Diffusion SHRINE MedCo Fork (master) History

src
masterf2b3826d37ddd8f03e544ce…

May 30 2017

Removing the old combined ddl files for SHRINE-2065
e0465830b185
·David Walend on May 30 2017, 20:56.

May 17 2017

Harvard head of IT security asked us to purge default i2b2 password. SHRINE-2067
e92c2f29419d
·David Walend on May 17 2017, 23:16.

May 16 2017

Created separate ddl files for shrine_query_history and adapterAuditDB as step…
107a830bdd2d
·David Walend on May 16 2017, 21:26.

Apr 28 2017

Main of a tool to create fake query results to test the previous query table.
db4f7a91d820
·David Walend on Apr 28 2017, 15:41.

Jan 10 2017

Most important part of SHRINE-1660
947fe34abddd
·David Walend on Jan 10 2017, 16:06.
Most important part of SHRINE-1660
1c09fb1bc17b
·David Walend on Jan 10 2017, 16:02.

Jan 5 2017

Merge branch 'develop' of https://open.med.harvard.edu/stash/scm/shrine/shrine…
cb8e71d04586
·David Walend on Jan 5 2017, 22:50.
Test xml for the data admin
aa37ad9e8ea9
·David Walend on Jan 5 2017, 22:49.

Dec 15 2016

Nich's original message for SHRINE-1635
dc252abeeb0d
·David Walend on Dec 15 2016, 18:03.

Dec 12 2016

Missing semicolons
84f4225330ff
·David Walend on Dec 12 2016, 16:33.

Nov 23 2016

got rid of attempt to handle browser requests to adapter/requests
d326a4ea1160
·Ty on Nov 23 2016, 20:16.
qep url fix, testing broadcaster url fix
f830558696d0
·Ty on Nov 23 2016, 19:58.

Nov 18 2016

sql commands to change the oracle flag_message field to a CLOB SHRINE-1731
4f567473f13a
·David Walend on Nov 18 2016, 19:10.

Nov 17 2016

More oracle work for SHRINE-1749
e853ade41533
·David Walend on Nov 17 2016, 19:49.
Trying to update db scripts for SHRINE-1749
3760bbf8ccaf
·David Walend on Nov 17 2016, 18:13.

Nov 15 2016

A lot of one-line changes consolidating ConfigSource implementations into just…
a8a07235bd05
·David Walend on Nov 15 2016, 18:28.

Nov 10 2016

renamed crypto2 to crypto
8d5ac9ce1a5e
·Ty on Nov 10 2016, 19:57.
removed import
5ad3015c322f
·Ty on Nov 10 2016, 18:31.
deleted old crypto
f034bed10311
·Ty on Nov 10 2016, 18:16.

Nov 7 2016

Merge branch 'develop' of https://open.med.harvard.edu/stash/scm/shrine/shrine…
5c7637a87679
·Ty on Nov 7 2016, 22:34.
Schema updates for mssql and mysql for SHRINE-1731
fcd6d0d4d95f
·David Walend on Nov 7 2016, 20:41.

Nov 3 2016

completely replaced the old crypto module. To remove it completely, will need…
e90613ca423e
·Ty on Nov 3 2016, 18:51.
fixes to signing/verifying, test fixes
b932130e92e8
·Ty on Nov 3 2016, 05:12.

Oct 13 2016

dug the modified date out of the class path for mappings file
b3ea22479ce2
·Ty on Oct 13 2016, 16:48.

Oct 7 2016

Merge branch 'develop' of https://open.med.harvard.edu/stash/scm/shrine/shrine…
9562909834e4
·David Walend on Oct 7 2016, 21:18.
Added a comment about the bounds of obfuscation
2d39d6dbc951
·David Walend on Oct 7 2016, 21:17.
Merge branch 'develop' of https://open.med.harvard.edu/stash/scm/shrine/shrine…
45e08dbe92ac
·Ty on Oct 7 2016, 17:09.
Change to throw a ConfigError on parsing incorrect objects from config
9c5c81272a55
·Ty on Oct 7 2016, 17:08.

Oct 6 2016

Quick fix for a test bug in SHRINE-1714
6f4a465cb2c1
·David Walend on Oct 6 2016, 18:36.

Oct 5 2016

More for SHRINE-1714, tests for small and smallish results.
ed462ed32892
·David Walend on Oct 5 2016, 21:27.

Oct 4 2016

More for SHRINE-1714, better behavior for small results.
75e56789a08b
·David Walend on Oct 4 2016, 22:05.
Possible fix for SHRINE-1689
c62a028c02d9
·David Walend on Oct 4 2016, 19:59.
First step of fixing SHRINE-1714
6e9fcf61a018
·David Walend on Oct 4 2016, 17:57.

Oct 3 2016

rewired the Dashboard to use the Status backend
c055b3789ed1
·Ty on Oct 3 2016, 21:53.

