Diffusion lammps (lammm-devel) History

lammps/lib
lammm-devela6b7299ddc2b996353886ec…

Oct 8 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7048 f3b2605a-c512-4ea7…
4591d9958dbb
·sjplimp on Oct 8 2011, 01:52.

Sep 30 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7021 f3b2605a-c512-4ea7…
79e10871461a
·sjplimp on Sep 30 2011, 18:58.

Sep 24 2011

some small updates and corrections
8aad0f31e099
·Axel Kohlmeyer on Sep 24 2011, 20:47.

Sep 16 2011

Updating code so that only free memory output is on 1st GPU.
73b8888b9816
·W. Michael Brown on Sep 16 2011, 20:00.
Merge branch 'master' into ak-fix
7f9bc64bbdea
·Axel Kohlmeyer on Sep 16 2011, 15:44.

Sep 14 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6960 f3b2605a-c512-4ea7…
1e7562efc28b
·sjplimp on Sep 14 2011, 21:55.

Sep 13 2011

Changed order of CPU cell bin in neighbor calculation to allow overlap with…
2a91f37ba8d7
·W. Michael Brown on Sep 13 2011, 23:51.
Implemented hybrid neighbor list builds.
cde64685ebe0
·W. Michael Brown on Sep 13 2011, 20:54.

Sep 12 2011

Adding storage for hybrid neighbor list build data.
bea92ccf6938
·W. Michael Brown on Sep 12 2011, 22:37.
Changed files to accept a new GPU mode for hybrid neighboring.
d4b10370364d
·W. Michael Brown on Sep 12 2011, 22:09.
Fixed some comments to reflect new neighboring stuff.
f20b7ed31fcd
·W. Michael Brown on Sep 12 2011, 15:24.

Sep 1 2011

Merge branch 'master' into ak-fix
6db868e4c518
·Axel Kohlmeyer on Sep 1 2011, 21:10.

Aug 31 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6867 f3b2605a-c512-4ea7…
f9b08962bd25
·sjplimp on Aug 31 2011, 16:31.

Aug 24 2011

a few more minor GPU cleanups.
9a13f65f8dab
·Axel Kohlmeyer on Aug 24 2011, 20:03.
Merge branch 'master' into fermi-mods
c5479893f41e
·Axel Kohlmeyer on Aug 24 2011, 19:43.

Aug 23 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6766 f3b2605a-c512-4ea7…
541c47f4d45d
·sjplimp on Aug 23 2011, 23:12.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6765 f3b2605a-c512-4ea7…
7a1f6fc1ee18
·sjplimp on Aug 23 2011, 23:11.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6763 f3b2605a-c512-4ea7…
a3a957195a1b
·sjplimp on Aug 23 2011, 22:58.
Fixing some typos.
46240b230030
·W. Michael Brown on Aug 23 2011, 16:44.
Merge branch 'master' of http://git.icms.temple.edu/lammps-ro
8b29a07c2302
·Mike Brown on Aug 23 2011, 00:22.

Aug 20 2011

adjust for local setup.
61796505fd89
·Axel Kohlmeyer on Aug 20 2011, 00:40.

Aug 18 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6729 f3b2605a-c512-4ea7…
d22491de1767
·sjplimp on Aug 18 2011, 19:32.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6728 f3b2605a-c512-4ea7…
3ef0f1d5d647
·sjplimp on Aug 18 2011, 19:32.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6727 f3b2605a-c512-4ea7…
84b5b0bef886
·sjplimp on Aug 18 2011, 19:32.

Aug 8 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6625 f3b2605a-c512-4ea7…
3c1cefdba03b
·sjplimp on Aug 8 2011, 21:51.

Aug 1 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6573 f3b2605a-c512-4ea7…
c80cc31a2224
·sjplimp on Aug 1 2011, 16:07.

Jul 27 2011

Adding an OCL_VENDOR preprocessor definition.
43d9cc7811f3
·W. Michael Brown on Jul 27 2011, 23:31.
Merge branch 'master' of ssh://yona.ccs.ornl.gov/~/git/lammps
6d39a40b37d3
·W. Michael Brown on Jul 27 2011, 23:02.
Merge branch 'master' of http://git.icms.temple.edu/lammps-ro
0736327e5d08
·Mike Brown on Jul 27 2011, 23:01.
Adding preprocessor to OpenCL strings and as a dependency for both.
bf6d34160e7f
·W. Michael Brown on Jul 27 2011, 22:58.
Fixing OpenCL to compile with new geryon converter.
7b3188fec8cc
·W. Michael Brown on Jul 27 2011, 22:50.
Changed geryon file to string behaviour and updated only nvidia files.
8540f8500a60
·W. Michael Brown on Jul 27 2011, 22:31.
Changing __inline to ucl_inline.
cd953bfc5d3c
·W. Michael Brown on Jul 27 2011, 20:29.
Renaming nv_kernel_def.
f7abd1cb5e67
·W. Michael Brown on Jul 27 2011, 20:23.
Consolidating all of the preprocessor stuff.
13a3d4cb6dcb
·W. Michael Brown on Jul 27 2011, 20:00.

