Diffusion lammps (runner) History

History
runnera362ece3e7e195f14535393…

Dec 2 2011

fix timer->init() bug
a362ece3e7e1
·Axel Kohlmeyer on Dec 2 2011, 18:09.
Merge branch 'master' into openmp-master
9d162cd555bd
·Axel Kohlmeyer on Dec 2 2011, 17:52.

Dec 1 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7272 f3b2605a-c512-4ea7…
5a968ac62e01
·sjplimp on Dec 1 2011, 22:19.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7270 f3b2605a-c512-4ea7…
a6d0ca14cf51
·sjplimp on Dec 1 2011, 18:59.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7269 f3b2605a-c512-4ea7…
2ff6b10ce218
·sjplimp on Dec 1 2011, 18:57.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7268 f3b2605a-c512-4ea7…
dac5c0354dfa
·sjplimp on Dec 1 2011, 18:51.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7267 f3b2605a-c512-4ea7…
4643566b2519
·sjplimp on Dec 1 2011, 18:37.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7266 f3b2605a-c512-4ea7…
8c372f6c410d
·sjplimp on Dec 1 2011, 18:21.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7265 f3b2605a-c512-4ea7…
57a20c2706ce
·sjplimp on Dec 1 2011, 18:05.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7264 f3b2605a-c512-4ea7…
389584998643
·sjplimp on Dec 1 2011, 18:05.
include preprocessor updates from mike brown
6de5bb6200c7
·Axel Kohlmeyer on Dec 1 2011, 17:26.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7263 f3b2605a-c512-4ea7…
b3cd459ea9fb
·sjplimp on Dec 1 2011, 17:05.
Merge branch 'master' into openmp-master
21e591dba113
·Axel Kohlmeyer on Dec 1 2011, 16:48.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7262 f3b2605a-c512-4ea7…
ba728e5e07e1
·sjplimp on Dec 1 2011, 16:47.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7261 f3b2605a-c512-4ea7…
8f728e4823aa
·sjplimp on Dec 1 2011, 16:46.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7260 f3b2605a-c512-4ea7…
ade9c93d8beb
·sjplimp on Dec 1 2011, 16:38.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7259 f3b2605a-c512-4ea7…
d966083a3f0f
·sjplimp on Dec 1 2011, 16:36.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7258 f3b2605a-c512-4ea7…
596bff6b8737
·sjplimp on Dec 1 2011, 16:35.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7257 f3b2605a-c512-4ea7…
750c4b07bbde
·sjplimp on Dec 1 2011, 15:58.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7256 f3b2605a-c512-4ea7…
70a85bddfd2d
·sjplimp on Dec 1 2011, 15:58.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7255 f3b2605a-c512-4ea7…
d96b0ab866ae
·sjplimp on Dec 1 2011, 15:53.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7254 f3b2605a-c512-4ea7…
0dacc993ae27
·sjplimp on Dec 1 2011, 15:50.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7253 f3b2605a-c512-4ea7…
e2d5ab683f49
·sjplimp on Dec 1 2011, 15:50.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7252 f3b2605a-c512-4ea7…
badb8c439d8d
·sjplimp on Dec 1 2011, 15:45.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7251 f3b2605a-c512-4ea7…
b7f57f079dfd
·sjplimp on Dec 1 2011, 15:45.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7249 f3b2605a-c512-4ea7…
263875b6fd01
·sjplimp on Dec 1 2011, 01:20.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7248 f3b2605a-c512-4ea7…
1c808e707526
·sjplimp on Dec 1 2011, 01:19.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7247 f3b2605a-c512-4ea7…
f823c6e4fc2d
·sjplimp on Dec 1 2011, 01:19.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7245 f3b2605a-c512-4ea7…
68ddd409e158
·sjplimp on Dec 1 2011, 01:08.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7244 f3b2605a-c512-4ea7…
21c24459c92c
·sjplimp on Dec 1 2011, 01:08.

Nov 30 2011

Added settings for glory Intel v.11
4badd69f3ea5
·athomps on Nov 30 2011, 16:36.
update documentation for gauss/cut and coul/diel
179b1faaebd8
·Axel Kohlmeyer on Nov 30 2011, 01:56.
add missing line
31cdb2937798
·Axel Kohlmeyer on Nov 30 2011, 01:55.
port implicit package omp to clear command.
04a52667efad
·Axel Kohlmeyer on Nov 30 2011, 01:55.
Merge branch 'master' into openmp-master
f397ec383298
·Axel Kohlmeyer on Nov 30 2011, 00:49.
update documentation for renaming of cg/cmm to lj/sdk
28ae26a28f72
·Axel Kohlmeyer on Nov 30 2011, 00:36.
move lj/sdk potentials into USER-CG-CMM package
61622c72b37b
·Axel Kohlmeyer on Nov 30 2011, 00:17.

