Diffusion µSpectre (feat/mpi2) History

mpi216496ec3aafd5c40da6a235…

Apr 2 2018

MAINT: lengths->domain_lengths
dee904a5b960
·pastewka on Apr 2 2018, 21:18.
MAINT: resolutions->subdomain_resolutions, locations->subdomain_locations
204e58eff301
·pastewka on Apr 2 2018, 21:09.

Apr 1 2018

MAINT: Moved 'lengths' from FFTEngine to Projection
4a3e3cd7d8cf
·pastewka on Apr 1 2018, 22:22.

Mar 30 2018

ENH: MPI parallelization
656437418c7e
·D174
·pastewka on Mar 30 2018, 13:55.

Mar 22 2018

Implementation of a ProjectionError for even grids, need discussion
dad5c7939db6
·D168
·RLeute on Mar 22 2018, 16:58.

Mar 16 2018

ENH: First implementation of MPI parallelization.
acb656fa2706
·D169
·junge / pastewka on Mar 16 2018, 17:51.
WIP: Enabled and updated MPI parallel patch test.
679cc5d1e141
·pastewka on Mar 16 2018, 16:45.
WIP: get_index needs locations argument
c8689277da3a
·pastewka on Mar 16 2018, 13:35.

Mar 15 2018

WIP: de_geus solver converges
d10e89d0559c
·pastewka on Mar 15 2018, 22:19.
WIP: SolverCG appears to be working in parallel.
a2980762715b
·pastewka on Mar 15 2018, 22:12.

Mar 14 2018

WIP: Added missing locations argument.
82ece615f31c
·pastewka on Mar 14 2018, 22:52.
WIP: Cleaned up tests.
588d8ec12963
·pastewka on Mar 14 2018, 22:11.

Mar 13 2018

WIP: get_ccoord now rewuires a locations argument
f5b715ef4d96
·pastewka on Mar 13 2018, 22:30.
WIP: Replace public resize with explicit pad size information in FieldBase
b4cb16585ec0
·pastewka on Mar 13 2018, 08:36.
WIP: 0,0 grid locations resides on one of the MPI processes only.
47ee34680901
·pastewka on Mar 13 2018, 08:06.

Mar 11 2018

WIP: Added MPI projection tests.
7d0715fa3a89
·pastewka on Mar 11 2018, 15:03.
WIP: Switched MPI FFT test to FFTW.
52dd54d702df
·pastewka on Mar 11 2018, 14:46.

Mar 8 2018

WIP: Remove material dimension from FieldCollections in MPI test.
4c60859318c1
·pastewka on Mar 8 2018, 22:04.
Merge branch 'master' into feat/mpi
da031383b328
·pastewka on Mar 8 2018, 21:59.

Mar 7 2018

WIP: MPI FFT test compiles with PFFT. No passes yet.
226e73ee26b3
·pastewka on Mar 7 2018, 22:37.
WIP: Pass engine as template parameter to fixture.
9f12c77c8f3e
·pastewka on Mar 7 2018, 22:34.
Cleanup: FieldCollection template params and FFT engine class names
eabe0571c30f
·junge on Mar 7 2018, 21:25.
Renamed 'system' to 'cell'
a5fb8e631773
·junge on Mar 7 2018, 21:06.
WIP: µSpectre -> muSpectre
8b9802aff52a
·pastewka on Mar 7 2018, 20:39.
Merge branch 'master' into feat/internal_variables_T1831
7e681271d663
·junge on Mar 7 2018, 18:22.
MaterialHyperElastoPlastic1 is tested
bd957ecc8bea
·junge on Mar 7 2018, 16:36.
WIP: Need to compute size over all MPI processes.
db091a2cb915
·pastewka on Mar 7 2018, 14:20.
WIP: Have FFTWMPIEngine and tests use the abstracted communicator.
97d0f6555d13
·pastewka on Mar 7 2018, 14:12.
WIP: fftw_engine_mpi -> fftwmpi_engine
5bef87e106a1
·pastewka on Mar 7 2018, 12:57.
WIP: Added MPIContext singleton that takes care of initializing and tearing…
aa4e5de45421
·pastewka on Mar 7 2018, 12:54.
WIP: Separated MPI tests into their own executable.
3bed7073861b
·pastewka on Mar 7 2018, 12:40.
WIP: Refactoring; FFTWEngineMPI -> FFTWMPIEngine
ee2ccfcd7563
·pastewka on Mar 7 2018, 12:39.
found and fixed mishandled temporary in MaterialHyperElastoPlastic1
9ba60d3594e4
·junge on Mar 7 2018, 02:14.