Jul 26 2011

Bug fixes for e_coul when cutoff is smaller than vdw.
6ffdce24e9bf
·W. Michael Brown on Jul 26 2011, 23:54.
Adding coul/long.
c0872e0d7c3a
·W. Michael Brown on Jul 26 2011, 22:45.
Finished renaming, adding namespace.
121346946cee
·W. Michael Brown on Jul 26 2011, 20:20.

Jul 19 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6544 f3b2605a-c512-4ea7…
5f6811f4e03d
·sjplimp on Jul 19 2011, 20:31.

Jul 12 2011

Update pppm to work with opencl.
0ac36b24091d
·W. Michael Brown on Jul 12 2011, 01:36.
Renaming charmm external functions.
3ff236d7b5df
·W. Michael Brown on Jul 12 2011, 01:02.

Jul 5 2011

Fixing memory grow bug for PPPM.
3a4c2dcc365e
·W. Michael Brown on Jul 5 2011, 19:35.

Jun 24 2011

Merge branch 'master' of ssh://yona.ccs.ornl.gov/~/git/lammps
405de0626583
·W. Michael Brown on Jun 24 2011, 18:32.
Merge branch 'master' of http://git.icms.temple.edu/lammps-ro
c71a4826ef0c
·Mike Brown on Jun 24 2011, 18:30.

Jun 20 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6453 f3b2605a-c512-4ea7…
472a7e2e5f85
·sjplimp on Jun 20 2011, 18:43.

Jun 17 2011

Renaming...
2eddcf044a78
·W. Michael Brown on Jun 17 2011, 21:40.

Jun 14 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6407 f3b2605a-c512-4ea7…
945343265e0e
·sjplimp on Jun 14 2011, 15:34.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6406 f3b2605a-c512-4ea7…
9418bacff7fa
·sjplimp on Jun 14 2011, 15:33.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6405 f3b2605a-c512-4ea7…
479275be1d0b
·sjplimp on Jun 14 2011, 15:32.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6378 f3b2605a-c512-4ea7…
7025ec968fc7
·sjplimp on Jun 14 2011, 00:22.

Jun 13 2011

Getting rid of _ext from kernel names.
e7ce7a5a93c0
·W. Michael Brown on Jun 13 2011, 23:09.
More renaming.
47177cc75f5b
·W. Michael Brown on Jun 13 2011, 22:56.

Jun 11 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6363 f3b2605a-c512-4ea7…
91240f781e61
·sjplimp on Jun 11 2011, 01:25.

Jun 10 2011

More renaming...
9ee36a3c2298
·W. Michael Brown on Jun 10 2011, 23:31.
Renaming more files.
7e0f12700839
·W. Michael Brown on Jun 10 2011, 21:34.
Renamed a bunch of files.
31a477c9a2a8
·W. Michael Brown on Jun 10 2011, 17:53.

Jun 8 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6340 f3b2605a-c512-4ea7…
98ccbe3e6948
·sjplimp on Jun 8 2011, 22:24.

Jun 3 2011

Merge branch 'master' of http://git.icms.temple.edu/lammps-ro
a0e800130aa7
·Mike Brown on Jun 3 2011, 21:28.

Jun 1 2011

Minor changes to get rid of compiler warnings.
73eda48218a5
·W. Michael Brown on Jun 1 2011, 21:40.

May 31 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6262 f3b2605a-c512-4ea7…
7af10d8e0fe9
·sjplimp on May 31 2011, 23:09.

May 27 2011

Fixing bug in lj/class2/long/gpu.
6d71b9bd9b02
·W. Michael Brown on May 27 2011, 21:18.
Adding lj/class2 and lj/class2/coul/long.
31c5264ed747
·W. Michael Brown on May 27 2011, 19:19.

May 25 2011

Fixing a bug for maximum neighbor calculation for sphere/asphere mixtures.
f97cde564d45
·W. Michael Brown on May 25 2011, 22:05.
Removing nall from kernel calls. Changing ellipsoid neighbor calls to use a…
0425dd037e7b
·W. Michael Brown on May 25 2011, 02:15.

May 24 2011

Modifying some files to support cuda 2.3. Adding asphere-point package with…
7c57f6793ec3
·W. Michael Brown on May 24 2011, 19:53.
Merge branch 'master' of ssh://yona.ccs.ornl.gov/~/git/lammps
d2ca45aef65c
·W. Michael Brown on May 24 2011, 17:34.
Merge branch 'master' of http://git.icms.temple.edu/lammps-ro
54958483452e
·Mike Brown on May 24 2011, 17:31.

May 23 2011

Fixed bug in gayberne ordered ilist return when split < 1.0 and list needed for…
d80daafc56e9
·W. Michael Brown on May 23 2011, 23:47.
First working version of re-squared -> point-particle.
18c3220ea2f8
·W. Michael Brown on May 23 2011, 21:45.