Sep 28 2016

Fix for SHRINE-1684 - typo in obfuscation
6c457a4bedd4
·David Walend on Sep 28 2016, 16:45.

Sep 15 2016

More logging for SHRINE-1546
bd3ea25a98c9
·David Walend on Sep 15 2016, 18:10.
Added a bit of logging
7b3e29d4f544
·David Walend on Sep 15 2016, 18:01.

Sep 14 2016

Configurable obfuscation, SHRINE-1546
2b47beaab25f
·David Walend on Sep 14 2016, 21:23.

Sep 13 2016

switched configs to use shrine.conf
ceefcb24e134
·Ty on Sep 13 2016, 20:23.

Sep 8 2016

Fix for SHRINE-1545, mostly adding comments and a default value to a reference.
f1440ecd0bdc
·David Walend on Sep 8 2016, 21:58.

Sep 7 2016

Better text for SHRINE-1544
14c63ce983e4
·David Walend on Sep 7 2016, 22:23.
Fencepost problem while fixing SHRINE-1544
a2b4e8d73134
·David Walend on Sep 7 2016, 22:04.
Pulling along the exception for bot defense, to get all the gritty details.
664880f59ec9
·David Walend on Sep 7 2016, 21:28.

Sep 6 2016

Merge branch 'develop' of https://open.med.harvard.edu/stash/scm/shrine/shrine…
6ac899021c49
·David Walend on Sep 6 2016, 22:24.
Loading bot detection thresholds from reference.conf
ba4a8fa6ed8c
·David Walend on Sep 6 2016, 22:24.

Sep 2 2016

reverting shrine_histroy changes
3d10670a4031
·Ty on Sep 2 2016, 21:28.

Aug 31 2016

updated conf files
b8e6c4167cb6
·Ty on Aug 31 2016, 15:46.

Aug 26 2016

refactored delayedInit
2f54aea4a4c4
·Ty on Aug 26 2016, 22:34.
a little cleanup for SHRINE-1544
8454095b83e5
·David Walend on Aug 26 2016, 16:34.
bot detector now works with empty maps for SHRINE-1544
7a638c79a7ac
·David Walend on Aug 26 2016, 16:32.

Aug 18 2016

Chagned oracle queryResults.statusMessage and problems.summary to CLOBs for…
8dd7383af2c2
·David Walend on Aug 18 2016, 21:38.

Aug 17 2016

turn off connector added back to tests
477a28e31e84
·Ty on Aug 17 2016, 17:13.

Aug 16 2016

Merge branch 'develop' of https://open.med.harvard.edu/stash/scm/shrine/shrine…
ca6fae4b0808
·Ty on Aug 16 2016, 18:14.
ddl changes
b1d1383bfdd5
·Ty on Aug 16 2016, 18:14.

Aug 12 2016

Merge branch 'develop' of https://open.med.harvard.edu/stash/scm/shrine/shrine…
a4d4ae16375b
·David Walend on Aug 12 2016, 20:15.
Better names for problems in SHRINE-1567
84168789d2fd
·David Walend on Aug 12 2016, 20:15.
Added two new problems and traps for incomplete-due-to-errors breakdown results…
a61317376d34
·David Walend on Aug 12 2016, 19:58.

Aug 9 2016

removed some unnecessary debugging
cf3d5ece4070
·Ty on Aug 9 2016, 20:48.

Aug 8 2016

Rename net.shrine.protocol.Failure to FailureResult
913dc186fe31
·David Walend on Aug 8 2016, 21:14.

Aug 5 2016

reset mysql.ddl, added varchar(max) to mssql.ddl, added clob to oracle.ddl
11891ae9e8a6
·Ty on Aug 5 2016, 16:32.
Further testing of ddl hypothesis
ed6bf09e2626
·Ty on Aug 5 2016, 16:00.
Further testing mysql.ddl hypothesis
42f903655edf
·Ty on Aug 5 2016, 15:40.
testing to see if oracle/mssql are using mysql.ddl
eb212a5cf6f9
·Ty on Aug 5 2016, 15:05.

Aug 2 2016

changed how problems override Abstract Problem, using lazy vals instead of vals
229ee91b9d0e
·Ty on Aug 2 2016, 20:32.

Jul 29 2016

alterted ddls
ed1a5582c105
·Ty on Jul 29 2016, 21:37.
TurnOffConnector to more test class
f0e68e2056a9
·Ty on Jul 29 2016, 17:29.

Jul 28 2016

Chagned get url, moved problems to data-commons
a384fbafb8eb
·Ty on Jul 28 2016, 20:57.

Jun 1 2016

Split out the adapter json for the status service for SHRINE-1495
070a2f44b812
·David Walend on Jun 1 2016, 21:23.