Mar 6 2018

still writing tests for plastic material
d2cb3c0afe23
·junge on Mar 6 2018, 23:23.
WIP: First version of MPI FFTW test.
ab3be79af63e
·pastewka on Mar 6 2018, 22:31.
writing plastic material tests
0768940e9a0a
·junge on Mar 6 2018, 17:52.
Added StateField convenience functions (concludes T1902)
99f8679e6125
·junge on Mar 6 2018, 13:02.
Added StateField (T1902)
d3affecf925c
·junge on Mar 6 2018, 11:49.

Feb 27 2018

MaterialHyperElastoPlastic1 -> need for History Fields?
8af34878344f
·junge on Feb 27 2018, 18:09.

Feb 25 2018

start of MaterialHyperElastoPlastic tests and modulus conversions
4b578078d47c
·junge on Feb 25 2018, 18:07.

Feb 24 2018

Removed the FieldCollection alias
1fe880c12733
·D162
·junge on Feb 24 2018, 15:53.

Feb 22 2018

Efficient logm and const correctness bug in MaterialMuSpectre fixed
2f84baf3e899
·junge on Feb 22 2018, 17:36.
Compatibility with gcc 5.4
1d0dc43a82d1
·junge on Feb 22 2018, 11:00.

Feb 21 2018

Included a material with distribution of stiffness properties
aeb858290a83
·D161
·RLeute on Feb 21 2018, 16:47.

Feb 14 2018

Added efficient computation of matrix logaritm for hencky strain
89d9962b1ddc
·junge on Feb 14 2018, 10:56.

Feb 12 2018

Merge with feat/eigenstrain_T1830
87f5a158af50
·junge on Feb 12 2018, 00:29.

Feb 3 2018

Squashed commit with the setup of documentation:
f26b16ccc17b
·junge on Feb 3 2018, 02:04.

Jan 21 2018

streamlined the solver interface and added all Eigen solvers
84a3bfa99993
·junge on Jan 21 2018, 19:27.

Jan 19 2018

Replacing the cg by eigen's implementation is promising
d2def4796a54
·junge on Jan 19 2018, 17:47.
Inaccuracy in small strain still not found
5d0691f92a3f
·junge on Jan 19 2018, 02:21.
Projections compared 1 by 1.
2469c510e287
·junge on Jan 19 2018, 00:58.
confirmed comparison for small strain projections
b26bed971c61
·junge on Jan 19 2018, 00:38.

Jan 18 2018

confirmed comparison for finite strain projections
2a473b1926d0
·junge on Jan 18 2018, 23:41.
working on comparison between projections
6f1cdb4f63e4
·junge on Jan 18 2018, 17:52.
Started working on Projection checks
e324dbe246d5
·junge on Jan 18 2018, 02:27.
FFT_engine accuracy checks added to tests
94e2f83651aa
·junge on Jan 18 2018, 00:40.

Jan 17 2018

directional stiffness in small strain inconsistent with python ref
fb3a30f7d8f0
·junge on Jan 17 2018, 18:13.

Jan 16 2018

Inconsistency in small strain projection: mean() moves over time
36974c21367c
·junge on Jan 16 2018, 22:25.
Verified and fixed projection. Still conditional convergence
a8674aa8639c
·junge on Jan 16 2018, 18:16.
minor changes to make for the test suite. ready for merge into main
852b438f4941
·branch: feat/python-base
·junge on Jan 16 2018, 00:20.

Jan 15 2018

Python bindings reached first useable stage
eea5258d021e
·junge on Jan 15 2018, 17:51.
statically typed, dynamically sized field for python bindings
384b82a2dca1
·junge on Jan 15 2018, 15:08.
Fixed py memory corruption due to default move constructor of System
01f64a9f34bd
·junge on Jan 15 2018, 12:18.

Jan 14 2018

Added small-strain projection, tests do not yet pass
f07cfa2f1785
·junge on Jan 14 2018, 18:09.

Jan 12 2018

Found bug is small-strain shear patch test!
2e258df0940d
·junge on Jan 12 2018, 16:44.
Merge branch 'master' into feat/python-base
f6897ca750f3
·junge on Jan 12 2018, 14:29.

