Diffusion FENNECS: Finite Element Non-Neutral Electron Cloud Simulator (stable) History

History
stable118e68d1a0d59a4d9ead886…

Oct 5 2021

espic2dhdf5 matlab class is now in one folder This allows to define class…
118e68d1a0d5
·lebars on Oct 5 2021, 16:17.
The weight functions are now defined with pointer to routines A new weight has…
f58c3c134127
·lebars on Oct 5 2021, 16:15.

Sep 27 2021

Added files to gitignore comming from intel profiler
ef78859e7850
·lebars on Sep 27 2021, 10:01.
corrected bug in neut_cold preventing save of cross_sec
d30d66df3cc9
·lebars on Sep 27 2021, 09:55.
Cleaned the matlab folder by creating sub-folders Merged force calculation…
9594cf832648
·lebars on Sep 27 2021, 09:54.

Sep 21 2021

Corrected secind error on E calc for ionisation
410e1782a9ec
·lebars on Sep 21 2021, 09:24.
Corrected errors in collisions for random number calculations Corrected error…
468b7d91706b
·lebars on Sep 21 2021, 09:24.

Sep 17 2021

added check on nudcol dataset existence to avoid write error
687543a1dc40
·lebars on Sep 17 2021, 11:05.

Sep 16 2021

Merge branch 'geom_test' of ssh://c4science.ch/source/espic2d into…
8c01c56ba7b7
·lebars on Sep 16 2021, 17:41.
Added computation of global effective momentum collision frequency
d17b48733925
·lebars on Sep 16 2021, 17:41.
corrected error with step and cstep
be7f6c73d5e2
·lebars on Sep 16 2021, 17:38.
corrected step to cstep
11ccac521c70
·lebars on Sep 16 2021, 10:33.
changed initial Zbounds calculation
472e8e4141e9
·lebars on Sep 16 2021, 10:31.
Added forgotten depend
44fb5c6784f3
·lebars on Sep 16 2021, 10:26.
Added capacity to recompute mpi domain decomposition during the run…
ebebe1827a6a
·lebars on Sep 16 2021, 10:24.

Sep 7 2021

removed quicksort temporarily because too slow
0cee2bdc5f34
·lebars on Sep 7 2021, 08:52.
Added particle sorting every it2d
c2c8c72ba19e
·lebars on Sep 7 2021, 08:40.
Merge branch 'geom_test' of ssh://c4science.ch/source/espic2d into…
990eaab682ce
·lebars on Sep 7 2021, 08:37.
Added external electric field calculation and storage
e004767bdf62
·lebars on Sep 7 2021, 08:37.
Corrected miscalculation of lost kinetic E when deleting a lost particle
189228bd63ac
·lebars on Sep 7 2021, 08:36.

Aug 27 2021

Merge branch 'geom_test' of ssh://c4science.ch/source/espic2d into…
c4d8ae582d8a
·lebars on Aug 27 2021, 11:42.
changed post-processing routines
f50c66aea0d8
·lebars on Aug 27 2021, 11:40.
Adapted post-processing routines
d1fdbf9bfe90
·lebars on Aug 27 2021, 11:38.

Aug 24 2021

Corrected scaling from sigmamom to sigma for elastic
42f4646d83df
·lebars on Aug 24 2021, 09:32.

Aug 23 2021

Added elastic momentum cross-section and ionisation cross-section for neon
52ebde48bb99
·lebars on Aug 23 2021, 08:37.
rescaled elastic cross section to adapt incoming momentum sigma refactored…
b2787b05478f
·lebars on Aug 23 2021, 08:35.

Aug 17 2021

deleted stop in case of lost particles on restart
3e866ce0c335
·lebars on Aug 17 2021, 14:29.
Corrected renormalisation for restart
012bae35b3aa
·lebars on Aug 17 2021, 14:11.

Aug 11 2021

Merge branch 'geom_test' of ssh://c4science.ch/source/espic2d into…
a18ee4b3024d
·lebars on Aug 11 2021, 13:39.
Added forgotten neutcol_mod necessary for simulating collisions
76b3b9ef3f4f
·lebars on Aug 11 2021, 13:39.
Merge branch 'geom_test' of ssh://c4science.ch/source/espic2d into geom_test
f4cfc20091af
·lebars on Aug 11 2021, 13:33.
Added intel version for helvetios
dbd5eb7c66d5
·lebars on Aug 11 2021, 13:31.
Merge branch 'geom_test' of ssh://c4science.ch/source/espic2d into…
e64fbc69ae4d
·lebars on Aug 11 2021, 09:49.
Separated gaussian and maxwellian distrib for velocity fitting
dd5453d97d74
·lebars on Aug 11 2021, 09:49.
Added elasticc and ionisation collisions Separated grid diagnostics and rhs…
1dd834c3f943
·lebars on Aug 11 2021, 09:41.