Nov 29 2011

neighbor list bugfix from mike brown
f7f40f503626
·Axel Kohlmeyer on Nov 29 2011, 03:48.

Nov 28 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7241 f3b2605a-c512-4ea7…
84bc16311e07
·sjplimp on Nov 28 2011, 23:55.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7240 f3b2605a-c512-4ea7…
6b3fd8f48f62
·sjplimp on Nov 28 2011, 23:53.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7238 f3b2605a-c512-4ea7…
afb76218387c
·sjplimp on Nov 28 2011, 23:46.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7237 f3b2605a-c512-4ea7…
5a158918de4e
·sjplimp on Nov 28 2011, 23:42.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7236 f3b2605a-c512-4ea7…
c032f772ac67
·sjplimp on Nov 28 2011, 23:41.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7235 f3b2605a-c512-4ea7…
33f77e2917e6
·sjplimp on Nov 28 2011, 18:47.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7234 f3b2605a-c512-4ea7…
f6c92890f1cc
·sjplimp on Nov 28 2011, 18:25.

Nov 21 2011

first stab at a regression test library
2d765b7caa4a
·Axel Kohlmeyer on Nov 21 2011, 02:14.

Nov 20 2011

Merge branch 'openmp-master' of github.com:akohlmey/lammps-omp into openmp…
f358b95cdf92
·Axel Kohlmeyer on Nov 20 2011, 21:24.

Nov 17 2011

Merge branch 'master' into openmp-master
0d5f2283b1c8
·Axel Kohlmeyer on Nov 17 2011, 18:37.

Nov 16 2011

Added doc for fix wall/piston and fix append/atoms
cf631219bc31
·athomps on Nov 16 2011, 19:35.
Modified error messages
8fb28ae020ea
·athomps on Nov 16 2011, 19:33.
Added doc for fix wall/piston and fix append/atoms
c0cface3942a
·athomps on Nov 16 2011, 19:04.

Nov 15 2011

include LAL bugfixes from mike brown for _DOUBLE_DOUBLE with OpenCL
91d8e872fe28
·Axel Kohlmeyer on Nov 15 2011, 02:05.
Merge branch 'openmp-master' of github.com:akohlmey/lammps-omp into openmp…
a925d868fa91
·Axel Kohlmeyer on Nov 15 2011, 01:59.

Nov 14 2011

revert to using preprocessor macros for MIN/MAX, since the templated inline…
ccd5c7b9a1c4
·Axel Kohlmeyer on Nov 14 2011, 23:55.
Merge branch 'master' into openmp-master
ad5e85a4bf32
·Axel Kohlmeyer on Nov 14 2011, 23:20.

Nov 12 2011

add test prohibiting use of USER-OMP styles with r-RESPA
b20b4a356cdc
·Axel Kohlmeyer on Nov 12 2011, 04:57.
prep for threaded fixes that may need to reduce forces
b0445c93b111
·Axel Kohlmeyer on Nov 12 2011, 02:58.
fix bug causing memory corruption with compute_rho1d_thr()
0dd5d15abab3
·Axel Kohlmeyer on Nov 12 2011, 02:57.

Nov 11 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7228 f3b2605a-c512-4ea7…
69b7787ff259
·sjplimp on Nov 11 2011, 17:52.

Nov 10 2011

Merge branch 'openmp-master' of github.com:akohlmey/lammps-omp into openmp…
0723de1e2f42
·Axel Kohlmeyer on Nov 10 2011, 19:53.
Merge branch 'master' into openmp-master
756940313d81
·Axel Kohlmeyer on Nov 10 2011, 16:30.
remove traces of GPU+thread support from GPU package
682d51a6d9e5
·Axel Kohlmeyer on Nov 10 2011, 16:29.

