Diffusion Genome Privacy - SHCS App (develop) History

genopri-shcs/project
developda652ed24928adfc931bb61…

Jul 5 2014

Merge branch 'webservice' into develop
da652ed24928
·Franck Youssef on Jul 5 2014, 18:26.
Merge branch 'webservice_xml' of https://git.epfl.ch/repo/genomeprivacy into…
e086b35b2dff
·Franck Youssef on Jul 5 2014, 16:52.
XML: various fixes not only to XML.
840580a5238a
·Franck Youssef on Jul 5 2014, 16:51.
Merge branch 'webservice_xml' of https://git.epfl.ch/repo/genomeprivacy into…
b2bd854efea0
·Franck Youssef on Jul 5 2014, 16:49.
XML: fixed parsing and request handling
a1fc1bee1419
·Franck Youssef on Jul 5 2014, 16:49.

Jul 4 2014

progress in missing material handling.
09262c2d586f
·Franck Youssef on Jul 4 2014, 16:15.
MINOR: added Oracle JDBC adapter library.
ef00847bd047
·Franck Youssef on Jul 4 2014, 16:14.

Jul 3 2014

Merge branch 'webservice_xml' of https://git.epfl.ch/repo/genomeprivacy into…
6ba7380658fa
·Franck Youssef on Jul 3 2014, 01:25.
fixing XML formatting and parsing. Various bug fixes.
438db9d049d4
·Franck Youssef on Jul 3 2014, 01:25.
debugging XML formatting and parsing
1dd821fc80ac
·Franck Youssef on Jul 3 2014, 01:24.

Jul 2 2014

Merge branch 'webservice_xml' of https://git.epfl.ch/repo/genomeprivacy into…
19e88dbd7dbb
·Franck Youssef on Jul 2 2014, 15:58.

Jun 27 2014

MINOR: progress in MINOR: started integrating new messages in client and server
678a3f20905e
·Franck Youssef on Jun 27 2014, 15:18.
MINOR: progress in formatting of query and replies
ba32552da914
·Franck Youssef on Jun 27 2014, 11:17.

Jun 26 2014

XML: generation and parsing of DECRYPT requests and replies. To be tested.
0b3a9801f2eb
·Franck Youssef on Jun 26 2014, 01:57.
MINOR: added XML parsing libraries
47de4fd57ff8
·Franck Youssef on Jun 26 2014, 01:56.
XML: removed unnecessary classes
709ec6992205
·Franck Youssef on Jun 26 2014, 01:55.

Jun 25 2014

WS: debugging calls
93fb20831904
·Franck Youssef on Jun 25 2014, 14:45.

Jun 24 2014

DEBUG: trying alternative to JSON-IO
003ccb86863b
·Franck Youssef on Jun 24 2014, 10:40.
DEBUG: further debugging for second WS call.
2f5ea53391db
·Franck Youssef on Jun 24 2014, 10:05.
MINOR: fixed gitignore
7c7919ca93b7
·Franck Youssef on Jun 24 2014, 09:44.
MINOR: fixed gitignore
1c372aeffc2f
·Franck Youssef on Jun 24 2014, 00:36.
MINOR: fixed gitignore
aa5944aa21ae
·Franck Youssef on Jun 24 2014, 00:33.

Jun 17 2014

MAJOR: commited report.
8b053926f535
·Franck Youssef on Jun 17 2014, 18:15.
MINOR: sample code for Raisaro
fc0616a16875
·Franck Youssef on Jun 17 2014, 17:21.
MAJOR: pre final release of report. Added extensive EC testing. Updated plots.
5142373eb440
·Franck Youssef on Jun 17 2014, 02:52.

Jun 15 2014

MAJOR: compression for encoded EC points.
1c5cffaf2c15
·Franck Youssef on Jun 15 2014, 23:12.

Jun 10 2014

ECCEG: request Jean Louis, are numbers correctly wrapped if they exceed k=n or…
25051acf9a57
·Franck Youssef on Jun 10 2014, 17:12.

Jun 5 2014

Adapted crypto modules for old ec curve tests.
33564065435c
·Franck Youssef on Jun 5 2014, 02:50.

Jun 3 2014

REPORT: added DTDs to report.
08901fb40eb8
·Franck Youssef on Jun 3 2014, 14:19.

May 23 2014

Default constructor and setters.
54e7d3fae198
·Franck Youssef on May 23 2014, 16:23.
Minor refactoring
1b1e859b6cde
·Franck Youssef on May 23 2014, 14:42.
completed first impl. of new service structure.
50079dc163e1
·Franck Youssef on May 23 2014, 14:35.

