Diffusion SHRINE MedCo Fork (feature/i2b2-merge-to-develop) History

i2b2-merge-to…1.21.0

May 17 2016

Update POMs with release version 1.21.0.
6779dd2d3eb1
·branch: release/1.21.0
·Catalyst Bamboo on May 17 2016, 22:05.

May 12 2016

Another try at getting better text for SHRINE-1484
bde71070baca
·David Walend on May 12 2016, 21:22.
Another try at getting better text for SHRINE-1484
9d892c177392
·David Walend on May 12 2016, 21:01.
Another try at getting better text for SHRINE-1484
7c651ea77a89
·David Walend on May 12 2016, 20:58.
Another try at better text for SHRINE-1484
39d318d64c74
·David Walend on May 12 2016, 20:31.
Another try at better text for SHRINE-1484
4fdbbf7cb712
·David Walend on May 12 2016, 20:03.
Trying for better text in SHRINE-1484
9bb9098238da
·David Walend on May 12 2016, 19:40.
See if I get a better message for SHRINE-1484
c63e2c788d4b
·David Walend on May 12 2016, 19:05.
Removing logging to learn about SHRINE-1492
564564fe16d3
·David Walend on May 12 2016, 18:51.
Probing to learn what for SHRINE-1492 is about
b9fc8bc1b2ec
·David Walend on May 12 2016, 18:20.
Possible hack for SHRINE-1484
03aabc24b265
·David Walend on May 12 2016, 17:41.

Mar 30 2016

Now logging problems when first creating an ErrorResponse. Fix for SHRINE-1409.
408dec668efd
·David Walend on Mar 30 2016, 18:17.
Now logging problems when first creating an ErrorResponse
e5cea54eed07
·David Walend on Mar 30 2016, 17:43.

Mar 17 2016

Removed logging for SHRINE-1377
eb668c28e49a
·David Walend on Mar 17 2016, 20:51.
Some understanding and maybe a fix for SHRINE-1377
6bfec45d6a47
·David Walend on Mar 17 2016, 16:51.
Added some logging to see what is going on
2f9190722c4a
·David Walend on Mar 17 2016, 16:02.

Mar 16 2016

Possibly a fix for SHRINE-1377 - QueryResults with ERRORs don't have result…
6c50f60966df
·David Walend on Mar 16 2016, 21:35.

Mar 14 2016

Overloaded toString in KeyStoreDescriptor to redact the password for SHRINE-1371
167d0df8cf68
·David Walend on Mar 14 2016, 21:29.

Mar 4 2016

Now transferring data between databases on shrine-dev
b6f766a02ebe
·David Walend on Mar 4 2016, 17:08.
Now getting data out of squyrrllle
9f495e94cc8f
·David Walend on Mar 4 2016, 15:08.

Mar 3 2016

Password handling for the data source creator
35991961cc84
·David Walend on Mar 3 2016, 20:17.
Bulk of the code for priming the previous queries table
5648e6caae51
·David Walend on Mar 3 2016, 19:36.

Mar 2 2016

Logging an exception instead of dumping it to the console
95116f8b62ee
·David Walend on Mar 2 2016, 21:35.

Feb 25 2016

Added a NotAuthenticatedProblem to report problems with authentication that…
1c3ea56d1424
·David Walend on Feb 25 2016, 21:27.
Hack to get an exception from the QEP
81211412c355
·David Walend on Feb 25 2016, 19:49.
Now authenticating everythign that happens in the QepService and…
bedefc0f6215
·David Walend on Feb 25 2016, 17:36.

Feb 24 2016

Added some possbily better explanation of the error for SHRINE-1285
4e5cd7678524
·David Walend on Feb 24 2016, 19:54.

Feb 23 2016

Got rid of ResultOutputType.PATIENTSET
87af747198fb
·David Walend on Feb 23 2016, 17:14.

Feb 22 2016

Better exception message for an IOException from Keystore trouble
533628928d57
·David Walend on Feb 22 2016, 18:48.
A little cleanup before dealing with sorting and fetch size
3996ee1ec6a5
·David Walend on Feb 22 2016, 16:56.

Feb 18 2016

Support for renaming and deleting queries
3f85e99a94aa
·David Walend on Feb 18 2016, 21:04.
Renaming before using in the db code
73feda32acaa
·David Walend on Feb 18 2016, 19:49.

Feb 17 2016

First attempt at round-trip db cache of results in the qep, and some more cruft…
2a4852b100db
·David Walend on Feb 17 2016, 17:57.
Got rid of some unused wierdly complex code
c8676bf4a66c
·David Walend on Feb 17 2016, 17:18.

