Diffusion GYACOMO (OBSOLETE: LATEST VERSION ON gitlab.epfl.ch) (master) History

History
master9a0050373a7a0f201b2dfeb…

Oct 27 2020

minor changes
9a0050373a7a
·Ahoffmann on Oct 27 2020, 11:42.
Update README
980ddcab8fb8
·Ahoffmann on Oct 27 2020, 10:58.
Update roadmap
4df81855d76e
·Ahoffmann on Oct 27 2020, 10:53.
Project of adaptative time step scheme
3d6853a0ffd8
·Ahoffmann on Oct 27 2020, 10:49.
kr=0 symmetric initialization and enforcement at each time step
222b08e4a12e
·Ahoffmann on Oct 27 2020, 10:49.
minor changes
b1b0b4c27f38
·Ahoffmann on Oct 27 2020, 10:48.
Scripts to study behavior of computational cost w.r.t. parameters
ad4e64eaf6f0
·Ahoffmann on Oct 27 2020, 10:48.
Separation between loading results and post processing
4edaa07d6309
·Ahoffmann on Oct 27 2020, 10:47.
Separation of parameters input scripts and fort.90 writing in matlab
ccb7ee45a4c2
·Ahoffmann on Oct 27 2020, 10:47.

Oct 22 2020

Included a setup with sinusoidal background ES pot and density for KH
56b9dafb082c
·Ahoffmann on Oct 22 2020, 14:15.

Oct 5 2020

Added z shift to the Gaussian initialization
4817fe56aaaa
·Ahoffmann on Oct 5 2020, 15:21.
sc
efffb3dc0f40
·Ahoffmann on Oct 5 2020, 15:19.
sc
41ec3009e51d
·Ahoffmann on Oct 5 2020, 14:52.
diagnose each 5 time unit
c0fb80f30a15
·Ahoffmann on Oct 5 2020, 14:52.
increased Gaussian init size
19b55ed3ada6
·Ahoffmann on Oct 5 2020, 14:52.
Forgot Antialiasing...
ff4a338a98c5
·Ahoffmann on Oct 5 2020, 14:52.
HeLaZ can now run in 1D over kz for growth rate study as MOLI
5b5157b79b2f
·Ahoffmann on Oct 5 2020, 14:52.
put kz > 0 instead of kr > 0
06b78cf31a87
·Ahoffmann on Oct 5 2020, 10:20.
sc
01095795c37f
·Ahoffmann on Oct 5 2020, 10:02.
non-linear term written more explicitely
46d880bc2a65
·Ahoffmann on Oct 5 2020, 09:59.
slight changes
815be2d82380
·Ahoffmann on Oct 5 2020, 09:59.
added kpar terms and option
30bba2373d79
·Ahoffmann on Oct 5 2020, 09:59.

Sep 30 2020

update schedule
269757e23aad
·Ahoffmann on Sep 30 2020, 17:35.
Added non linear term and convolution through DFT with FFTW3
c039548751be
·Ahoffmann on Sep 30 2020, 17:31.
Origin singularity cancelation with ikr_0 variables
af40c93ec415
·Ahoffmann on Sep 30 2020, 09:36.
Naming and structural change
adb59059244c
·Ahoffmann on Sep 30 2020, 09:28.
Backup before putting non linear solver
e04f06e1e9b9
·Ahoffmann on Sep 30 2020, 08:28.
remove FM library
dfdd7c99a4cc
·Ahoffmann on Sep 30 2020, 08:27.
Merge branch 'master' of ssh://c4science.ch/source/HeLaZ
b39c5a9e65ef
·Ahoffmann on Sep 30 2020, 08:27.
update gitignore
c81478667834
·Ahoffmann on Sep 30 2020, 08:24.
update gitignore
b9ceb5dc6134
·Ahoffmann on Sep 30 2020, 08:24.