May 20 2011

Debugging re_squared -> lj.
2641eae9ec26
·W. Michael Brown on May 20 2011, 22:49.

May 19 2011

Merge branch 'master' of ssh://firefly9.ornl.gov/~/code/lammps
39c6c35d77bf
·W. Michael Brown on May 19 2011, 00:13.
Adding stuff for re-squared - lj interactions.
a567bcc823d2
·W. Michael Brown on May 19 2011, 00:12.

May 18 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6136 f3b2605a-c512-4ea7…
14a348470c19
·sjplimp on May 18 2011, 22:03.

May 17 2011

Adding lj_class2 files. Currently copy of lj/cut/coul/long.
91cadeacd99d
·W. Michael Brown on May 17 2011, 01:27.

May 16 2011

Added untested code for RE-squared/lj interactions.
95398f4b5f2b
·W. Michael Brown on May 16 2011, 21:52.

May 11 2011

Optimizing RE-squared.
6e48589b9b64
·W. Michael Brown on May 11 2011, 23:28.

May 10 2011

Working re_squared.
0ecefcd1ba64
·W. Michael Brown on May 10 2011, 22:38.
Finished a compilable re_squared kernel.
cc91f5326541
·W. Michael Brown on May 10 2011, 18:48.

May 9 2011

More work on re_squared kernel.
eb5ae89e3fcd
·W. Michael Brown on May 9 2011, 22:08.
Working on re-squared kernel.
b214af85590c
·W. Michael Brown on May 9 2011, 17:57.

May 8 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6079 f3b2605a-c512-4ea7…
02ed350cf682
·sjplimp on May 8 2011, 04:00.

May 6 2011

Starting on RE-squared.
5bd505c31eb9
·W. Michael Brown on May 6 2011, 20:13.
Adding LAMMPS_AL namespace to gb. Adding re_squared as a copy of gayberne.
a5e8df135629
·W. Michael Brown on May 6 2011, 18:11.
Bug fixes for change to base_ellipsoid.
89a7d638d2f8
·W. Michael Brown on May 6 2011, 17:50.
Adding missing files from last two commits.
2523a3aea6c0
·W. Michael Brown on May 6 2011, 17:01.
Renaming gayberne stuff more generic for ellipsoids.
3bd23ad0736a
·W. Michael Brown on May 6 2011, 04:16.
Renaming gay-berne files.
c28b28b8c81e
·W. Michael Brown on May 6 2011, 03:51.
Added a base class for ellipsoidal particles.
3bcf5ad6c955
·W. Michael Brown on May 6 2011, 03:21.

May 5 2011

Adding nbor->clear to destructors to prevent seg faults at end of runs.
8a504de9d0d3
·W. Michael Brown on May 5 2011, 03:27.

May 4 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6070 f3b2605a-c512-4ea7…
c91cf5f623b5
·sjplimp on May 4 2011, 18:27.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6069 f3b2605a-c512-4ea7…
bf6bb59386ca
·sjplimp on May 4 2011, 18:24.

May 3 2011

Merge ssh://lens.ccs.ornl.gov/~/git/lammps
6731b51d0a98
·W. Michael Brown on May 3 2011, 22:06.
Merge branch 'master' of http://git.icms.temple.edu/lammps-ro
afa3eeac0b21
·Mike Brown on May 3 2011, 22:03.

May 2 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6053 f3b2605a-c512-4ea7…
5f799182b382
·sjplimp on May 2 2011, 17:02.

Apr 29 2011

Changing the order of answer object destruction.
8e7b6470c7dd
·W. Michael Brown on Apr 29 2011, 18:22.

Apr 28 2011

No longer accumulating device times when procs_per_gpu>1.
6af4b5c644cd
·W. Michael Brown on Apr 28 2011, 03:34.
Revert "Changing the concurrent PPPM execution."
64320e52bb1f
·W. Michael Brown on Apr 28 2011, 01:02.

Apr 27 2011

Changing the concurrent PPPM execution.
b747b020314f
·W. Michael Brown on Apr 27 2011, 19:15.

Apr 16 2011

Changing erroneous BIO_PAIR in kernels to BLOCK_PAIR. Default threads per atom…
58bf89fda373
·W. Michael Brown on Apr 16 2011, 02:57.
Merge branch 'master' of http://git.icms.temple.edu/lammps-ro
95c322ef0319
·Mike Brown on Apr 16 2011, 01:19.

lammps/liblammm-devela6b7299ddc2b996353886ec…

Oct 8 2011

Sep 30 2011

Sep 24 2011

Sep 16 2011

Sep 14 2011

Sep 13 2011

Sep 12 2011

Sep 1 2011

Aug 31 2011

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Aug 8 2011

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Jul 27 2011

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Apr 16 2011

lammps/lib
lammm-devela6b7299ddc2b996353886ec…