Diffusion GYACOMO (OBSOLETE: LATEST VERSION ON gitlab.epfl.ch) (Miller) History

History
Millera98b465e36f780a2e2c633c…

Apr 25 2022

matlab scripts reorganization
a98b465e36f7
·Ahoffmann on Apr 25 2022, 13:54.

Apr 8 2022

xphij arrays and fort.90 + marconi batch script
7ee703feb0b9
·branch: 3D_parallel
·Ahoffmann on Apr 8 2022, 13:51.
z parallel and collision + specie dependency on xphi terms
229862936351
·Ahoffmann on Apr 8 2022, 13:44.
Working 3D parallel version
c636d794bde1
·Ahoffmann on Apr 8 2022, 13:16.

Apr 5 2022

first commit of z parallel version, still buggy
5e48668823b5
·Ahoffmann on Apr 5 2022, 17:27.

Mar 15 2022

adiab e corrections
aa401ea19b33
·Ahoffmann on Mar 15 2022, 08:27.
srcinfos
a75af56efdb0
·Ahoffmann on Mar 15 2022, 08:27.
back to 4th HD
6939fa973bee
·Ahoffmann on Mar 15 2022, 08:27.
corrected init for adiab e
1af14dacfaa3
·Ahoffmann on Mar 15 2022, 08:26.
added Lenhard Bernstein operator
d13137a18668
·Ahoffmann on Mar 15 2022, 08:26.
scripts updates
f225dc1f7a28
·Ahoffmann on Mar 15 2022, 08:25.

Feb 25 2022

Drift Kinetic Dougherty added
65a774628574
·Ahoffmann on Feb 25 2022, 15:00.

Feb 24 2022

save
3b26011b21fe
·Ahoffmann on Feb 24 2022, 10:04.

Jan 24 2022

update 2022
85911ff7c9f2
·Ahoffmann on Jan 24 2022, 17:43.

Nov 29 2021

bug fix
6d12f9ca8b5b
·Ahoffmann on Nov 29 2021, 11:04.

Nov 23 2021

reducing output
32cb6dfa763e
·Ahoffmann on Nov 23 2021, 17:49.
semilinear + act on modes options, HeLaZ 3.03
873a9e76e1d9
·Ahoffmann on Nov 23 2021, 17:34.
scripts update
c259b712c886
·Ahoffmann on Nov 23 2021, 17:34.
added a collision parameter set and correction of cosolver op
ce192c0014d9
·Ahoffmann on Nov 23 2021, 17:33.

Nov 11 2021

script to run Cyclone test case for GENE benchmark
2df4eb7c55a3
·Ahoffmann on Nov 11 2021, 10:40.
script updates
2f56f051516d
·Ahoffmann on Nov 11 2021, 10:40.
NONLIN=0.5 run only NZ Z non linear interactions. Z modes are stored and can be…
8031ad20e0b7
·Ahoffmann on Nov 11 2021, 10:40.
added a debug compilation option in the makefile
3237b605df0c
·Ahoffmann on Nov 11 2021, 10:39.

Nov 10 2021

update scripts
0d685e3b68a2
·Ahoffmann on Nov 10 2021, 15:03.

Nov 8 2021

script reogarnisation
8df05cb1f787
·Ahoffmann on Nov 8 2021, 13:43.
Executable is named helaz3 per default
95b37e181ac5
·Ahoffmann on Nov 8 2021, 11:53.
update scripts
f4ce4a1ac163
·Ahoffmann on Nov 8 2021, 11:37.

Nov 2 2021

HeLaZ 3.5
149e2a2909ca
·Ahoffmann on Nov 2 2021, 09:17.
scripts update
40660cf3cbf6
·Ahoffmann on Nov 2 2021, 09:16.
Added staggered grid option to avoid checkerboard effect (Paruta 2018)
6403a43427bd
·Ahoffmann on Nov 2 2021, 09:16.

