Diffusion MedCo Deployment (master) History

History
master0ba229b9dd312860cb4ad1f…

Nov 10 2017

add phpmyadmin
0ba229b9dd31
·mickmis on Nov 10 2017, 14:38.
fix dockerfile build errors
74abc4c0fdf1
·mickmis on Nov 10 2017, 14:05.
fix dockerfile build errors
e8b5c5d54bb1
·mickmis on Nov 10 2017, 14:00.
fix dockerfile build errors
379b2839d6b5
·mickmis on Nov 10 2017, 12:14.
fix dockerfile build errors
ba13f0a9d2e9
·mickmis on Nov 10 2017, 11:16.
fix i2b2-web permissions error
d8e885b9b156
·mickmis on Nov 10 2017, 11:07.
fix deployment dev-3nodes-samehost
42f9c6dac867
·mickmis on Nov 10 2017, 10:57.
update setup script
dbff328ae8b0
·mickmis on Nov 10 2017, 10:57.
move docker images to separate folder + some modifications in dockerfiles +…
b7e146a618af
·mickmis on Nov 10 2017, 10:56.
ignore CA updates
137824548cd2
·mickmis on Nov 10 2017, 09:56.
cleanup
9736190ceee9
·mickmis on Nov 10 2017, 09:53.

Nov 7 2017

rebuild webclient
44414a3e20c0
·mickmis on Nov 7 2017, 15:33.
rebuild webclient
b4cd25b098c0
·mickmis on Nov 7 2017, 15:09.
updated keys
352a395b4e80
·mickmis on Nov 7 2017, 13:53.
rebuild webclient
61c4f7da6dd9
·mickmis on Nov 7 2017, 13:03.
volume mounter into i2b2-web correctly
347c6b33614c
·mickmis on Nov 7 2017, 12:36.
add genomic terms in ontology
341601333458
·mickmis on Nov 7 2017, 12:33.
fix conf problem ssl lighttpd
fb09a9641254
·mickmis on Nov 7 2017, 12:33.
ligghtpd ssl
3e5bd6d87b07
·mickmis on Nov 7 2017, 11:50.
rebuild i2b2 web
292a7c6f500b
·mickmis on Nov 7 2017, 10:40.
rebuild i2b2 web
baddba55c3c1
·mickmis on Nov 7 2017, 10:29.

Nov 6 2017

rebuild webclient + add links
9b3e7484a776
·mickmis on Nov 6 2017, 20:48.
rebuild webclient
71f165ca2308
·mickmis on Nov 6 2017, 15:13.
rebuild i2b2-web + fix docker-compose mistake
74be4224e25d
·mickmis on Nov 6 2017, 14:27.
fix config folder
ded569ccb639
·mickmis on Nov 6 2017, 13:22.
fix dev profile
1a387aab3ec7
·mickmis on Nov 6 2017, 13:02.
add icclusters 3 nodes conf
7b3373369712
·mickmis on Nov 6 2017, 11:21.
add icclusters 3 nodes conf
9b34bc93c437
·mickmis on Nov 6 2017, 11:19.

Nov 3 2017

rebuild
30689c645415
·mickmis on Nov 3 2017, 16:05.
rebuild shrine webclient
608cd1cfaf24
·mickmis on Nov 3 2017, 11:08.
rebuild shrine
668a4f66ae01
·mickmis on Nov 3 2017, 09:45.

Nov 2 2017

rebuild shrine
479143c13557
·mickmis on Nov 2 2017, 22:48.
nocache
58495bb0f045
·mickmis on Nov 2 2017, 16:49.
shrine-webclient: integrate sql credentials from php with docker
6f414cd0cefc
·mickmis on Nov 2 2017, 12:43.

Nov 1 2017

shrine: remove webclient and fix tomcat admin login
5b28bf977a33
·mickmis on Nov 1 2017, 21:36.
fix problem
962399f06785
·mickmis on Nov 1 2017, 19:59.
fix problem
1980d14aaa6c
·mickmis on Nov 1 2017, 19:46.
fix problem
1e39e079e50f
·mickmis on Nov 1 2017, 19:39.
fix problem
7f7c376bb2cb
·mickmis on Nov 1 2017, 19:34.
attempt at getting shrine client in php web server
4876cca6ee67
·mickmis on Nov 1 2017, 19:29.
split projects for user service
535777e3ffa2
·mickmis on Nov 1 2017, 19:27.
add service user to be used by shrine
43183c571784
·mickmis on Nov 1 2017, 16:43.
disable authorization steward
cdc175866d21
·mickmis on Nov 1 2017, 15:52.
try config diff. for steward
1a7379b699f0
·mickmis on Nov 1 2017, 15:12.
fix DB issues (upload_id
b6b5347eaeb7
·mickmis on Nov 1 2017, 10:51.
remove alias map configuration
e5ba7fccad60
·mickmis on Nov 1 2017, 10:51.

Oct 31 2017

fix db users projects + potentially topic approved
5cf2a1b532e1
·mickmis on Oct 31 2017, 21:56.
split into 2 users
143ed1417e0a
·mickmis on Oct 31 2017, 21:35.
i2b2 rebuild
b4568aee3c45
·mickmis on Oct 31 2017, 17:42.
i2b2 rebuild
21ae38e2d115
·mickmis on Oct 31 2017, 17:38.
ignore unlynx binary
6e103bb4fbdd
·mickmis on Oct 31 2017, 17:38.
trust model changed
e5699564587f
·mickmis on Oct 31 2017, 16:56.
keys another attempt
cd66ef9eaef8
·mickmis on Oct 31 2017, 13:55.
shrine version key
69efaba652b2
·mickmis on Oct 31 2017, 11:29.
shrine test case into account
03af0852a113
·mickmis on Oct 31 2017, 11:04.
add shrine test query support
b191a8b1bb29
·mickmis on Oct 31 2017, 10:37.