May 11 2016

Separated AdapterComponents into its own class off in the adapter package for…
cef5ed0ad333
·David Walend on May 11 2016, 17:56.

May 10 2016

Merge branch 'release/1.21.0' into develop
117a696a7ec9
·David Walend on May 10 2016, 21:32.

May 9 2016

Moved inner classes out to fix URL for SHRINE-1491
ac5958d42f24
·David Walend on May 9 2016, 16:30.

Apr 5 2016

Fix syntax errors in adapter.sql (for ERROR_RESULT table)
85ab8ee5334b
·Keith Dwyer on Apr 5 2016, 21:32.

Apr 4 2016

Fix syntax errors in adapter.sql (for ERROR_RESULT table)
254038708f59
·Keith Dwyer on Apr 4 2016, 18:59.

Mar 30 2016

Last of the fixes for SHRINE-1113 updated all the test code and removed the old…
963eb3d73c31
·David Walend on Mar 30 2016, 17:34.

Mar 14 2016

HeldQueries.scala now uses a QueryNotFound problem for SHRINE-1113
83394472a982
·David Walend on Mar 14 2016, 16:52.
Added UnknownRequestType for SHRINE-1113
1c8e3352366e
·David Walend on Mar 14 2016, 16:51.
Using real problems in AbstractReadQueryResultAdapter.scala for SHRINE-1113
4fb257395910
·David Walend on Mar 14 2016, 16:33.

Mar 11 2016

Removed hasBeenRun from ShrineQuery
4ea6697aeb36
·David Walend on Mar 11 2016, 21:51.
Removed held field from QueryMaster.
3d57ca1786f0
·David Walend on Mar 11 2016, 20:55.

Mar 4 2016

Fix for SHRINE-1327 - now handles a bad slick driver for microsoft
3ab85ca84aef
·David Walend on Mar 4 2016, 19:45.
Now getting data out of squyrrllle
9f495e94cc8f
·David Walend on Mar 4 2016, 15:08.

Mar 3 2016

Bulk of the code for priming the previous queries table
5648e6caae51
·David Walend on Mar 3 2016, 19:36.

Mar 1 2016

lockout privleged user threshold can be null in the database, will use the…
b3e11af4b670
·David Walend on Mar 1 2016, 18:23.
Made threshold optional (in code to see what breaks on shrine-dev)
7f8d6c2a4434
·David Walend on Mar 1 2016, 17:45.

Feb 24 2016

Added some possbily better explanation of the error for SHRINE-1285
4e5cd7678524
·David Walend on Feb 24 2016, 19:54.

Feb 22 2016

A little cleanup before dealing with sorting and fetch size
3996ee1ec6a5
·David Walend on Feb 22 2016, 16:56.

Feb 18 2016

Support for renaming and deleting queries
3f85e99a94aa
·David Walend on Feb 18 2016, 21:04.
Renaming before using in the db code
73feda32acaa
·David Walend on Feb 18 2016, 19:49.

Jan 29 2016

Got rid of ReadPDORequest and associated bits
73bc2b1c8e06
·David Walend on Jan 29 2016, 22:24.

Jan 26 2016

Factored the JDNI/tomcat boilerplate off into its own class
5315849aa994
·David Walend on Jan 26 2016, 21:49.
Removing the parts that the QEP uses to ask adapters for previous queries
bfad2e33d56b
·David Walend on Jan 26 2016, 18:06.

Jan 20 2016

cleaned up a lot of dead sql code. SHRINE-1263
87fdce25c99e
·David Walend on Jan 20 2016, 22:26.
Moving sql scripts
69fb78df0401
·David Walend on Jan 20 2016, 22:05.

Dec 15 2015

Fix for count=1 lockout bug, Shrine-1230
29ac7995aaab
·David Walend on Dec 15 2015, 15:59.

Dec 2 2015

Added default values to new columns
02ffa58dfb4a
·David Walend on Dec 2 2015, 21:36.

Nov 19 2015

Shrine-1114 error QueryResults must supply a Problem or a ProblemDigest
cf533cf14423
·David Walend on Nov 19 2015, 22:26.
Tweaking language a bit
569261d7a665
·David Walend on Nov 19 2015, 21:13.
SHRINE-1250 SqlException making it out to the top layer of the adapter needs a…
dd01c2e132d6
·David Walend on Nov 19 2015, 20:55.
SHRINE-1253 fix. Better error capture for junk xml from the CRC.
11d3bed18fff
·David Walend on Nov 19 2015, 16:54.

Nov 18 2015

straightening out the ddl
7a6e225ef0a9
·David Walend on Nov 18 2015, 21:31.

shrine-medco/adapter/adapter-service/srcmasterf2b3826d37ddd8f03e544ce…

May 30 2017

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shrine-medco/adapter/adapter-service/src
masterf2b3826d37ddd8f03e544ce…