Nov 1 2021

update roadmap
662e3f7a4c12
·Ahoffmann on Nov 1 2021, 08:50.
HeLaZ 3.4 and next update incoming
0fa429657cdd
·Ahoffmann on Nov 1 2021, 08:48.
Added adiabatic electrons and simplified Poisson eq
a26f57e84921
·Ahoffmann on Nov 1 2021, 08:46.
Wrote two benchmarks scripts, data for benchmark should be uploaded
76b3fe8554b2
·Ahoffmann on Nov 1 2021, 08:43.

Oct 27 2021

HeLaZ 3.3! Benchmarked for periodic shearless fluxtube with molix
d29af00aec97
·Ahoffmann on Oct 27 2021, 15:35.
simplification and verification
6bcce5b8c289
·Ahoffmann on Oct 27 2021, 15:33.
adding some precomputed constants
17a3be285313
·Ahoffmann on Oct 27 2021, 15:33.
useless
3337602c113b
·Ahoffmann on Oct 27 2021, 15:32.
idea of a class for species
762d817ed619
·Ahoffmann on Oct 27 2021, 15:32.
twothird const
1f09a38aa9d6
·Ahoffmann on Oct 27 2021, 15:32.
simplification by using more physics related variable names
3da24f61adc2
·Ahoffmann on Oct 27 2021, 15:32.
simplification of kernel computation and benchmark of parallel terms
388bad0ace2b
·Ahoffmann on Oct 27 2021, 15:31.
Added non adiabatic moments fields to simplify writing
0bc911b95ae8
·Ahoffmann on Oct 27 2021, 15:31.
Added salphaB flux tube geometry
4b0f645cf842
·Ahoffmann on Oct 27 2021, 15:30.
Update scripts
286b37a44f5e
·Ahoffmann on Oct 27 2021, 15:29.

Oct 22 2021

Update scripts
59f9a2dc5254
·Ahoffmann on Oct 22 2021, 14:38.

Oct 19 2021

typo
f7c491b33632
·• Antoinehoff on Oct 19 2021, 14:23.
comment s-alpha geometry (not ready)
8dcc64def0d6
·• Antoinehoff on Oct 19 2021, 14:19.
Merge branch 'master' of ssh://c4science.ch/source/HeLaZ
f1f706136822
·• Antoinehoff on Oct 19 2021, 14:01.
Correction of 3D geometry
757a1a4ae5b6
·• Antoinehoff on Oct 19 2021, 14:01.
partial update to refresh home computer files
b62159cfcb29
·Ahoffmann on Oct 19 2021, 14:00.

Oct 11 2021

typo!
bba2d18bb4a7
·Ahoffmann on Oct 11 2021, 13:42.

Oct 8 2021

typoooo
eea0a50795ef
·Ahoffmann on Oct 8 2021, 17:04.
Scripts now read heat fluxes and name input file as fort_XX.90
b8fae4bb2b6a
·Ahoffmann on Oct 8 2021, 14:05.
removing unused parameters
0865bd5a1457
·Ahoffmann on Oct 8 2021, 14:04.
If no parallel dyn, (2D perp sim), only even hermite are simulated
2572403b46c2
·Ahoffmann on Oct 8 2021, 14:04.
GF closure implemented
ffd78d087fdd
·Ahoffmann on Oct 8 2021, 14:03.

Oct 4 2021

scripts and typos
d118c2b79c10
·Ahoffmann on Oct 4 2021, 15:47.
inputfile+jobid e.g. fort_00.90. the id is set as first or third arg
90665b462b84
·Ahoffmann on Oct 4 2021, 14:35.
removed unused variables and put heat flux computation option
b266f63ff08e
·Ahoffmann on Oct 4 2021, 13:35.
removed RESTART variable. Restart is set by job2load >= 0
72a03433347e
·Ahoffmann on Oct 4 2021, 11:24.
scripts update
6fa34bf7805f
·Ahoffmann on Oct 4 2021, 09:36.
add heat flux computation if needed
4a33e4c7ebb2
·Ahoffmann on Oct 4 2021, 09:36.
add full coulomb operator and completion with dougherty
a1ac1cd57a42
·Ahoffmann on Oct 4 2021, 09:36.
writing simplification
a55642789484
·Ahoffmann on Oct 4 2021, 09:35.