Oct 30 2017

fix conf
46d3ec3407a0
·mickmis on Oct 30 2017, 23:07.
cosmetic changes
4e0da3e4d0e7
·mickmis on Oct 30 2017, 22:30.
Revert "shrine configuration modifications"
0ae11f3decf3
·mickmis on Oct 30 2017, 22:25.
Revert "shrine configuration modifications"
c7e5cce9ddff
·mickmis on Oct 30 2017, 22:25.
shrine configuration modifications
7d3483df347b
·mickmis on Oct 30 2017, 22:00.
shrine configuration modifications
7dc1adc723c7
·mickmis on Oct 30 2017, 21:48.
attempt at fix
312372be9345
·mickmis on Oct 30 2017, 21:23.
attempt at fix
35461f95b9a9
·mickmis on Oct 30 2017, 20:34.
attempt at fix
9ea36ee94c82
·mickmis on Oct 30 2017, 19:28.
attempt at fix
01c859e91145
·mickmis on Oct 30 2017, 19:08.
temporary fix for niccolo
ed89c02e5f82
·mickmis on Oct 30 2017, 16:56.
temporary fix for niccolo
02d12da1c0fd
·mickmis on Oct 30 2017, 16:53.
add keystores
aa1d6895fbb8
·mickmis on Oct 30 2017, 16:29.
fix forgotten keystore path modfiication
50f3cf0dbc12
·mickmis on Oct 30 2017, 16:27.
fix forgotten keystore path modfiication
b25826a7294c
·mickmis on Oct 30 2017, 16:24.
fix forgotten keystore path modfiication
4d725b2ab5cb
·mickmis on Oct 30 2017, 16:18.
shrine: modify keys to have different keystores per nodes -- different way +…
54bd6a63c00c
·mickmis on Oct 30 2017, 16:13.
shrine docker: optimize caching
0be40d91b825
·mickmis on Oct 30 2017, 15:58.
shrine: modify keys to have different keystores per nodes
5428ea3a35c3
·mickmis on Oct 30 2017, 15:57.
fix another configuration ommited
a0a757a838cb
·mickmis on Oct 30 2017, 15:05.
fix new topic url in webclient
0c2ed21f2356
·mickmis on Oct 30 2017, 14:38.
added shrine users configuration
26a273c1444a
·mickmis on Oct 30 2017, 14:01.
update i2b2 database: pm data now manually loaded to have full medco data
b86d0b772911
·mickmis on Oct 30 2017, 10:54.

Oct 27 2017

disable steward in shrine configuration
233762ead402
·mickmis on Oct 27 2017, 16:21.
fix shrine server configuration
f3cdbdb3efbe
·mickmis on Oct 27 2017, 16:09.
Merge branch 'shrineintegration' of ssh://c4science.ch/source/medco-deployment…
2ee9781c2bf4
·mickmis on Oct 27 2017, 14:55.
add mandatory undocumented configuration aliasMap to shrine
192f390c67ca
·mickmis on Oct 27 2017, 14:54.
add mandatory undocumented configuration aliasMap to shrine
79fa4ba672af
·mickmis on Oct 27 2017, 11:32.
update shrine configuration (trust model>peer to peer)
8a4b6f3ca331
·mickmis on Oct 27 2017, 11:05.
fix shrine-server config file
5b86bafb133f
·mickmis on Oct 27 2017, 10:05.
fix database structure
087ea777418e
·mickmis on Oct 27 2017, 09:45.

Oct 26 2017

update shrine-database dockerfile
812ceefb27ec
·mickmis on Oct 26 2017, 18:17.
remove shrine-server patches, modify shrine sources instead
82e25c7a9b84
·mickmis on Oct 26 2017, 17:36.
fix ddl file with changed name
94312fe277a4
·mickmis on Oct 26 2017, 16:22.
fix shrine database init script
ba8c5b3daf8c
·mickmis on Oct 26 2017, 16:06.
fix shrine database initialization script
8be2faa271bd
·mickmis on Oct 26 2017, 15:34.
fix shrine dockerfile: configuration setup
a6bd063ca359
·mickmis on Oct 26 2017, 14:09.
fix variables syntax in config file
aaf3228b5a45
·mickmis on Oct 26 2017, 13:53.
docker compose profiles and configuration updates for shrine (only dev-3nodes…
b0261409dc47
·mickmis on Oct 26 2017, 10:14.
updates to docker definitions of i2b2 server, database, unlynx
9ab2d08b3a79
·mickmis on Oct 26 2017, 10:12.
docker definitions of shrine database and server
582fcee9a832
·mickmis on Oct 26 2017, 10:10.

Sep 22 2017

100x and 1000x experiments ; PL/pgSQL script to duplicate data
dee810945ff7
·mickmis on Sep 22 2017, 09:37.

Sep 21 2017

update adresses in key files
eda1591ca27e
·mickmis on Sep 21 2017, 11:25.

Sep 20 2017

experiments network traffic
82641c019d6f
·mickmis on Sep 20 2017, 19:15.

Historymaster0ba229b9dd312860cb4ad1f…

Nov 10 2017

Nov 7 2017

Nov 6 2017

Nov 3 2017

Nov 2 2017

Nov 1 2017

Oct 31 2017

Oct 30 2017

Oct 27 2017

Oct 26 2017

Sep 22 2017

Sep 21 2017

Sep 20 2017

History
master0ba229b9dd312860cb4ad1f…