Nov 9 2011

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7226 f3b2605a-c512-4ea7…
189e650c6702
·sjplimp on Nov 9 2011, 16:09.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7225 f3b2605a-c512-4ea7…
0be567a00a70
·sjplimp on Nov 9 2011, 16:04.
remove redundant bugfix
9e9e85d103d3
·Axel Kohlmeyer on Nov 9 2011, 13:31.
Merge branch 'master' into openmp-master
0745f717d8db
·Axel Kohlmeyer on Nov 9 2011, 13:30.
add threaded versions of coul/diel and gauss/cut
45040c4fdd0a
·Axel Kohlmeyer on Nov 9 2011, 07:13.
bugfixes
fa66e183e360
·Axel Kohlmeyer on Nov 9 2011, 07:13.
make the processor grid info less confusing
feca20292aee
·Axel Kohlmeyer on Nov 9 2011, 06:06.
add gauss/cut and coul/diel for arben's implicit solvent
dc263fb4d988
·Axel Kohlmeyer on Nov 9 2011, 04:58.
use single precision FFT-2 for now
f9807b3ebf0c
·Axel Kohlmeyer on Nov 9 2011, 04:30.
remove threaded gpu style and update install script for cg/cmm lj/sdk rename
63dd17808d24
·Axel Kohlmeyer on Nov 9 2011, 04:30.
add backward compatibility with cg/cmm style
07e32b3836c9
·Axel Kohlmeyer on Nov 9 2011, 00:05.
fix bug that killed coulomb contributions
45f492e42b15
·Axel Kohlmeyer on Nov 9 2011, 00:04.
fix typo
fae31df039dc
·Axel Kohlmeyer on Nov 9 2011, 00:03.
cosmetic changes.
6c74091b2a54
·Axel Kohlmeyer on Nov 9 2011, 00:03.

Nov 8 2011

remove msm support from GPU library
2b6744cf6721
·Axel Kohlmeyer on Nov 8 2011, 22:57.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7223 f3b2605a-c512-4ea7…
1963ce87832a
·sjplimp on Nov 8 2011, 15:53.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7222 f3b2605a-c512-4ea7…
181c77d346ac
·sjplimp on Nov 8 2011, 15:51.
more files to ignore
0ce50309a42b
·Axel Kohlmeyer on Nov 8 2011, 02:55.
convert lj/sdk GPU styles to use the new CPU version
fb788f6a05f9
·Axel Kohlmeyer on Nov 8 2011, 02:54.
fix bug with coefficient parsing for sdk angles
ef385531fefa
·Axel Kohlmeyer on Nov 8 2011, 02:53.
rename cg/cmm to lj/sdk
0316e0bf9cc4
·Axel Kohlmeyer on Nov 8 2011, 02:52.
rename cg/cmm styles to the new lj/sdk names
3fb3dfa5478d
·Axel Kohlmeyer on Nov 8 2011, 01:32.
ignore vim swap files
660ff2308ff4
·Axel Kohlmeyer on Nov 8 2011, 01:13.
more files to ignore
023128d64ac7
·Axel Kohlmeyer on Nov 8 2011, 01:12.
complete implementation of angle/sdk and add multi-threaded version
45479a785a15
·Axel Kohlmeyer on Nov 8 2011, 01:12.
Merge branch 'libgpu-update' into openmp-step10
1c5de20564d6
·Axel Kohlmeyer on Nov 8 2011, 00:10.
add threaded version of lj/sdk/coul/long
1c5c03243501
·Axel Kohlmeyer on Nov 8 2011, 00:02.
bugfixes in lj/sdk potentials
8a0947a71879
·Axel Kohlmeyer on Nov 8 2011, 00:02.
fix bug in timer initialization
1109a4ec5eda
·Axel Kohlmeyer on Nov 8 2011, 00:01.

Nov 7 2011

fix typo in package makefile
320d2d478991
·Axel Kohlmeyer on Nov 7 2011, 21:48.
copy fermi settings to amd/cypress settings and make them active
2483f016484d
·Axel Kohlmeyer on Nov 7 2011, 00:37.

Nov 6 2011

update list of files/dirs to ignore
463d13d99b4a
·Axel Kohlmeyer on Nov 6 2011, 22:00.
files to ignore
255f2588089e
·Axel Kohlmeyer on Nov 6 2011, 21:59.
add example for compilation of OpenCL with nvidia
ed93f3af3d72
·Axel Kohlmeyer on Nov 6 2011, 21:58.
eliminate msm styles for now
c5ac2333f742
·Axel Kohlmeyer on Nov 6 2011, 21:57.
provide info for OpenCL compilation
c1aaa2c1bd5b
·Axel Kohlmeyer on Nov 6 2011, 21:45.
bugfix from mike brown
2f4836a100dd
·Axel Kohlmeyer on Nov 6 2011, 18:00.

Nov 5 2011

second part of the GPU update merge
f982ae2c2c68
·Axel Kohlmeyer on Nov 5 2011, 00:34.

Historyrunnera362ece3e7e195f14535393…

Dec 2 2011

Dec 1 2011

Nov 30 2011

Nov 29 2011

Nov 28 2011

Nov 21 2011

Nov 20 2011

Nov 17 2011

Nov 16 2011

Nov 15 2011

Nov 14 2011

Nov 12 2011

Nov 11 2011

Nov 10 2011

Nov 9 2011

Nov 8 2011

Nov 7 2011

Nov 6 2011

Nov 5 2011

History
runnera362ece3e7e195f14535393…