Jan 11 2018

cleanup clang ignored weffc++
e5f596d90b4e
·junge on Jan 11 2018, 15:23.
now works with gcc 5
5107cf61d85f
·junge on Jan 11 2018, 15:15.
work on python bindings. still very incomplete
a0f4aaca23e6
·junge on Jan 11 2018, 09:44.

Jan 9 2018

added python testing base
c420b2793bac
·junge on Jan 9 2018, 16:06.

Jan 8 2018

added GNU GPL text and cleaned up the file headers some
45f88ba2c8e4
·tag: v0.1
·junge on Jan 8 2018, 10:40.

Jan 7 2018

Small-strain patch test passes, yay!
73a44dd8a595
·junge on Jan 7 2018, 15:07.

Jan 5 2018

Now compiles also in clang 4 and 5
1fa724724806
·junge on Jan 5 2018, 16:32.

Jan 3 2018

rolled back change to strided fields, added striding tests
f49335d9fb9e
·junge on Jan 3 2018, 22:28.
intermediate mess, changing to strided fields
e8e9ce5f47c6
·junge on Jan 3 2018, 16:13.

Dec 30 2017

Solvers now consistent and yield same result as prototype
a6aaabbe301f
·junge on Dec 30 2017, 10:51.

Dec 25 2017

still bug in solver, bug fixed a const-correctness bug
a5e7efd534ef
·junge on Dec 25 2017, 17:30.

Dec 22 2017

bug in solver. is projection correct?
7d96cf2dcc39
·junge on Dec 22 2017, 15:39.

Dec 20 2017

put solver cg and test in place, tests not yet ready
61245bc39a2c
·junge on Dec 20 2017, 19:00.
started solver cg
31be66493707
·junge on Dec 20 2017, 14:27.

Dec 18 2017

system tested
70bb8dad49b9
·junge on Dec 18 2017, 14:36.

Dec 17 2017

system tests still don't pass
6f64b9318dc3
·junge on Dec 17 2017, 22:36.

Dec 15 2017

system factory added tests don't pass
580b74d3d634
·junge on Dec 15 2017, 16:57.

Dec 14 2017

wrote system_base, tests not yet ready.
1ae30e7ae997
·junge on Dec 14 2017, 17:46.

Dec 13 2017

Fast alternative projection for finite strains tested
1093901cde70
·junge on Dec 13 2017, 09:19.

Dec 12 2017

Added fast alternative, but tests fail
270eecffb471
·junge on Dec 12 2017, 16:57.
Projection for finite strain projects gradient on itself
7a6df6e5b6b6
·junge on Dec 12 2017, 15:47.

Dec 11 2017

completed tests for ccoord_operations, projection tests still buggy
bfa314ab2ddd
·junge on Dec 11 2017, 23:01.
fft_utils tested and functional
3398dd0c070a
·junge on Dec 11 2017, 21:25.
added physical size to projection & fft_freqs computations, untested
94791ba5ac6a
·junge on Dec 11 2017, 17:25.

Dec 8 2017

tests for gradient projection fail
642827c4e30f
·junge on Dec 8 2017, 16:55.

Dec 7 2017

started tests for the finite strain projection operator
ae3798cc466c
·junge on Dec 7 2017, 17:26.

Dec 6 2017

still sketching out projections
2698a195ecbd
·junge on Dec 6 2017, 18:05.

Dec 5 2017

fftw engine tested and functional
778994fe120d
·junge on Dec 5 2017, 22:18.
intermediate test fails
a6b5e026bc00
·junge on Dec 5 2017, 18:22.

Dec 3 2017

sketched out fftw_engine
8b1180ccf970
·junge on Dec 3 2017, 17:51.

Nov 30 2017

MaterialHyperelastic1 core use fully tested
1f24dca2c71c
·junge on Nov 30 2017, 15:06.
Still on isolated bug, but replaced boost::combine by akantu::zip
96e8df9d1b19
·junge on Nov 30 2017, 09:50.

Nov 29 2017

isolated bug: constitutive law with tangent has memory access prob
47429d41d2b8
·junge on Nov 29 2017, 23:32.
multiple additions; tests for materialhyperelastic1 not yet done
d8f259673da1
·junge on Nov 29 2017, 18:23.

muSpectre/testsfeat/mpi216496ec3aafd5c40da6a235…

Apr 2 2018

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muSpectre/tests
feat/mpi216496ec3aafd5c40da6a235…