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Diffusion lammps (efficient_neuronet) Graph

lammps/lib
efficient_neuronet

History Graph

CommitAuthorDetailsCommitted
f0263bf14ccbW. Michael Brown
pppm/gpu now using all gpu kernels. 
Mar 25 2011
e32f0861dafaW. Michael Brown
Fixing pppm/gpu to work with gpu pair styles. 
Mar 25 2011
a56bc868aa40W. Michael Brown
Fixing bug in GPU selection. 
Mar 15 2011
58f0eaa6b6bdW. Michael Brown
WORKING Force INTERP kernel. Commenting out debug checks. 
Mar 15 2011
2103c06aec1eW. Michael Brown
Some small optimizations to PPPM spread kernel. 
Mar 15 2011
f20bf5682178W. Michael Brown
Testing an optimization for PPPM interp. 
Mar 15 2011
1fb641092173W. Michael Brown
Adding PPPM interp kernel calls and tests. 
Mar 15 2011
fe8082d88afeW. Michael Brown
Undoing last commit. 
Mar 14 2011
2662c9ace653W. Michael Brown
Pencil decomposition defines now set according to architecture. 
Mar 14 2011
e2b96b6f4dd2W. Michael Brown
Changing pencil decomposition constants for test. 
Mar 14 2011
f9685d323170W. Michael Brown
Adding stuff for PPPM interpolation. 
Mar 14 2011
111de617166cW. Michael Brown
More bug fixes to modified PPPM charge spread kernel. 
Mar 9 2011
8e03c5891712W. Michael Brown
Fixing bug in PPPM GPU kernel from last commit. 
Mar 8 2011
7947dd346540W. Michael Brown
Modifying PPPM charge spread kernel to use multiple pencils per block. 
Mar 8 2011
0ff556412d03W. Michael Brown
Small improvement to morse kernel. 
Mar 7 2011
13d47d2874bfW. Michael Brown
Adding Morse potential (untested) 
Mar 7 2011
34ab4d831ef8W. Michael Brown
Fixing bug with texture binding when hybrid pair styles reallocs and 0 atoms on… 
Mar 2 2011
fe88e353d573W. Michael Brown
Fixing some bugs when using multiple GPU styles hybrid. 
Mar 1 2011
3e6ab71fa708W. Michael Brown
Bug fixes for charge spread kernel. 
Feb 28 2011
2f150052a0e3W. Michael Brown
Fix to new PPPM gpu kernel. 
Feb 28 2011
29bbace06a04W. Michael Brown
Switching PPPM kernel to use coalesced access. 
Feb 26 2011
242378a69ec5W. Michael Brown
Testing alternative delta storage instead of atom index in PPPM kernel. 
Feb 26 2011
f718bcfbaa9dW. Michael Brown
DROPPING TO 1 PPPM charge spread kernel. 
Feb 25 2011
73a8f5842ddcW. Michael Brown
Adding lj/expand/gpu. 
Feb 25 2011
a2671c967015W. Michael Brown
Fixing bug in virial calculation for hybrid styles. 
Feb 23 2011
fb2aab254282W. Michael Brown
NEW CODE FOR PAPER. 
Feb 23 2011
fd4fb582ca6fW. Michael Brown
Adding untested force interpolation kernel. 
Feb 22 2011
a3d6cff83633W. Michael Brown
CODE USED TO BENCHMARK CHARGE SPREADING FOR PAPER. 
Feb 21 2011
fc6934dc4581W. Michael Brown
Changing resequence skip to use the block size. 
Feb 17 2011
a5fa012ed304W. Michael Brown
Adding optimizations for Fermi. 
Feb 17 2011
e8da16ff23acW. Michael Brown
Finishing laptop optimization of PPPM charge spread kernels. 
Feb 17 2011
a5163fabd2a6W. Michael Brown
Working on PPPM kernels. 
