Diffusion lammps (efficient_neuronet) History

lammps/lib/colvars
efficient_neuronetd7fa3ba7185fc01b61b3fb1…

Jul 21 2016

correct test for input value
d7fa3ba7185f
·Axel Kohlmeyer on Jul 21 2016, 15:50.
make sure to provide return values in functions requiring it.
34bb34893c27
·Axel Kohlmeyer on Jul 21 2016, 15:35.

Jul 7 2016

update colvars library to version 2016-07-05
d5beeb18db3b
·Axel Kohlmeyer on Jul 7 2016, 03:27.

Jun 27 2016

update colvars library to 2016-06-23 version
f47a9e33e6dc
·Axel Kohlmeyer on Jun 27 2016, 17:33.

Jun 17 2016

update colvars library to version 2016-06-14
da8b07b4f090
·Axel Kohlmeyer on Jun 17 2016, 14:30.

Jun 10 2016

update colvars library to version 2016-06-09
48cec4d7d21a
·Axel Kohlmeyer on Jun 10 2016, 11:54.

Jun 1 2016

update colvars to version 2016-05-23
37b2124cd5e6
·Axel Kohlmeyer on Jun 1 2016, 13:00.

May 11 2016

update colvars library to 2016-05-10 version
8b0323df321d
·Axel Kohlmeyer on May 11 2016, 12:55.

May 6 2016

update to colvars library to version 2016-05-03
fbaa883cb675
·Axel Kohlmeyer on May 6 2016, 10:40.

Apr 29 2016

small updates to colvars to version 2016-04-28
90dddbbe97a6
·Axel Kohlmeyer on Apr 29 2016, 13:30.

Apr 27 2016

update to colvars version of 27-04-2016
7005d59d254c
·Axel Kohlmeyer on Apr 27 2016, 19:17.

Apr 23 2016

update colvars to version of 2016-04-20
5f0578f95a42
·Axel Kohlmeyer on Apr 23 2016, 02:50.

Apr 15 2016

update colvars library with bugfixes/updates from giacomo and jerome
ee0630afea58
·Axel Kohlmeyer on Apr 15 2016, 00:43.

Apr 8 2016

minor cleanups for colvars. update to version 2016-04-08.
266c2476556c
·Axel Kohlmeyer on Apr 8 2016, 15:43.
import colvars code with multi-thread support
5a26b927bcff
·Axel Kohlmeyer on Apr 8 2016, 15:30.

Mar 9 2016

update to colvars library as of 2016-03-08
33d4321c4659
·Axel Kohlmeyer on Mar 9 2016, 12:08.

Feb 28 2016

some more colvars updates to silence compiler warnings
28c510d67bea
·Axel Kohlmeyer on Feb 28 2016, 16:53.
merge colvars updates as of feb 28th
ebd41bc07fc2
·Axel Kohlmeyer on Feb 28 2016, 16:16.

Oct 22 2015

record updated version number from colvars upstream repository
5e1998a1bd94
·Axel Kohlmeyer on Oct 22 2015, 22:54.

Oct 14 2015

adjust code in switch statement for enabling colvars similar to what is done…
8dc20218b08d
·Axel Kohlmeyer on Oct 14 2015, 01:13.

Oct 13 2015

add argument checking and handle timerstep counters with 64-bit integers…
8cdb890b10c6
·Axel Kohlmeyer on Oct 13 2015, 18:16.

Oct 12 2015

update colvars library to version from 2015-09-29
52d245a964a9
·Axel Kohlmeyer on Oct 12 2015, 17:29.

Oct 9 2015

delete out-of-bounds label.
97e6e67ca9a5
·Axel Kohlmeyer on Oct 9 2015, 00:50.

Sep 3 2015

update colvars to version from Sept 3rd 2015
7a06a4dc9f42
·Axel Kohlmeyer on Sep 3 2015, 19:33.

Aug 14 2015

colvars update 2015-08-12
55c32a2e06bb
·Axel Kohlmeyer on Aug 14 2015, 15:28.

Jul 21 2015

update colvars to version 2015-07-21
585a65c560fe
·Axel Kohlmeyer on Jul 21 2015, 19:25.

Jun 5 2015

make library compiles compatible with building a shared object
938c85964b82
·Axel Kohlmeyer on Jun 5 2015, 18:13.

Apr 23 2015

update colvars library to the latest bugfixes as of 2015-04-22
673154cad370
·Axel Kohlmeyer on Apr 23 2015, 02:35.

Apr 19 2015

update colvars to version 2015-04-03
2a20dc2ef962
·Axel Kohlmeyer on Apr 19 2015, 01:43.

Mar 16 2015

update colvars library to state of 2015-03-15
945fea8e402f
·Axel Kohlmeyer on Mar 16 2015, 19:00.

Mar 13 2015

update colvars to 2015-03-12 version
2a773a9a97b5
·Axel Kohlmeyer on Mar 13 2015, 16:08.

Mar 6 2015

update colvars library to state of feb 27th
13e37b7d0d72
·Axel Kohlmeyer on Mar 6 2015, 16:49.