Jul 10 2020

refresh
1351911bf756
·Ahoffmann on Jul 10 2020, 09:19.
output before checking the end of the simulation, not after
2b60791c900a
·Ahoffmann on Jul 10 2020, 09:19.
comparison between MOLI and HeLaZ on a 2D k grid
9ff600a1cabd
·Ahoffmann on Jul 10 2020, 09:18.
added kr parameter for MOLI
a67434b804e9
·Ahoffmann on Jul 10 2020, 09:18.
aim for comparison between non linear HeLaZ method and a matlab method
0eaffa972659
·Ahoffmann on Jul 10 2020, 09:17.
evolve moments on a 2D k grid
513bd7bb76e0
·Ahoffmann on Jul 10 2020, 09:17.
routine for gif creation
8736458d5239
·Ahoffmann on Jul 10 2020, 09:16.
routines for the non linear term
3a65bf26b154
·Ahoffmann on Jul 10 2020, 09:16.

Jul 8 2020

update version 0.6 and roadmap
e02e0dade109
·Ahoffmann on Jul 8 2020, 10:13.
refresh
a4cfb827a852
·Ahoffmann on Jul 8 2020, 10:07.
comments
3cf05faea4a7
·Ahoffmann on Jul 8 2020, 10:06.
fix FC matrix allocation
f4789992022e
·Ahoffmann on Jul 8 2020, 10:05.
back to poke initalization
24ace58ee294
·Ahoffmann on Jul 8 2020, 10:05.
cleaned unused variables
71e00e53ef67
·Ahoffmann on Jul 8 2020, 10:04.
set linfitsolver off
8f1d3b4102c8
·Ahoffmann on Jul 8 2020, 10:02.

Jul 7 2020

Cleaned and refreshed
ef30a9806ed8
·Ahoffmann on Jul 7 2020, 10:12.
small changes in IF statements to spare computation
3391be78bf1f
·Ahoffmann on Jul 7 2020, 10:11.
Fixed the delta k computation
cec45a8d7a95
·Ahoffmann on Jul 7 2020, 10:11.
Added title generation
2004d5b74cee
·Ahoffmann on Jul 7 2020, 10:10.
short version of LinearFit.m from MOLI which includes only ARM
2522b474bc94
·Ahoffmann on Jul 7 2020, 10:10.
Setting the linear fit solver to time evolution for kperp scan benchmark
ba01b590f3ba
·Ahoffmann on Jul 7 2020, 10:09.

Jul 3 2020

split into different tests
eefce5fe0656
·Ahoffmann on Jul 3 2020, 18:27.
double precision correction
55ed9a870779
·Ahoffmann on Jul 3 2020, 18:26.
test that computes phi with HeLaZ moments and MATLAB poisson eq.
bbb295cb8124
·Ahoffmann on Jul 3 2020, 18:26.
correction to end at tmax and not tmax+dt
fd7835caf85f
·Ahoffmann on Jul 3 2020, 18:25.
added arrays for coulomb collision operator
8383e5bed60f
·Ahoffmann on Jul 3 2020, 18:25.
minor changes
86b0764f6142
·Ahoffmann on Jul 3 2020, 18:24.
tests for kperp scan
43291f7e97b1
·Ahoffmann on Jul 3 2020, 18:23.
Full coulomb COSOlver files can be read now
f994633ea802
·Ahoffmann on Jul 3 2020, 18:23.

Jun 26 2020

CO options added
30b6f265adce
·Ahoffmann on Jun 26 2020, 17:15.
renamed benchmark.m
c6b225a34e7c
·Ahoffmann on Jun 26 2020, 17:14.
Typos and presentation
f94fe3883bc1
·Ahoffmann on Jun 26 2020, 17:13.
Start to implement options for collision operator and COSOlver loader
9e2c5064d9b9
·Ahoffmann on Jun 26 2020, 17:13.
Small ajustement in names generations and comments
0c48b14e538f
·Ahoffmann on Jun 26 2020, 17:09.
Script to compare simple simulations with MOLI
292701d03073
·Ahoffmann on Jun 26 2020, 17:08.
update roadmap
9a4af45590a6
·Ahoffmann on Jun 26 2020, 17:07.

