Diffusion lammps (efficient_neuronet) History

lammps/lib
efficient_neuronetec1abcb64185aeb72f765d7…

May 21 2013

rename directory for simpler scripting
ec1abcb64185
·Axel Kohlmeyer on May 21 2013, 15:02.
add customized makefiles
c39927fc83c6
·Axel Kohlmeyer on May 21 2013, 14:54.
use a goto instead of costly exception handling.
be5462e4a75b
·Axel Kohlmeyer on May 21 2013, 14:37.
add LAMMPS build environment
107da6492439
·Axel Kohlmeyer on May 21 2013, 14:35.
import voro++ version 0.4.5
706c4ccdaefd
·Axel Kohlmeyer on May 21 2013, 13:55.

May 18 2013

finalized concurrent multi-platform support for windows 32/64 and linux
91b79997d142
·Axel Kohlmeyer on May 18 2013, 18:41.

May 17 2013

support cross-compiling to 64-bit windows
1c7d97e02eae
·Axel Kohlmeyer on May 17 2013, 16:00.
support using arch specific object directories for libraries, so one can have…
46205c160793
·Axel Kohlmeyer on May 17 2013, 15:33.

May 15 2013

update colvars module with support for index files
f43a004f018e
·Axel Kohlmeyer on May 15 2013, 15:17.
Merge branch 'compilation-bugfix' into lammps-icms
c191cb296b29
·Axel Kohlmeyer on May 15 2013, 14:26.
preconfigure ATC and AWPMD to use internal BLAS/LAPACK
3929d2bd1d19
·Axel Kohlmeyer on May 15 2013, 14:21.
update makefile to include README
d647835187b6
·Axel Kohlmeyer on May 15 2013, 12:08.
update README for liblinalg
d4f1e9535f97
·Axel Kohlmeyer on May 15 2013, 12:03.
update to LAPACK 3.4.2, update Makefile
22c9c3b3908e
·Axel Kohlmeyer on May 15 2013, 11:57.
update local blas/lapack copy with additional files needed for awpmd update to…
559c81427331
·Axel Kohlmeyer on May 15 2013, 11:28.
make atc and awpmd use the local blas/lapack by default
53bb83bb33e6
·Axel Kohlmeyer on May 15 2013, 11:27.

Apr 23 2013

update version string
16cd5d00889d
·Axel Kohlmeyer on Apr 23 2013, 10:34.
more detailed error message
f788c3138388
·Axel Kohlmeyer on Apr 23 2013, 10:20.

Apr 17 2013

update of colvars library to svn of 2013-04-17
42c512e1a0f5
·Axel Kohlmeyer on Apr 17 2013, 11:36.

Feb 13 2013

update of colvars library to version 2013-01-30
354de185b13a
·Axel Kohlmeyer on Feb 13 2013, 11:24.

Jan 28 2013

double inclusion protection bugfix
4958bb300a69
·Axel Kohlmeyer on Jan 28 2013, 11:46.

Jan 23 2013

update colvars module to version 2013-01-23
8e2290c770ba
·Axel Kohlmeyer on Jan 23 2013, 12:16.

Jan 18 2013

Merge branch 'lammps-icms' into lammps-colvars
436f9457232b
·Axel Kohlmeyer on Jan 18 2013, 13:54.
Merge branch 'master' into lammps-icms
e1709a44891d
·Axel Kohlmeyer on Jan 18 2013, 13:50.

Jan 17 2013

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9276 f3b2605a-c512-4ea7…
f70511be8768
·sjplimp on Jan 17 2013, 16:50.

Jan 16 2013

fix another merge bug
48fbb5605f1b
·Axel Kohlmeyer on Jan 16 2013, 13:49.
correct error from broken merge
100cafe5fffc
·Axel Kohlmeyer on Jan 16 2013, 13:47.

Jan 14 2013

Merge branch 'lammps-icms' into lammps-colvars
b826d2958ef1
·Axel Kohlmeyer on Jan 14 2013, 12:22.

Jan 9 2013

Merge branch 'master' into lammps-icms
427161ef56aa
·Axel Kohlmeyer on Jan 9 2013, 13:09.

Jan 2 2013

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9175 f3b2605a-c512-4ea7…
c8624bc7ebb8
·sjplimp on Jan 2 2013, 17:27.

Dec 21 2012

import from colvars svn repo
c58b5f4d1b87
·Axel Kohlmeyer on Dec 21 2012, 13:35.

Nov 30 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9130 f3b2605a-c512-4ea7…
87215c925c6f
·sjplimp on Nov 30 2012, 19:03.

Nov 28 2012

update colvar module code to version of nov 20th
198c2a9f717f
·Axel Kohlmeyer on Nov 28 2012, 16:43.