Jul 2 2021

Merge branch 'geom_test' of ssh://c4science.ch/source/espic2d into…
5d31aab5715b
·lebars on Jul 2 2021, 09:14.
Reduced the number of calculations in this file
5278b1faa94e
·lebars on Jul 2 2021, 09:10.
Corrected several bugs in the h5quantity when comparing indices with ':' Added…
337272d40c2a
·lebars on Jul 2 2021, 09:08.

May 31 2021

Added combination of cylinder and ellipse for upper boundary
6b14ed112f6a
·lebars on May 31 2021, 16:42.
Corrected .depend file for previous commit
6e7fa3a31f6f
·lebars on May 31 2021, 14:34.
Changed random number generator Added possibility to add test particles on…
e2022073cb8c
·lebars on May 31 2021, 14:32.

May 10 2021

Added nlFreezephi flag to stop actualisation of the electric field Corrected…
48301f3373db
·lebars on May 10 2021, 14:41.

May 5 2021

Merge branch 'geom_test' of ssh://c4science.ch/source/espic2d into…
3f7647c8fb6d
·lebars on May 5 2021, 10:24.
Deleted old unrelevant routines
80fe27e4b74f
·lebars on May 5 2021, 10:24.
Added flag for old definition of dt in espic2dhdf5 Added try catch due to error…
6563d43e056d
·lebars on May 5 2021, 10:23.
Added new routines in espic2dhdf5 to plot the potential well and density along…
0c27dba4ede1
·lebars on May 5 2021, 10:20.

May 3 2021

Corrected error in velocity for maxwell source particle creation for relativity
0afc1ede8a5f
·lebars on May 3 2021, 21:31.

Apr 23 2021

Updated several post-processing routines
cfeb71af8548
·lebars on Apr 23 2021, 09:47.

Apr 20 2021

Streamlined creation and deletion of particles corrected bug in celldiag output…
da84a907358b
·lebars on Apr 20 2021, 09:31.

Mar 30 2021

Added post processing routines for Diocotron stability eigenvalue solver…
6056f33f2b74
·lebars on Mar 30 2021, 10:52.

Mar 15 2021

Corrected restart
46b92af22c35
·lebars on Mar 15 2021, 19:35.
corrected maxwellsource for mpi parallelisation
70b1e08493bd
·lebars on Mar 15 2021, 19:33.
Changed several postprocessing routines removed bug in restart
9ceaf6f2492b
·lebars on Mar 15 2021, 14:17.

Mar 10 2021

Maxwell source can now inject in the whole surface Maxwellsource renamed to…
d3a5ffdd49c1
·lebars on Mar 10 2021, 17:57.

Mar 8 2021

Corrected writing of restart file corrected gathering of particles on host
9c3d1c41646d
·lebars on Mar 8 2021, 11:58.

Mar 7 2021

particle potential is now also sent during mpi communications
dcbe338b1632
·lebars on Mar 7 2021, 11:27.

Mar 4 2021

Adapted post process matlab routines to work with non mesh conforming geometry
6269c215b3b0
·lebars on Mar 4 2021, 13:46.
Added Diocotron stability study post process
bc9bda6135a0
·lebars on Mar 4 2021, 13:44.
Added scale factor for weights on restart
40347da6550b
·lebars on Mar 4 2021, 09:09.

Mar 3 2021

Added text output to track gained and lost particles
a22a3ee849fa
·lebars on Mar 3 2021, 09:54.

Mar 2 2021

Updated stepon forgoten form last comit
7a98199dccc1
·lebars on Mar 2 2021, 08:01.

Mar 1 2021

corrected sorting of losthole
a032d4ccb09d
·lebars on Mar 1 2021, 21:24.
Corrected bug that could delete random particles during mpi particle exchange…
5c5553e0afbf
·lebars on Mar 1 2021, 14:52.

Feb 12 2021

changed calculation of e_pot on particle deletion
380196ab8e8d
·lebars on Feb 12 2021, 10:27.

Feb 10 2021

fixed bug for resume
b8569882d9e4
·lebars on Feb 10 2021, 20:06.
Improved parallelisation speed with better simd use
541e36488bac
·lebars on Feb 10 2021, 17:22.