Jun 24 2020

slight fixes
60c4b5a580da
·Ahoffmann on Jun 24 2020, 17:25.
Dougherty collision operator
4516e5c72b43
·Ahoffmann on Jun 24 2020, 17:25.
Launches MOLI in a neighbour directory with parameters set by HeLaZ
c3ef9af22065
·Ahoffmann on Jun 24 2020, 16:47.
to spare place in scripts
2d23ed16056f
·Ahoffmann on Jun 24 2020, 16:47.
script to compare linear results with MOLI (RK4 needed in MOLI)
582679890267
·Ahoffmann on Jun 24 2020, 16:46.
script to analize growth rate in the linear case in k_z only
06a7431fc544
·Ahoffmann on Jun 24 2020, 16:46.
routines for particular plots
8f6112d3ff6b
·Ahoffmann on Jun 24 2020, 16:44.

Jun 22 2020

cleaning
994de183bda9
·Ahoffmann on Jun 22 2020, 17:50.
automatized
8e28c50def6a
·Ahoffmann on Jun 22 2020, 17:49.
update gitignore
bdefa02e7ab2
·Ahoffmann on Jun 22 2020, 17:48.
Matlab launcher to set parameters input, launch bin, launch postprocessing in…
8bfb52795e9a
·Ahoffmann on Jun 22 2020, 17:47.
update roadmap
bce7794ad8ce
·Ahoffmann on Jun 22 2020, 17:45.
matlab scripts for post processing
9530ffa47e82
·Ahoffmann on Jun 22 2020, 17:45.
update roadmap
5a5dc3cdc866
·Ahoffmann on Jun 22 2020, 14:56.
multiple typos correction
c7b37e0ce355
·Ahoffmann on Jun 22 2020, 14:52.
typo
2246519cf785
·Ahoffmann on Jun 22 2020, 14:51.
Added option to write Ni00 moment
3e9a416b15c5
·Ahoffmann on Jun 22 2020, 14:51.
Poke initialization (Ni00(t0) != 0 only) to imitate MOLI
6b60bf9d6697
·Ahoffmann on Jun 22 2020, 14:48.
write first ion moment Ni00 as 2D output
32cebacf8406
·Ahoffmann on Jun 22 2020, 14:47.
write first ion moment Ni00 as 2D output
99827b3bc2d4
·Ahoffmann on Jun 22 2020, 14:46.

Jun 18 2020

change for 1d [Nepj Napj] array to 2D Nepj and 2D Nipj arrays
815393243914
·Ahoffmann on Jun 18 2020, 11:46.

Jun 16 2020

test script
300bdfae5f90
·Ahoffmann on Jun 16 2020, 10:13.
minor change
2c8206da23f8
·Ahoffmann on Jun 16 2020, 10:10.
added imaginary unit variable imagu
219ea0f9714a
·Ahoffmann on Jun 16 2020, 10:10.
adaptation for new bare, bari functions
d357eac612bc
·Ahoffmann on Jun 16 2020, 10:09.
wrote collisionless moments hierarchy, linear, kz
9636e3c5fda1
·Ahoffmann on Jun 16 2020, 10:08.
add functions bare, bari, rabe, rabi to handle p,j to p*j indices
c073039d3fd5
·Ahoffmann on Jun 16 2020, 10:07.
Output the initial state
5b8351e4af5a
·Ahoffmann on Jun 16 2020, 10:04.
light presentation changes
73c51dedb1f1
·Ahoffmann on Jun 16 2020, 10:03.

Jun 12 2020

put a short description and a roadmap draft
6dab55ce53b9
·Ahoffmann on Jun 12 2020, 17:34.
the fields have been adapted to Hermite-Laguerre basis and kr,kz fourier space…
47b2d17e0d2a
·Ahoffmann on Jun 12 2020, 17:20.
implementation of the linear fourier poisson equation in two dimensions and p,j…
aae49312a524
·Ahoffmann on Jun 12 2020, 17:19.

Jun 11 2020

first push
9a072e2a6205
·Ahoffmann on Jun 11 2020, 11:09.

Historymaster9a0050373a7a0f201b2dfeb…

Oct 27 2020

Oct 22 2020

Oct 5 2020

Sep 30 2020

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Jul 8 2020

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Jun 12 2020

Jun 11 2020

History
master9a0050373a7a0f201b2dfeb…