Oct 23 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8996 f3b2605a-c512-4ea7…
fdce17720328
·sjplimp on Oct 23 2012, 18:57.
update colvars library to Oct 03 2012 version
e8aaeba77e0a
·Axel Kohlmeyer on Oct 23 2012, 10:06.

Oct 12 2012

Merge branch 'master' into lammps-icms
9a0e9670fb05
·Axel Kohlmeyer on Oct 12 2012, 14:46.

Oct 10 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8937 f3b2605a-c512-4ea7…
6bbadce42db9
·sjplimp on Oct 10 2012, 17:44.

Oct 8 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8922 f3b2605a-c512-4ea7…
14bcb1e6d00c
·sjplimp on Oct 8 2012, 17:29.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8921 f3b2605a-c512-4ea7…
856a2374001f
·sjplimp on Oct 8 2012, 17:29.

Oct 4 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8904 f3b2605a-c512-4ea7…
4895715bdd0c
·sjplimp on Oct 4 2012, 16:58.

Sep 21 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8810 f3b2605a-c512-4ea7…
209999068ced
·sjplimp on Sep 21 2012, 17:57.

Sep 11 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8763 f3b2605a-c512-4ea7…
edeec7b788a8
·sjplimp on Sep 11 2012, 15:57.
Merge branch 'master' into lammps-icms
3d91565a4893
·Axel Kohlmeyer on Sep 11 2012, 11:01.
fix compilation problem with gcc 4.7.x
55497c21c067
·Axel Kohlmeyer on Sep 11 2012, 10:58.

Sep 10 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8757 f3b2605a-c512-4ea7…
dfb38392c991
·sjplimp on Sep 10 2012, 16:11.

Sep 8 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8756 f3b2605a-c512-4ea7…
49ceafd44797
·sjplimp on Sep 8 2012, 01:08.

Aug 29 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8732 f3b2605a-c512-4ea7…
249f5349f0ae
·sjplimp on Aug 29 2012, 16:04.

Aug 25 2012

Merge branch 'master' into lammps-icms
c6552844abcf
·Axel Kohlmeyer on Aug 25 2012, 22:21.

Aug 23 2012

Merge branch 'master' into lammps-icms
0d36adc00bf0
·Axel Kohlmeyer on Aug 23 2012, 17:58.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8702 f3b2605a-c512-4ea7…
690a72edc7a1
·sjplimp on Aug 23 2012, 15:09.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8701 f3b2605a-c512-4ea7…
81ec0e96e17c
·sjplimp on Aug 23 2012, 15:09.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8699 f3b2605a-c512-4ea7…
c81a8f1bc932
·sjplimp on Aug 23 2012, 15:03.

Aug 21 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8694 f3b2605a-c512-4ea7…
647ea4c29f79
·sjplimp on Aug 21 2012, 15:59.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8693 f3b2605a-c512-4ea7…
31551d81fdf9
·sjplimp on Aug 21 2012, 15:57.

Aug 18 2012

Merge branch 'lammps-icms' into lammps-colvars
d61136b1d08f
·Axel Kohlmeyer on Aug 18 2012, 23:19.

Aug 15 2012

Merge branch 'master' into lammps-icms
ffc41c52c5cd
·Axel Kohlmeyer on Aug 15 2012, 14:38.

Aug 14 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8648 f3b2605a-c512-4ea7…
7365c2cfe623
·sjplimp on Aug 14 2012, 16:22.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8647 f3b2605a-c512-4ea7…
f2bade874d39
·sjplimp on Aug 14 2012, 16:21.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8646 f3b2605a-c512-4ea7…
e19e06952fcc
·sjplimp on Aug 14 2012, 16:20.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8645 f3b2605a-c512-4ea7…
15a86b4bcdbf
·sjplimp on Aug 14 2012, 16:17.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8644 f3b2605a-c512-4ea7…
533db036493e
·sjplimp on Aug 14 2012, 16:16.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8643 f3b2605a-c512-4ea7…
1b8aa27fe555
·sjplimp on Aug 14 2012, 16:16.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8642 f3b2605a-c512-4ea7…
14e3a6e2c9b4
·sjplimp on Aug 14 2012, 16:15.

Aug 8 2012

update colvarmodule code to svn as of aug 8 2012
b898d5d163b4
·Axel Kohlmeyer on Aug 8 2012, 11:15.

Aug 3 2012

Merge branch 'lammps-colvars' into lammps-icms
4c70fbfd8b93
·Axel Kohlmeyer on Aug 3 2012, 11:40.
some more cutomizations for libraries
4bc860561ca5
·Axel Kohlmeyer on Aug 3 2012, 11:32.
upgrade colvars module to july 17 2012 version
fa5861bc2d27
·Axel Kohlmeyer on Aug 3 2012, 11:15.

Jun 30 2012

Merge branch 'master' into lammps-icms
2a099bfedb48
·Axel Kohlmeyer on Jun 30 2012, 17:23.