Feb 17 2015

update colvars to version 2015-02-04
f0829163335a
·Axel Kohlmeyer on Feb 17 2015, 20:22.

Feb 2 2015

update of colvars to 2015-02-02 version
00f612dd1922
·Axel Kohlmeyer on Feb 2 2015, 21:56.

Jan 28 2015

updating colvars library to state of 2015-01-27
dcd97c4ecc6d
·Axel Kohlmeyer on Jan 28 2015, 20:36.

Jan 23 2015

update colvars to latest git status
aa5f9ea99122
·Axel Kohlmeyer on Jan 23 2015, 21:15.

Jan 22 2015

update colvars to 2015-01-22 status
3402cfb5f320
·Axel Kohlmeyer on Jan 22 2015, 22:39.
update colvars library to version 2015-01-21
94af385b692f
·Axel Kohlmeyer on Jan 22 2015, 00:43.

Jan 19 2015

update colvars package from git repo
75b69a0841a4
·Axel Kohlmeyer on Jan 19 2015, 22:43.

Dec 23 2014

update colvars library to 10 dec 2014 version
62b4652b8829
·Axel Kohlmeyer on Dec 23 2014, 20:48.

Dec 10 2014

latest colvars update from git repo
492a56ac5960
·Axel Kohlmeyer on Dec 10 2014, 16:42.

Dec 9 2014

update colvars module to latest git version
4bb3c8c16e3a
·Axel Kohlmeyer on Dec 9 2014, 16:59.

Nov 21 2014

today's colvars update
d91522507786
·Axel Kohlmeyer on Nov 21 2014, 21:43.

Nov 20 2014

import bugfixes from colvars repo. version is now 2014-11-20.
e3b59cb3d2ef
·Axel Kohlmeyer on Nov 20 2014, 18:45.

Nov 14 2014

update the colvars module to the version 2014-11-13
8b4ce4d893fa
·Axel Kohlmeyer on Nov 14 2014, 18:34.

Nov 6 2014

update colvars from git repo to version 2014-11-06
9fd50e4b2d4f
·Axel Kohlmeyer on Nov 6 2014, 22:27.

Nov 1 2014

bugfix/update
1e0d8a1e14aa
·Axel Kohlmeyer on Nov 1 2014, 05:43.

Oct 31 2014

include bugfix from colvars git repo
62c40c86fcef
·Axel Kohlmeyer on Oct 31 2014, 07:08.

Oct 30 2014

more colvars library refactoring
46e503e23b64
·Axel Kohlmeyer on Oct 30 2014, 10:19.

Oct 29 2014

remove unused makefile
70c1ea7d8ed4
·Axel Kohlmeyer on Oct 29 2014, 23:43.
update colvars library one more time
4601ba2bce4b
·Axel Kohlmeyer on Oct 29 2014, 21:14.
import last night's colvars updates
a9e124db15cb
·Axel Kohlmeyer on Oct 29 2014, 10:40.

Oct 28 2014

another day, another colvars update
5890ef420b64
·Axel Kohlmeyer on Oct 28 2014, 23:05.

Oct 27 2014

another synchronization with colvars git repo
27f5998d9306
·Axel Kohlmeyer on Oct 27 2014, 19:48.
fix remaining prefix issue reported by steven strong
54ae54605ccc
·Axel Kohlmeyer on Oct 27 2014, 19:39.
update colvars library from git repo again
f7d5f002f677
·Axel Kohlmeyer on Oct 27 2014, 07:36.

Oct 26 2014

more colvars updates. now prints interface version date,too.
f4718e986164
·Axel Kohlmeyer on Oct 26 2014, 08:16.

Oct 25 2014

add forgotten change from colvars update
4c488e63d5c2
·Axel Kohlmeyer on Oct 25 2014, 17:27.
another colvars update. this time from giacomo
e9cc0d73d0a7
·Axel Kohlmeyer on Oct 25 2014, 15:21.

Oct 24 2014

formatting update for colvars library
0e550d0e275d
·Axel Kohlmeyer on Oct 24 2014, 23:09.
update colvars to the state of 2014-10-24
522aca3c6115
·Axel Kohlmeyer on Oct 24 2014, 18:14.

Oct 23 2014

update colvars library to version 2014-10-23
fa7b08639029
·Axel Kohlmeyer on Oct 23 2014, 17:45.

Oct 22 2014

synchronize with the colvars git repo again
c47c1428c211
·Axel Kohlmeyer on Oct 22 2014, 16:38.

Oct 21 2014

update colvars to state of 2014-10-21 with some additional refactoring
2267cc7839a3
·Axel Kohlmeyer on Oct 21 2014, 20:00.

Oct 16 2014

update colvars library to the state of 16 Oct 2014
ac3359b2d6d3
·Axel Kohlmeyer on Oct 16 2014, 23:46.