Feb 17 2011
603dfac3f107W. Michael Brown
Working on charge spreading. 
Feb 16 2011
22b299f94c21W. Michael Brown
Fixed incorrect starting index for PPPM regression check. Removed unnecessary… 
Feb 14 2011
8364b1214ebaW. Michael Brown
Optimizing PPPM kernel. 
Feb 14 2011
c4e10709d3dcW. Michael Brown
3 Working charge spreading kernels for PPPM. 
Feb 14 2011
958894570520W. Michael Brown
Playing with pppm. 
Feb 11 2011
d7fdcef6ffa0W. Michael Brown
Adding additional charge spreading kernels 
Feb 10 2011
6c28a2c11797W. Michael Brown
Adding working charge spreading code. 
Feb 9 2011
074b76f73cbbW. Michael Brown
Fixing bugs in charge spreading. 
Feb 9 2011
3e25ee5338b9W. Michael Brown
Adding kernel for rho map; not currently working. 
Feb 8 2011
83be27433ca1W. Michael Brown
Working on PPPM charge spread kernel. 
Feb 2 2011
4c7f84fda0b6W. Michael Brown
Adding working atom index storage to particle map. 
Feb 2 2011
3e4a467b20ebW. Michael Brown
Adding working GPU particle map for PPPM. Reverting changes to force.h/cpp. 
Feb 2 2011
27c6fd9dd066W. Michael Brown
Updating PPPM particle_map kernel. 
Feb 2 2011
5d6435f4f3a9W. Michael Brown
Adding PPPM particle_map stuff. 
Feb 1 2011
b9305d30cf11W. Michael Brown
Adding data transfer for charge spreading. 
Feb 1 2011
343485d59237W. Michael Brown
Adding pppm stuff and incorporating data transfer. 
Jan 31 2011
c1c9fd47dee5W. Michael Brown
Hybrid working, but not fully tested. 
Jan 27 2011
b9c7e2bb9612W. Michael Brown
Trying to get hybrid gpu styles to work... 
Jan 25 2011
45971bf7329dW. Michael Brown
Atom data will not be copied multiple times if multiple styles need it. Adding… 
Jan 24 2011
6018dd02b156W. Michael Brown
Untested changes to support hybrid styles. 
Jan 24 2011
332443786681W. Michael Brown
Started updating to support multiple GPU styles. Incomplete - non-compilable. 
Jan 24 2011
0e41c61584e1W. Michael Brown
Removed use of LAMMPS timestep in gpu library. 
Jan 21 2011
0232e672eb20W. Michael Brown
Revert "Removing msm, openmp, and k-space stuff for LAMMPS patch." 
Jan 21 2011
20d10c6590b8W. Michael Brown
Merge ssh://yona.ccs.ornl.gov/~/git/lammps 
Jan 21 2011
15742bec1e97Mike Brown
Merge branch 'master' of http://git.icms.temple.edu/lammps-ro 
Jan 21 2011
353439c4148fsjplimp
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5546 f3b2605a-c512-4ea7… 
Jan 14 2011
64f71106f70aW. Michael Brown
Fixed makefile to correctly remove files. 
Jan 13 2011
a499b28469f3sjplimp
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5545 f3b2605a-c512-4ea7… 
Jan 12 2011
2228473d0321sjplimp
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5538 f3b2605a-c512-4ea7… 
Jan 12 2011
8f2257ecbf12sjplimp
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5537 f3b2605a-c512-4ea7… 
Jan 12 2011
fd33d2944213W. Michael Brown
Removing msm, openmp, and k-space stuff for LAMMPS patch. 
Jan 11 2011
9d654ca91cb2W. Michael Brown
Adding support for non-arithmetic mixing to charmm and updating docs and… 
Jan 7 2011
7c5cef048f57W. Michael Brown
Updating host-write buffer in CHARMM to zero all memory to avoid valgrind… 
Jan 6 2011
f85acfb1c26aW. Michael Brown
Switching back to old nbor list calculation 2 of 2 
Jan 5 2011
b5a8ac685833W. Michael Brown
Switching back to old nbor list calculation 1 of 2... 