Feb 16 2016

Prep work and a bit of logging before reading query results
f28f5f8754d0
·David Walend on Feb 16 2016, 21:48.

Feb 4 2016

Getting a QueryResult out of the db
1ea5937a612a
·David Walend on Feb 4 2016, 20:04.

Feb 2 2016

Another try at the network id
55d2b7bc9c78
·David Walend on Feb 2 2016, 22:18.
Think I found the network id
a9e82a82b430
·David Walend on Feb 2 2016, 21:31.
Removed some dead code, updated sql for the new table, and removed the…
c3c7d4df1d2f
·David Walend on Feb 2 2016, 21:02.
Matched fields in a QueryResult with fields in the database
0b4d7f6fa098
·David Walend on Feb 2 2016, 18:24.
Start of query result tables
b809ecd7759b
·David Walend on Feb 2 2016, 16:51.

Feb 1 2016

Deleted more PDO stuff
0b9ea42e31e7
·David Walend on Feb 1 2016, 17:26.

Jan 29 2016

Got rid of ReadPDORequest and associated bits
73bc2b1c8e06
·David Walend on Jan 29 2016, 22:24.
Planning out the next part of local/local
064b3b77cf6a
·David Walend on Jan 29 2016, 21:23.
Probing a bit into why the steward's actors aren't daemonic
5ae5189a064b
·David Walend on Jan 29 2016, 16:53.

Jan 28 2016

Another try at getting akka to run as all-daemon
3ef029060a95
·David Walend on Jan 28 2016, 22:29.
Removed stray columns from previousQueries
d6a2021af428
·David Walend on Jan 28 2016, 18:32.
Added logging to try to find where the message comes in
85fb775a3a20
·David Walend on Jan 28 2016, 15:58.

Jan 26 2016

Factored the JDNI/tomcat boilerplate off into its own class
5315849aa994
·David Walend on Jan 26 2016, 21:49.
Removing the parts that the QEP uses to ask adapters for previous queries
bfad2e33d56b
·David Walend on Jan 26 2016, 18:06.

Jan 25 2016

Guess for the right value of queryMasterid
b3ad90ab2ed9
·David Walend on Jan 25 2016, 22:20.

Jan 13 2016

Remove (unused) PCORI_AdapterMappings.xml file. This should make build/test a…
474f5d939b2e
·Keith Dwyer on Jan 13 2016, 21:16.

Jan 12 2016

Try sending the cert
10a6cae3528b
·David Walend on Jan 12 2016, 15:16.

Jan 7 2016

Commit of POSO stuff for Status
71c32e0c1e66
·Ben Carmen on Jan 7 2016, 17:36.

Jan 5 2016

Using cert serial numbers for dashboard-to-dashboard comms
213aeef1aa1c
·David Walend on Jan 5 2016, 18:34.

Dec 22 2015

Structure to support a custom auth
296a2e4283d6
·David Walend on Dec 22 2015, 20:13.

Nov 19 2015

Shrine-1114 error QueryResults must supply a Problem or a ProblemDigest
cf533cf14423
·David Walend on Nov 19 2015, 22:26.

Nov 10 2015

Broadcast message ids from xor'ed UUIDs. Fix for SHRINE-1057.
12c3fa5819ac
·David Walend on Nov 10 2015, 21:06.

Nov 9 2015

Don't create hubs by default. Shrine-1155.
f82aa131afe8
·David Walend on Nov 9 2015, 20:49.

Nov 3 2015

Merge branch 'release/1.20.0' into develop
5ed682f41d99
·David Walend on Nov 3 2015, 16:14.
Added NodeId to RemoteAdapterClient and strung it through the test code.
59908e29cff7
·David Walend on Nov 3 2015, 16:14.

Nov 2 2015

Merge branch 'release/1.20.0' into develop
b9b839bccba6
·David Walend on Nov 2 2015, 20:53.
Now trapping an UnknownHostException in the Hub. Fix for SHRINE-1220.
d136b21949c4
·David Walend on Nov 2 2015, 20:52.
Merge branch 'release/1.20.0' into develop
8c78d44ca61f
·David Walend on Nov 2 2015, 17:53.
Fix for 1222 to see what the source of an unencountered problem is
9cdbaee5b344
·David Walend on Nov 2 2015, 17:53.

Oct 27 2015

Changed condition to create a hub at a node from presence of a hub config…
f2f9df80df31
·David Walend on Oct 27 2015, 17:16.
Updated to 1.21.0-SNAPSHOT. develop is open for 1.21
1f67119693f8
·David Walend on Oct 27 2015, 15:26.

