Diffusion FacetNet_python_unil (master) History

History
master3b4f69fd54d000ed937866f…

Nov 3 2021

resolve conflicts
3b4f69fd54d0
·ruegg on Nov 3 2021, 14:57.
turned project into proper python package
9a4638477265
·ruegg on Nov 3 2021, 14:54.

Mar 20 2021

added logging to facetnet_evol
2f0a240929b1
·ruegg on Mar 20 2021, 16:42.
fixed facetnet_evol
8aae8d7f474a
·ruegg on Mar 20 2021, 16:05.

Mar 10 2021

added connectivity matrix permutation
609ef0565200
·ruegg on Mar 10 2021, 10:03.

Mar 9 2021

added connectivity matrix permutation
5236fc5a7a06
·ruegg on Mar 9 2021, 19:09.
code simplification
280dfba73099
·ruegg on Mar 9 2021, 17:33.

Mar 8 2021

fixed experiment 4.1.1 script
d69f0991668d
·ruegg on Mar 8 2021, 18:13.
removed cpp folder
08b5e0f14ef0
·ruegg on Mar 8 2021, 17:19.

Sep 22 2020

small readme change
91bbeea78b38
·ruegg on Sep 22 2020, 16:11.
small readme change
7d95e0842545
·tag: v1.0
·ruegg on Sep 22 2020, 16:02.
citation info updated in readme
0d3991050c87
·ruegg on Sep 22 2020, 16:00.

Oct 28 2019

removed instructions from end of license file
4dd887ca92e0
·ruegg on Oct 28 2019, 16:39.

Aug 16 2019

added condition for saving soft modularity scores only in case of m = -1
813a68e327d5
·ruegg on Aug 16 2019, 14:05.

Aug 15 2019

small readme format change
3f3756336661
·ruegg on Aug 15 2019, 11:28.
small readme format change
dd36e1268fd8
·ruegg on Aug 15 2019, 11:24.
small readme format change
75295451eb94
·ruegg on Aug 15 2019, 11:19.
updated readme with citation details
7d3063391a6f
·ruegg on Aug 15 2019, 11:18.

Aug 13 2019

reformatted readme
bc36ae738595
·tag: v0.9
·ruegg on Aug 13 2019, 13:42.
reformatted readme
b0fb7e038142
·ruegg on Aug 13 2019, 13:39.
reformatted readme
cb693ed9d5c2
·ruegg on Aug 13 2019, 13:34.
reformatted readme
ee25350f658b
·ruegg on Aug 13 2019, 13:31.
Updated license file and licensing information
470e51fb84c1
·ruegg on Aug 13 2019, 13:28.

Aug 9 2019

Deleted synthetic.py
8de6ce11526e
·ruegg on Aug 9 2019, 16:15.
removed files added to gitignore
8eb9dd7e0a65
·ruegg on Aug 9 2019, 16:14.
added readme and license files
6b76b9acefb6
·ruegg on Aug 9 2019, 16:13.
Fixed demography change update
238a32366242
·ruegg on Aug 9 2019, 15:26.

Aug 6 2019

Relaxed convergence property to allow increase of cost function in first 3…
db3bd22b2bcb
·ruegg on Aug 6 2019, 13:00.

Jul 29 2019

Added and tested optimal community number detection
708059180736
·ruegg on Jul 29 2019, 19:39.

Jul 26 2019

Added update function for variable number of clusters. untested, unused.
661ec7a24d6e
·ruegg on Jul 26 2019, 20:05.
Changed code structure, to make it more maintainable. Deleted facetnet_evol…
0a663894723d
·ruegg on Jul 26 2019, 10:35.

Jul 25 2019

Fixed command line argument mismatch
5d36f384f819
·ruegg on Jul 25 2019, 10:00.

Jul 24 2019

wc matrix normalization fixed (not row wise but by total sum). Gives reasonable…
71e0c0fd501e
·ruegg on Jul 24 2019, 18:15.

Jul 22 2019

Added writing evol_net and comm_net to file. Soft modularity not yet working…
cf64c444f5a7
·ruegg on Jul 22 2019, 16:40.
Merge branch 'master' of ssh://c4science.ch/diffusion/9074/facetnet_python
c121dedc5bc4
·ruegg on Jul 22 2019, 12:11.
updated .gitignore to prevent data folders from synching
b6b203866232
·ruegg on Jul 22 2019, 11:57.

Jul 16 2019

created a proper facetnet module. Two scripts to call from console for…
797805a81f91
·ruegg on Jul 16 2019, 15:45.
renamed main file
b4047feeb040
·ruegg on Jul 16 2019, 11:20.
Matrix normalization issue resolved. Optional command line argument for…
384eaa29407f
·ruegg on Jul 16 2019, 11:12.
Merge branch 'master' of ssh://c4science.ch/diffusion/9074/facetnet_python
c2f555c7d3ac
·ruegg on Jul 16 2019, 10:06.
minor local changes
6448f1f838e2
·ruegg on Jul 16 2019, 10:06.
Bug spotted when normalizing matrix rows that are zero
9bfa6eeb8bc2
·ruegg on Jul 16 2019, 10:04.

Jul 12 2019

Changed to weighted adjacancy matrix version. Valuues jump around a bit for…
f926ffc66df7
·ruegg on Jul 12 2019, 10:16.

Jul 8 2019

Update routine corrected with reviously established Ycapital as fixed value per…
f681e0f2a34e
·ruegg on Jul 8 2019, 23:37.

Jul 5 2019

added soft modularity measure and improved convergence property. Still some…
2e8e20306269
·ruegg on Jul 5 2019, 18:20.

Jul 4 2019

soft_comm gives consistent values. comm and evol network not yet (matrix…
1938ea6b10c9
·ruegg on Jul 4 2019, 17:37.
revised update rules again. gamma converges (but then diverges again). dc.I*lc…
a0072e79d70d
·ruegg on Jul 4 2019, 17:06.

Jul 3 2019

revised update rules. There is a problem with xc, lc containing nan
564995a21088
·ruegg on Jul 3 2019, 17:22.

Jul 2 2019

first commit
e05396025c89
·ruegg on Jul 2 2019, 18:52.