Jan 5 2011
3acbf3b41d13W. Michael Brown
Switching to O2 neighbor list calculation for tests... 
Jan 5 2011
e90814093ff1W. Michael Brown
Added O^2 neighbor list build kernel. 
Jan 5 2011
b9a2679c1c42W. Michael Brown
Updating geryon; changing (numtyp)0 to (acctyp)0 for acctyp variables. 
Jan 4 2011
c1e53cf140a6W. Michael Brown
Final working charmm commit. 
Dec 31 2010
e1260023f76eW. Michael Brown
Optimized kernel from last commit. 
Dec 30 2010
56b96c172211W. Michael Brown
Replacing with another test for faster type data in charmm. 
Dec 30 2010
b85a2a1cf7ecW. Michael Brown
Adding a test kernel for faster shared types in charmm. 
Dec 30 2010
bc5876cf5a7aW. Michael Brown
Bug fixes to generate first working charmm/long/gpu 
Dec 29 2010
6f4d1de96cd7W. Michael Brown
Initial commit of charmm/long/gpu style w/out testing. 
Dec 29 2010
db1996f09517Mike Brown
Merge branch 'master' of http://git.icms.temple.edu/lammps-ro 
Dec 24 2010
d6432c9c6e30sjplimp
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5405 f3b2605a-c512-4ea7… 
Dec 17 2010
de14d7c0aa74W. Michael Brown
Eliminating compiler warnings. 
Dec 16 2010
b58bd9644421W. Michael Brown
Now using LAMMPS communicators. 
Dec 16 2010
aca0eefff15dW. Michael Brown
More efficient memory usage when particle split>0 and < 1. 
Dec 15 2010
85bd78dacd4cW. Michael Brown
Made pair_gpu_atom memory usage more efficient. 
Dec 15 2010
2fe5e84d6890W. Michael Brown
Updating object file location in lib/gpu makefiles 
Dec 14 2010
af4911b3778aW. Michael Brown
Adding MSM version of CMM coul/long/gpu style to library. 
Dec 13 2010
3125cdfd3030W. Michael Brown
Fixing CUDA version for new device query functions. 
Dec 13 2010
4366bfffd35epscrozi
Getting rid of extra CR characters at ends of lines. 
Nov 23 2010
5a82c99485e1pscrozi
Changes from Mike Brown. 
Nov 23 2010
40ea8e4d340fathomps
Added potential gradient columns 
Nov 8 2010
ecbd64b0627fsjplimp
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@4975 f3b2605a-c512-4ea7… 
Oct 6 2010
0f9ba37ca6d7athomps
Added hbnewflag argument to pair_style reax 
Sep 25 2010
68a5dad07d73athomps
Added hbnewflag argument to pair_style reax 
Sep 25 2010
131874819f67athomps
Cleaned up Makefiles and added include dependencies 
Sep 7 2010
7702ca9d35f4sjplimp
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@4621 f3b2605a-c512-4ea7… 
Aug 30 2010
350a269e24f6sjplimp
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@4249 f3b2605a-c512-4ea7… 
Jun 14 2010
7900602be9e8sjplimp
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@4065 f3b2605a-c512-4ea7… 
Apr 28 2010
1c9ce032a47epscrozi
Memory leak bug fix. 
Mar 19 2010
c0e0b656190cpscrozi
Adding changes from Mike Brown. 
Mar 4 2010
71ed5c03ecf7pscrozi
Improvements in lib/gpu 
Feb 11 2010
4ae4792b0099pscrozi
Updating lib/gpu to version 2. 
Feb 4 2010
ccefc1c3c0e7sjplimp
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3509 f3b2605a-c512-4ea7… 
Dec 4 2009
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