Oct 22 2015

Got rid of IP address in many places
a155b88a247e
·David Walend on Oct 22 2015, 22:38.
Updated problem text with Bill.
979b3608257b
·David Walend on Oct 22 2015, 17:42.

Oct 16 2015

SHRINE-1052 now using create boolean config values to signal when to create a…
be357e0f2736
·David Walend on Oct 16 2015, 22:22.

Oct 15 2015

Updated language to match the wiki
2459fe1cd485
·David Walend on Oct 15 2015, 21:27.
Changed details to an xml element, which seems to carry through everything as…
c3a063dff576
·David Walend on Oct 15 2015, 17:21.

Oct 14 2015

Better xml for stack traces
319b34e431de
·David Walend on Oct 14 2015, 22:41.
Added time and place stamp (and stack trace xml) to the problem digest
161cc7583606
·David Walend on Oct 14 2015, 22:26.
Renamed the config section from admin to dashboard, and found some more admin…
c48dfdef595a
·David Walend on Oct 14 2015, 17:27.

Oct 13 2015

Fixed a minor bug with connect exceptions, and updated some more text while…
81c0255a02b8
·David Walend on Oct 13 2015, 22:23.
Updated a lot of parts of Problems
9bea78dd1ff6
·David Walend on Oct 13 2015, 18:51.

Oct 9 2015

Replaced the println to log a warning
7fc2413e77ab
·David Walend on Oct 9 2015, 20:23.
Renamed the generic problem to ProblemNotYetEncoded
cbda89e8c3a6
·David Walend on Oct 9 2015, 17:43.

Oct 8 2015

Added some error handing while tracking down a keystore config problem.
1c719a06cd33
·David Walend on Oct 8 2015, 20:08.
Added CouldNotParseResultsProblem and HttpErrorResponseProblem
8a4e49d64995
·David Walend on Oct 8 2015, 17:43.

Oct 7 2015

Changes to hopefully get the problem digest all the way through
6ca273615419
·David Walend on Oct 7 2015, 19:52.
Removed the require() because blank fields are OK.
29902405f5e3
·David Walend on Oct 7 2015, 17:13.
A little cleanup of Problem
68886afeb467
·David Walend on Oct 7 2015, 16:41.

Oct 6 2015

Got changes to ErrorResponse compiling
44a18e69a78e
·David Walend on Oct 6 2015, 20:12.

Oct 1 2015

Propagated the change into some db code and got a successful build
65152e457b7d
·David Walend on Oct 1 2015, 22:33.

Sep 30 2015

Changed the error query result to take an optional Problem, provide a default…
8b471cb2654f
·David Walend on Sep 30 2015, 20:30.

Sep 29 2015

removed some stray printlns)
1d6d7c5ff2f5
·David Walend on Sep 29 2015, 19:57.
Tweaked argument order to make more sense
0ddbed40338f
·David Walend on Sep 29 2015, 19:14.
Got xml and i2b2 flows working for ProblemDigest in QueryResult
db5b816ee751
·David Walend on Sep 29 2015, 18:05.
Added test of i2b2 xml
f8a05cbd0759
·David Walend on Sep 29 2015, 16:40.

Sep 28 2015

Got a None for ProblemDigest working with QueryResult
d9ddb13f2fd3
·David Walend on Sep 28 2015, 22:47.
Added XML processing for ProblemDigest, optional ProblemDigest parameter for…
c1bef85c2730
·David Walend on Sep 28 2015, 21:31.
Added ProblemDigest
46b614a6fa8e
·David Walend on Sep 28 2015, 20:46.

Sep 25 2015

Test contents for an error - see if they flow all the way through
b5b5283ce163
·David Walend on Sep 25 2015, 18:22.

Sep 23 2015

Test of adding extra xml
a309ca32f76c
·David Walend on Sep 23 2015, 22:18.
Little cleanup things while exploring code
2205c9b63be2
·David Walend on Sep 23 2015, 17:45.

Sep 21 2015

Added some logging and (perhaps) propper error handling to…
c6d887f5279b
·David Walend on Sep 21 2015, 20:10.
Added test of problem handler
0c73feeb9b34
·David Walend on Sep 21 2015, 17:32.

Sep 9 2015

All run query requests should have a usable ID after construnction.
ba7741f56dc4
·David Walend on Sep 9 2015, 22:29.

shrine-medco/commonsfeature/i2b2-merge-to…1.21.0

May 17 2016

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shrine-medco/commons
feature/i2b2-merge-to…1.21.0