Sep 13 2021

scripts updates
01dcbfc35ab5
·Ahoffmann on Sep 13 2021, 11:21.

Sep 9 2021

post processing scripts update
8787f7eab857
·Ahoffmann on Sep 9 2021, 15:20.
makefile update
f9b79292554d
·Ahoffmann on Sep 9 2021, 15:20.
Lenard Bernstein CO
ab4894e93eab
·Ahoffmann on Sep 9 2021, 15:19.
One can now force Zonal or NZ modes to 0 each timestep
f74443ee0320
·Ahoffmann on Sep 9 2021, 15:19.
correction for linear run
fae76264d9a8
·Ahoffmann on Sep 9 2021, 15:18.
added Lenard-Bernstein CO
1734272ef6d5
·Ahoffmann on Sep 9 2021, 15:18.

Aug 30 2021

scripts update
6ada1c908c4f
·Ahoffmann on Aug 30 2021, 15:52.
to plot the evolution of parameters during a run
8708f060e3b1
·Ahoffmann on Aug 30 2021, 15:52.
update 3.2
337c8353d2ea
·Ahoffmann on Aug 30 2021, 15:51.
Now a file named "stop" in the sim dir stops to the current simulation
b05d4f91aa69
·Ahoffmann on Aug 30 2021, 15:49.

Aug 16 2021

code cleaning
a6ace5a733a9
·Ahoffmann on Aug 16 2021, 10:33.

Aug 4 2021

FCGK is available now
207d8e18ddbe
·Ahoffmann on Aug 4 2021, 14:02.
Now working for 1D linear analysis
a58f14c587be
·Ahoffmann on Aug 4 2021, 14:01.
scripts update
ab81f3e047fa
·Ahoffmann on Aug 4 2021, 09:54.

Aug 3 2021

sign error
03d92523cdb5
·Ahoffmann on Aug 3 2021, 16:55.
sign error
283e9b4a2fea
·Ahoffmann on Aug 3 2021, 16:53.
sign error
3cb1c3404f59
·Ahoffmann on Aug 3 2021, 16:43.
correction of axis equivalences
0d9918730e27
·Ahoffmann on Aug 3 2021, 16:28.
typo
10eb8738cfd3
·Ahoffmann on Aug 3 2021, 16:28.
added shear and inverse aspect ratio as input parameters
27afc84e7653
·Ahoffmann on Aug 3 2021, 14:26.
cosmetic
3511a99ade28
·Ahoffmann on Aug 3 2021, 14:16.
s-alpha geometry updated
39c6491679da
·Ahoffmann on Aug 3 2021, 14:16.
shear and inverse aspect ratio
30353427ff31
·Ahoffmann on Aug 3 2021, 14:16.
z-dep kernel and mirror force terms
cec66ce8cfc7
·Ahoffmann on Aug 3 2021, 14:15.
Kernel are now z-dependant
358d36843be4
·Ahoffmann on Aug 3 2021, 14:15.
change simdir name
fba92bd9b4a0
·Ahoffmann on Aug 3 2021, 14:13.

Aug 2 2021

scripts update
dda7672676b3
·Ahoffmann on Aug 2 2021, 15:51.
update for new modules (numerics and geometry)
1baa8b0149a5
·Ahoffmann on Aug 2 2021, 15:51.
module to precompute kernels, lin coeff etc.
8f7a499b4d51
·Ahoffmann on Aug 2 2021, 15:51.
Flux tube geometry routines inspired from molix (BJF)
c560631e205d
·Ahoffmann on Aug 2 2021, 15:51.
results on HD analysis
47820643cc90
·Ahoffmann on Aug 2 2021, 11:02.
update for HeLaZ3
0fe55255654d
·Ahoffmann on Aug 2 2021, 11:01.
Makefile HeLaZ 3
63aba719b2f9
·Ahoffmann on Aug 2 2021, 10:42.
Reorganization of the matlab scripts for more readability
7be2bab52db0
·Ahoffmann on Aug 2 2021, 10:34.

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History
Millera98b465e36f780a2e2c633c…