Oct 7 2014

update dependencies in colvars makefiles
045f593bf64c
·Axel Kohlmeyer on Oct 7 2014, 18:57.
update colvars library to state of oct 10th
13955c8c6c31
·Axel Kohlmeyer on Oct 7 2014, 18:39.

Oct 6 2014

more updates to the colvars library
645cb88b2729
·Axel Kohlmeyer on Oct 6 2014, 17:39.

Oct 2 2014

update colvars module to the latest version from the git repo
5578d988b0f7
·Axel Kohlmeyer on Oct 2 2014, 22:48.

Aug 13 2014

update colvars makefiles
e6c421f61d9e
·Axel Kohlmeyer on Aug 13 2014, 21:24.
update colvars module from git repo.
5c41d0ef6283
·Axel Kohlmeyer on Aug 13 2014, 21:16.

Jun 4 2014

Merge remote branch 'lammps-ro/master' into lammps-icms
cbdad2a2b3d3
·Axel Kohlmeyer on Jun 4 2014, 14:16.

Jun 3 2014

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12063 f3b2605a-c512-4ea7…
5593d42f32f3
·sjplimp on Jun 3 2014, 15:19.

May 12 2014

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11969 f3b2605a-c512-4ea7…
d17c0325d423
·sjplimp on May 12 2014, 17:08.

May 8 2014

step version of colvars library
8c9c0ffd5330
·Axel Kohlmeyer on May 8 2014, 23:26.
merge in latest changes from upstream colvars code
9dbddf920bdd
·Axel Kohlmeyer on May 8 2014, 23:17.
update colvars library to produce no more warnings with g++ -Wall
b38cb2573ecb
·Axel Kohlmeyer on May 8 2014, 23:17.

Apr 18 2014

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11821 f3b2605a-c512-4ea7…
287db2231ad2
·sjplimp on Apr 18 2014, 16:07.

Apr 10 2014

various little cleanups to silence compiler warnings
5fcfc9f575fc
·Axel Kohlmeyer on Apr 10 2014, 18:21.

Feb 1 2014

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11448 f3b2605a-c512-4ea7…
19e47c5264ec
·sjplimp on Feb 1 2014, 19:11.

Dec 16 2013

update colvars code to git version as of 2013-12-16
58c693abb681
·Axel Kohlmeyer on Dec 16 2013, 13:51.

Oct 30 2013

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10899 f3b2605a-c512-4ea7…
d07827a3bca5
·sjplimp on Oct 30 2013, 16:25.

Oct 24 2013

update colvars with .xyz support by jerome
b544776e5794
·Axel Kohlmeyer on Oct 24 2013, 10:13.

Sep 23 2013

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10823 f3b2605a-c512-4ea7…
6203761e12cc
·sjplimp on Sep 23 2013, 18:47.

Sep 19 2013

need to read index files in binary mode since seeking is not reliable in text…
f632447c4dda
·Axel Kohlmeyer on Sep 19 2013, 21:07.

Jun 28 2013

Merge remote branch 'lammps-ro/master' into lammps-icms
2b1e3a30bd1a
·Axel Kohlmeyer on Jun 28 2013, 13:09.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10119 f3b2605a-c512-4ea7…
6dc244769531
·sjplimp on Jun 28 2013, 00:48.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10118 f3b2605a-c512-4ea7…
4da20dce992f
·sjplimp on Jun 28 2013, 00:48.

Jun 27 2013

documentation update for colvars
a5d55a6f764a
·Axel Kohlmeyer on Jun 27 2013, 20:26.

Jun 25 2013

add wrapper makefiles that allow to use non-MPI libraries and makefiles
d45dd25ce646
·Axel Kohlmeyer on Jun 25 2013, 11:50.

Jun 23 2013

import changes from colvars repo
0024e1afc3a9
·Axel Kohlmeyer on Jun 23 2013, 14:49.

Jun 19 2013

provide meaningful log message when re-initializing masses
6f48ddb24fb1
·Axel Kohlmeyer on Jun 19 2013, 00:51.
more changes to support late initialization of masses
7d444dcb714b
·Axel Kohlmeyer on Jun 19 2013, 00:22.

Jun 18 2013

import colvar module changes that allow resetting masses
5a7dd0e74e1c
·Axel Kohlmeyer on Jun 18 2013, 23:13.

Jun 14 2013

tweak to colvarmodule output
601856713494
·Axel Kohlmeyer on Jun 14 2013, 12:19.

Jun 13 2013

update colvars library
8cd52ce9a9ac
·Axel Kohlmeyer on Jun 13 2013, 14:51.

Jun 11 2013

small updates/corrections from giacomo
0567f76d4c67
·Axel Kohlmeyer on Jun 11 2013, 06:16.

Jun 10 2013

whitespace fixes in colvars library
e03889338515
·Axel Kohlmeyer on Jun 10 2013, 14:47.

Jun 7 2013

update version number
3d664382ae72
·Axel Kohlmeyer on Jun 7 2013, 14:43.
update colvars library from github repo
df08be2f013f
·Axel Kohlmeyer on Jun 7 2013, 14:39.