May 22 2014

Further in request handling refactoring.
65cb20f5b15e
·Franck Youssef on May 22 2014, 18:31.

May 16 2014

updated sample SOAP messages and DTDs accordingly.
e5eab362d5cf
·Franck Youssef on May 16 2014, 01:01.

May 15 2014

progress in SOAP
e8d16bfab6d5
·Franck Youssef on May 15 2014, 23:49.
serialization classes
e7d71ff62d46
·Franck Youssef on May 15 2014, 01:55.
refactoring test requests to group tests together. ongoing, still bugs.
1cb5762ea459
·Franck Youssef on May 15 2014, 01:55.
started implementing soap support.
08804c712400
·Franck Youssef on May 15 2014, 01:55.
added sample soap code
184494bf8142
·Franck Youssef on May 15 2014, 01:49.

May 12 2014

Added Apache Commons Codec library for base64 utilities.
ca8ee33c98ba
·Franck Youssef on May 12 2014, 14:39.

May 9 2014

ignore so far the map reduce part
8c1766d2c116
·Franck Youssef on May 9 2014, 11:04.

May 7 2014

Enhancing debugging.
552f2dc1f94e
·Franck Youssef on May 7 2014, 23:45.
added genotype updater, manually used.
f0056f22d346
·Franck Youssef on May 7 2014, 18:34.
Advanced logging infos (fine and finer).
9463e3e1da3b
·Franck Youssef on May 7 2014, 17:57.
Removed deprecated parameter and fixed DB query for marker.
2614f4ef784e
·tag: v0.2.0
·Franck Youssef on May 7 2014, 09:45.
Fixed typo in class name RequestSNPandHLA instead of RequestSNPandCF.
50d1e48a93f5
·Franck Youssef on May 7 2014, 09:33.
Added loggin infos
8c30c3ab12fb
·Franck Youssef on May 7 2014, 07:27.

May 6 2014

FIX: bug in interpolation, fixed. Hell yeah!!!
a4c8fb88fe81
·Franck Youssef on May 6 2014, 22:10.
debugging crypto libraries.
ac2c3e77bd17
·Franck Youssef on May 6 2014, 21:09.
Continue troubleshoting ECCEG decryption. Not working yet.
7eb56173bd7d
·Franck Youssef on May 6 2014, 19:49.
fixed db access for encrypted HLAs.
a57334b011f9
·Franck Youssef on May 6 2014, 15:38.
test serialization object db
c8ca013eed64
·Franck Youssef on May 6 2014, 15:25.
start writing some simple client test code for SNPs.
cb04453fc963
·Franck Youssef on May 6 2014, 00:25.
package refactoring.
569bc23eeba8
·Franck Youssef on May 6 2014, 00:21.
completed HLA task. To test. To fix decryption issues. Check with simple…
450c4012b533
·Franck Youssef on May 6 2014, 00:11.

May 5 2014

put precision and shiftvalue into properties files.
739c8b075950
·Franck Youssef on May 5 2014, 21:05.
updated domain range and lookup table.
5d469a05dc18
·Franck Youssef on May 5 2014, 01:09.

May 4 2014

Merge branch 'index_encrypt' of https://git.epfl.ch/repo/genomeprivacy into…
15a6cc3ce7e1
·Franck Youssef on May 4 2014, 21:28.
FragmentPartialEncoded constructor from raw types.
bd88965f998d
·Franck Youssef on May 4 2014, 21:28.
fix in elgamal not taking secret share but private key. Fix in secret share…
5e3072350def
·Franck Youssef on May 4 2014, 21:27.
encoded partial fragment.
8bf78b5c7c49
·Franck Youssef on May 4 2014, 21:18.
send encoded instead of plain.
b8f0fb70e9ad
·Franck Youssef on May 4 2014, 20:56.
Changed JSON IO. Server Worker handles only one request per instance and quits.
3fe5097d6c65
·Franck Youssef on May 4 2014, 20:35.
try quickfix JSON-IO connection handler.
91445b36c477
·Franck Youssef on May 4 2014, 17:57.
update json-io libarary from 2.2.31 to 2.6.0.
2c4621282997
·Franck Youssef on May 4 2014, 15:33.
try to use Serializable only and see if it does the job without Externalize
df5ac4a7b787
·Franck Youssef on May 4 2014, 14:36.
Need to serialize partial secret objects. TODO.
4388876b32d9
·Franck Youssef on May 4 2014, 01:53.
added hashcode for MarkerEncrypted.
98dbcf1eb914
·Franck Youssef on May 4 2014, 01:41.
toString to marker
fc4b86ff0442
·Franck Youssef on May 4 2014, 01:28.
Reverse table generated once and loaded from disk later.
219b0714b2fe
·Franck Youssef on May 4 2014, 01:22.