Feb 9 2021

Merge branch 'geom_test' of ssh://c4science.ch/source/espic2d into…
ed69100d9cf6
·lebars on Feb 9 2021, 14:28.
Improved parallelism and calculation of reducced mat
22b60c541a80
·lebars on Feb 9 2021, 14:27.

Feb 5 2021

Merge branch 'geom_test' of ssh://c4science.ch/source/espic2d into…
b5d0ddcd0692
·lebars on Feb 5 2021, 09:54.
Added flags to take care of new geometry type
b18e08af36dc
·lebars on Feb 5 2021, 09:54.
Imported totcharge ans displayphasspace from master
7ec56e3bf5b3
·lebars on Feb 5 2021, 09:52.
changed set lock to reduction in rhscon
ca7d11d84475
·lebars on Feb 5 2021, 08:54.

Jan 28 2021

Added bounsaries representation in rprofile and well corrected vpar and vperp…
19b6ae8ced28
·lebars on Jan 28 2021, 14:44.
Corrected reference energy reload on restart
bf709bb6fb42
·lebars on Jan 28 2021, 13:20.

Jan 27 2021

Corrected bug for restart all external particles are deleted before save…
7e9fdd76df9e
·lebars on Jan 27 2021, 20:42.

Jan 26 2021

Corrected calculation of external potential
ce7f2d55f11e
·lebars on Jan 26 2021, 11:56.

Jan 25 2021

Corrected calculation of reducced mat
d6667bc5cea5
·lebars on Jan 25 2021, 19:51.

Jan 21 2021

changed geomparams namelist for consistency
4da3f0ccaf42
·lebars on Jan 21 2021, 09:43.
now only root mpi process print geometry params
56fb3983c4db
·lebars on Jan 21 2021, 09:41.
updated .depend file
9b5fedb37c76
·lebars on Jan 21 2021, 09:09.
Added second spline variable to compute external field Particles electric…
9a54db9b4006
·lebars on Jan 21 2021, 08:11.
Added possibility to read files with non conforming boundary conditions Added…
5c6e2f6081c1
·lebars on Jan 21 2021, 08:07.

Dec 14 2020

Changed launch.json
d9fceb381a15
·lebars on Dec 14 2020, 10:04.
Parallelised reduced matrix construction
cbfe9ac626ed
·lebars on Dec 14 2020, 09:04.

Dec 11 2020

updated espic2dhdf5 to read geometry params
5bab09425a64
·lebars on Dec 11 2020, 08:15.

Dec 10 2020

changed web test function
c1b2415e94bc
·lebars on Dec 10 2020, 15:12.
changed matrices to use mumps
8470a8123988
·lebars on Dec 10 2020, 15:04.
Corrected calculation of eij and ctrs in geometry_mod
8e8fc067461b
·lebars on Dec 10 2020, 10:57.

Dec 9 2020

Changed calculation of eij for web splines
8465ef5d6677
·lebars on Dec 9 2020, 09:02.

Dec 4 2020

Updated web-spline method
188900b8d5c5
·lebars on Dec 4 2020, 13:29.

Dec 1 2020

Created geometry module to implement non conforming boundary conditions
d65c696ce919
·lebars on Dec 1 2020, 10:31.

Nov 16 2020

Added routine to read magnetic field from h5 file
5270dbcc11fe
·lebars on Nov 16 2020, 10:54.

Sep 24 2020

Changed matlab functions for rprofile corrected error in analyse_espicfields
80deb5809337
·lebars on Sep 24 2020, 10:54.
Modifiied some post-processing functions
23f3bc2640a5
·lebars on Sep 24 2020, 10:47.

Sep 11 2020

Changed some variable names and streamlined the functions to take care of some…
56437f43d648
·lebars on Sep 11 2020, 09:16.

Aug 26 2020

Modified matlab files to compute the parallel and perpendicular velocities in…
e9b9adb9943f
·lebars on Aug 26 2020, 08:33.

Aug 21 2020

Added descriptive comments to post process files Modified files to treat cell…
479d4b67b232
·lebars on Aug 21 2020, 09:32.

Aug 18 2020

Added initial celldiag that save the particles phase space at the given location
7a81ec0f73ee
·lebars on Aug 18 2020, 15:21.

Aug 13 2020

Added radialtype to the maxwellian source
26c75731921f
·lebars on Aug 13 2020, 22:05.

Aug 12 2020

Second typo
e5701b44c051
·lebars on Aug 12 2020, 12:46.

Historystable118e68d1a0d59a4d9ead886…

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History
stable118e68d1a0d59a4d9ead886…