deen | changed eventLengthCUSUM assignation | Jun 11 2019 | ||||
| 0456ec9b066d | deen | CUSUM needs at least 2 levels, not 3 | Jun 11 2019 | ||||
| 6546e6f62eaa | deen | Reorganized so event adding is more clear | Jun 11 2019 | ||||
| 1c05b36cc2be | deen | modified printing | Jun 11 2019 | ||||
| 46a6544c0236 | deen | Minor changes in printing | Jun 11 2019 | ||||
| 34ac37040d47 | deen | Added saving of currentDrop for impulse | Jun 11 2019 | ||||
| 5ffc7919fc39 | deen | modified verboseLevel and added check for integer | Jun 11 2019 | ||||
| c21afa3fedea | deen | bugfix | Jun 11 2019 | ||||
| f65c960d7cdc | deen | modified check | Jun 11 2019 | ||||
| 7dfe94a20c40 | deen | Modified coefficients | Jun 11 2019 | ||||
| ebb436057178 | deen | Modified detection of events, added option to fit traces with function and use… | Jun 7 2019 | ||||
| a0bf6cc71c88 | deen | Modified plotting of PSD | May 9 2019 | ||||
| 7004a7213899 | thakur | merge | Apr 29 2019 | ||||
| f3ada36a22f3 | deen/thakur | amazing edits and voltage based plotting by Jochem | Apr 26 2019 | ||||
| dba5e49293d7 | deen | Am idiot, moved up definition of slope, also cleaned up slightly | Apr 8 2019 | ||||
| 2b36f610b798 | deen | Add return for pore size from MakeIndividualIVs | Apr 8 2019 | ||||
| 551a42365c11 | deen | Removed some prints | Apr 3 2019 | ||||
| 9717699af7d3 | deen | Modified where it is absolute | Apr 3 2019 | ||||
| 4b0a6e8f0475 | deen | Set to Mac OS | Apr 3 2019 | ||||
| 24bfd3aa08bb | deen | Default set to ExpFit | Apr 3 2019 | ||||
| 5b31c6b182e4 | deen | Merge remote-tracking branch 'origin/master' | Apr 3 2019 | ||||
| e315497d510a | deen | Absolute value for slope | Apr 3 2019 | ||||
| 58aa40228148 | thakur | Added lines for plotting on Mac OS X | Apr 2 2019 | ||||
| 3b5805684ada | thakur | Fixed stubborn window by adding root withdraw in the end. | Apr 2 2019 | ||||
| a0aa7f4218f0 | thakur | Michaels code modified to import Jochems code. Gives translocation statistics… | Apr 1 2019 | ||||
| 1a44d300663d | deen | Changed classes such that Currentdrop is always mean | Mar 22 2019 | ||||
| 47a96ece775c | deen | import Range1D | Mar 22 2019 | ||||
| 94b4da545ead | deen | Merge branch 'master' of ssh://c4science.ch/source/Nanopore-tools | Mar 22 2019 | ||||
| bac909099f2c | deen | xlim and ylim on figure | Mar 22 2019 | ||||
| 524548c68787 | deen | Removed import EventPlots, was unused | Mar 22 2019 | ||||
| 60231057e4c9 | deen | added limits to the function | Mar 22 2019 | ||||
| c15fa882f3b4 | Axopatch | Merge remote-tracking branch 'origin/master' | Mar 13 2019 | ||||
| f965f55c4d5c | Axopatch | Fixed capital letter | Mar 13 2019 | ||||
| b312fafccb7f | deen | bugfix | Mar 13 2019 | ||||
| 3d74c7680482 | Axopatch | added GetEventTypes | Mar 13 2019 | ||||
| 930e44a351de | Axopatch | Open multiple files | Mar 13 2019 | ||||
| c4a4ce134a66 | Axopatch | Merge remote-tracking branch 'origin/master' | Mar 13 2019 | ||||
| c365cbf76e0b | Microtubulus <michael.graf> | Added Drndic pore estimation. | Feb 28 2019 | ||||
| 819291dbdcac | Axopatch | Slight modification | Feb 25 2019 | ||||
| 23bbd39cbe27 | schneuwly | Added WaveletDenoising function based on DOI: 10.1021/acs.nanolett.8b0438 | Feb 19 2019 | ||||
| 32cc2a9272f4 | Axopatch | Merge remote-tracking branch 'origin/master' | Jan 28 2019 | ||||
| d37dbe352a43 | Axopatch | for PSDs | Jan 28 2019 | ||||
| 321317e9b140 | schneuwly | more docstrings | Jan 27 2019 | ||||
| 978ab3ff6e83 | schneuwly | added docstrings to document some functions | Jan 24 2019 | ||||
| 475f5761a285 | deen | Simplified version of GTau plot using Bokeh | Jan 16 2019 | ||||
| ac035c18794d | deen | Added PSF plotting function | Jan 14 2019 | ||||
| 4992f8975ef8 | deen | Fix plotting of data. Use Math.abs (capital letter for javascript!). Also shows… | Dec 12 2018 | ||||
| 2ba93daf2eed | Axopatch | absolute value of tick | Dec 12 2018 | ||||
| c710ce839009 | Axopatch | Fixed deprecated function in pandas. | Dec 12 2018 | ||||
| 1fbb9b0533a3 | Axopatch | added option to fit IV with exponential | Dec 11 2018 | ||||
| c6b661d2d480 | Axopatch | Added function GetParameters() to see default parameters Changed… | Dec 11 2018 | ||||
| 0e9cb3c37ced | Axopatch | Merge remote-tracking branch 'origin/master' | Dec 10 2018 | ||||
| 0b82d48a1d63 | Axopatch | Clear matplotGui | Dec 10 2018 | ||||
| 9530fc72ff2c | deen | Import Functions in LoadData | Dec 10 2018 | ||||
| 3e9d528dfa0a | deen | added back plotgui.py | Dec 6 2018 | ||||
| e916c0949892 | deen | Added LoadVariable function | Dec 5 2018 | ||||
| 4e1051e88fcb | deen | Removed cutting of FullTrace | Dec 5 2018 | ||||
| 42aa378d194c | deen | Implemented plotting in Bokeh | Dec 5 2018 | ||||
| ce6047fe7825 | deen | Added Plotting function for simple trace plot | Dec 5 2018 | ||||
| f6493234bb87 | deen | Optimized imports, restructured code a bit | Dec 5 2018 | ||||
| f6dac0696a44 | deen | Moved Loading data functions to new script, for easier access. Moved unused… | Dec 5 2018 | ||||
| c174859d5b62 | deen | Cleaning up of git | Dec 5 2018 | ||||
| d20e559ae01d | deen | Added check for length to not show error message if missing data | Dec 5 2018 | ||||
| acffb6d8ec58 | deen | Merge remote-tracking branch 'origin/master' | Dec 4 2018 | ||||
| ecfb78678b73 | deen | changed check to not 0 | Dec 4 2018 |
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