May 3 2014

removed old enc_gen2_* entries.
f9f8222082aa
·Franck Youssef on May 3 2014, 19:07.
Fixed various DB issues and config problems for client.
980946c95aa7
·Franck Youssef on May 3 2014, 19:02.
adding curve to config properties
cd54a152b884
·Franck Youssef on May 3 2014, 12:45.
classpath cleanups, advanced debug info in config. cleaned up configurations…
4ddabf7a50f3
·Franck Youssef on May 3 2014, 12:34.
cleanup in worker
a4f12f2fcd2b
·Franck Youssef on May 3 2014, 01:59.
Finished compute test. Need to finish moving HLA part, not sure what the output…
40c8b6bd2745
·Franck Youssef on May 3 2014, 01:59.
Worker seems to be done.
5d07d6f6cff3
·Franck Youssef on May 3 2014, 01:59.
Partially moved computeTest. moved HLA requests. Further changes needed.
c1ad95543b8c
·Franck Youssef on May 3 2014, 01:59.
moving compute test from server side to client side.
d0ebb0e79d56
·Franck Youssef on May 3 2014, 01:59.
Increased domain range to 100'000
9190d5b2c446
·Franck Youssef on May 3 2014, 01:59.
part no longer used.
ca1a09e6d695
·Franck Youssef on May 3 2014, 01:59.
Many changes in MedUnit: - modularized the way tests are performed, - improved…
bde6d8ef0f12
·Franck Youssef on May 3 2014, 01:59.
Continued migration towards ECCEG. CI seems work properly. Need check for CF…
37a1a9d31149
·Franck Youssef on May 3 2014, 01:59.
Finished modifying readers for ECCEG. Need to test now.
c8b270a20e4a
·Franck Youssef on May 3 2014, 01:59.
added extended key support for ecceg. Refactoring. Rewriting readers for…
bc9b923eb956
·Franck Youssef on May 3 2014, 01:59.
Various formatting and cleanup. Labeling fields where change needed for testing…
2835e8356b46
·Franck Youssef on May 3 2014, 01:58.
cleanup sysout debug infos
0be633b68ebb
·Franck Youssef on May 3 2014, 01:58.

Apr 24 2014

FIX: creates the pdf output dir at client if not existing.
7056619e7dea
·Franck Youssef on Apr 24 2014, 17:51.

Apr 18 2014

port change and bug fix
7becc6d38713
·Franck Youssef on Apr 18 2014, 10:41.

Apr 17 2014

Further refactoring
5e36da9c1a73
·Franck Youssef on Apr 17 2014, 23:04.

Apr 16 2014

git ignore
8026f51251b1
·Franck Youssef on Apr 16 2014, 14:50.
Refactor and remove hard coded links/paths.
a46d2cf9b756
·Franck Youssef on Apr 16 2014, 14:37.

Apr 13 2014

Common code moved to PPPCommons. Cleaned PPPClient up. Added properties file to…
5595a8d46022
·Franck Youssef on Apr 13 2014, 16:19.

Apr 9 2014

Added libraries and ECCEG implementation into server code.
a849cce6c01a
·Franck Youssef on Apr 9 2014, 14:40.
MAJOR: cleanup old code.
09e29032e3b1
·Franck Youssef on Apr 9 2014, 14:22.

Apr 7 2014

MAJOR: added refactored project from Raisaro.
750375b50742
·Franck Youssef on Apr 7 2014, 08:59.

Apr 2 2014

MINOR: working threshold crypto. Need to write proper classes and structure.
900c8a86c920
·Franck Youssef on Apr 2 2014, 00:50.

Apr 1 2014

MINOR: stop tracking
adecf6841c0f
·Franck Youssef on Apr 1 2014, 22:29.
MINOR: devel ECCEG-TC
3cdbdc846997
·Franck Youssef on Apr 1 2014, 22:05.

Mar 31 2014

MINOR: stopped tracking
50a289ff7239
·Franck Youssef on Mar 31 2014, 20:14.

genopri-shcs/projectdevelopda652ed24928adfc931bb61…

Jul 5 2014

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genopri-shcs/project
developda652ed24928adfc931bb61…