Jun 29 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8433 f3b2605a-c512-4ea7…
fee52f2fac2b
·sjplimp on Jun 29 2012, 19:52.

Jun 28 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8419 f3b2605a-c512-4ea7…
9db45bcb9269
·sjplimp on Jun 28 2012, 01:15.

Jun 24 2012

update colvars module with the latest version
e163a2f089c9
·Axel Kohlmeyer on Jun 24 2012, 02:10.
Merge branch 'lammps-icms' into lammps-colvars
5c64815a2a39
·Axel Kohlmeyer on Jun 24 2012, 02:06.

Jun 20 2012

Merge branch 'master' into lammps-icms
4441f9b5aafd
·Axel Kohlmeyer on Jun 20 2012, 15:11.

Jun 19 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8336 f3b2605a-c512-4ea7…
d4c19826bac9
·sjplimp on Jun 19 2012, 21:45.

Jun 15 2012

Merge branch 'lammps-icms' into lammps-colvars
725578a97828
·Axel Kohlmeyer on Jun 15 2012, 20:37.

Jun 14 2012

Merge branch 'lammps-icms' into lammps-molfile
0fede4ae98e9
·Axel Kohlmeyer on Jun 14 2012, 16:40.
Merge branch 'master' into lammps-icms
dd4f21087a56
·Axel Kohlmeyer on Jun 14 2012, 14:56.

Jun 13 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8279 f3b2605a-c512-4ea7…
03967d227031
·sjplimp on Jun 13 2012, 18:40.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8278 f3b2605a-c512-4ea7…
49a004194cee
·sjplimp on Jun 13 2012, 18:35.

Jun 8 2012

Merge branch 'lammps-icms' into lammps-colvars
b71eaa9e1d70
·Axel Kohlmeyer on Jun 8 2012, 01:17.
update colvars library to latest version
13b28920ac91
·Axel Kohlmeyer on Jun 8 2012, 01:12.
fix typo
fffc66eef2ef
·Axel Kohlmeyer on Jun 8 2012, 00:31.

Jun 1 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8207 f3b2605a-c512-4ea7…
611e614170e9
·sjplimp on Jun 1 2012, 19:21.
fix typo
63ec8368b0e2
·Axel Kohlmeyer on Jun 1 2012, 06:59.
update library makefiles for cross-compilation with new compile
d4c275d4cc41
·Axel Kohlmeyer on Jun 1 2012, 06:59.

May 23 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8162 f3b2605a-c512-4ea7…
1cfdda1f82b6
·sjplimp on May 23 2012, 18:20.

Apr 29 2012

compile poems lib with optimization
1b011d92f2f3
·Axel Kohlmeyer on Apr 29 2012, 01:34.
compile meam lib with optimization
481b12a04a63
·Axel Kohlmeyer on Apr 29 2012, 01:34.

Apr 21 2012

import filename bugfix from colvars repo
2e0a78eb82b1
·Axel Kohlmeyer on Apr 21 2012, 00:56.

Apr 20 2012

Merge branch 'master' into lammps-icms
ca9da5d35ee1
·Axel Kohlmeyer on Apr 20 2012, 19:50.

Apr 19 2012

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8027 f3b2605a-c512-4ea7…
0a85b18a46e8
·sjplimp on Apr 19 2012, 21:30.

Apr 13 2012

pmf output bugfix imported from colvars upstream
fa7fb14b6438
·Axel Kohlmeyer on Apr 13 2012, 00:52.

Mar 30 2012

don't use cudpp and relocatable compilation.
816e87c46f16
·Axel Kohlmeyer on Mar 30 2012, 15:53.

Mar 29 2012

Merge branch 'lammps-icms' into lammps-colvars
22d52a2141e3
·Axel Kohlmeyer on Mar 29 2012, 16:47.
Merge branch 'master' into lammps-icms
99851266a8fc
·Axel Kohlmeyer on Mar 29 2012, 16:47.
rename c++ files in colvars to match common style
eadce7749bc5
·Axel Kohlmeyer on Mar 29 2012, 16:00.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7989 f3b2605a-c512-4ea7…
f3905bf229dd
·sjplimp on Mar 29 2012, 00:10.

Mar 25 2012

update build system
ebfba1ea654b
·Axel Kohlmeyer on Mar 25 2012, 01:39.
update colvars library from svn archive
cc0f97415170
·Axel Kohlmeyer on Mar 25 2012, 01:39.

Mar 22 2012

import latest colvar module code from svn.
1b6cfc4caa97
·Axel Kohlmeyer on Mar 22 2012, 01:39.

lammps/libefficient_neuronetec1abcb64185aeb72f765d7…

May 21 2013

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lammps/lib
efficient_neuronetec1abcb64185aeb72f765d7…