Diffusion SHRINE MedCo Fork (master) History

shrine-medco/qep/service/src
master785f33263393775d508c284…

Sep 8 2017

Created json envelope for all SHRINE 1.23 messages. Filled in isCompleted.
785f33263393
·David Walend on Sep 8 2017, 21:40.

Sep 7 2017

Plans for statuses in SHRINE-2148 and the start of envelopes for SHRINE-2177
d5100ce6fff1
·David Walend on Sep 7 2017, 19:08.

Sep 5 2017

Fix for SHRINE-2149 - no longer writing the hub's web API reply to the QEP's…
d646aebe6dd9
·David Walend on Sep 5 2017, 17:08.

Aug 24 2017

added detach and blocking
df369c51a0e9
·yifan xing on Aug 24 2017, 21:01.

Aug 17 2017

Put NodeId into the QEP and into every RunQueryRequest it sends for SHRINE-2174
d86c95a0ebff
·David Walend on Aug 17 2017, 22:15.

Aug 14 2017

Added a scheduled cleanup of the notification Map every 5 minutes. SHRINE-2145
49e53dfd49a9
·David Walend on Aug 14 2017, 18:02.

Aug 13 2017

Extracted QepQueryDbChangeNotifier into a singleton where other parts of SHRINE…
b1977c6de01a
·David Walend on Aug 13 2017, 05:26.

Aug 7 2017

Merge pull request #15 in SHRINE/shrine from feature/SHRINE-2140-quickly-return…
cf8e7f2f363f
·David Walend on Aug 7 2017, 20:14.
Added a comment to pin down just what queryHub does.
e33082ad98ff
·David Walend on Aug 7 2017, 20:12.

Aug 4 2017

Got breakdowns into a structure to deliver for SHRINE-2150
b4c47c9d13f2
·David Walend on Aug 4 2017, 22:14.

Aug 3 2017

Merge branch 'develop' into feature/SHRINE-2140-quickly-return-the-network-query
9ea8edcc1c0b
·David Walend on Aug 3 2017, 20:34.
Added problem recording for SHRINE-2140
faaefafae229
·David Walend on Aug 3 2017, 20:07.
AbstractQepService no longer waits for a response from the hub before replying…
47c757c0380d
·David Walend on Aug 3 2017, 17:39.

Aug 2 2017

Assembles a new, result-free reply for SHRINE-2140
f47bff5d7d77
·David Walend on Aug 2 2017, 21:05.

Aug 1 2017

First step of SHRINE-2140. I'm able to change the statusTypeName element in the…
10ae225a0cc9
·David Walend on Aug 1 2017, 21:54.
Main body of work for SHRINE-2141 . I added new web API and database calls to…
a896ddb92350
·David Walend on Aug 1 2017, 17:38.

Jul 13 2017

Fix for SHRINE-1455 - default value of authorizationType from a reference.conf
521fe95cc682
·David Walend on Jul 13 2017, 22:38.

Jul 11 2017

Database indexing to speed up previous queries for SHRINE-2084.
5fe2d958b260
·David Walend on Jul 11 2017, 21:09.

Jun 30 2017

Cleaning up some todos before mothballing SHRINE-2055
5e347575f087
·David Walend on Jun 30 2017, 17:54.

May 22 2017

Added row count and offset to ResultsTable for SHRINE-2072
b40f08975a64
·David Walend on May 22 2017, 21:52.

May 2 2017

networkIds as strings for SHRINE-2029
ad8d71e09b7c
·David Walend on May 2 2017, 18:04.

Apr 21 2017

Made trustModelIsHub = true the default in a new reference.conf for SHRINE-1957
3c0ac219a7dd
·David Walend on Apr 21 2017, 22:21.

Apr 7 2017

Logging in the database layer to debug why it is so slow
f97ae384453e
·David Walend on Apr 7 2017, 19:28.

Apr 5 2017

Code changes to get data flowing for SHRINE-1963
df5b3b56fa8e
·David Walend on Apr 5 2017, 21:06.

Apr 4 2017

DB changes to support previous queries view (for now) SHRINE-1963
6284d1140170
·David Walend on Apr 4 2017, 21:48.

Feb 7 2017

small sql optimization
567e3618077d
·Ty on Feb 7 2017, 18:35.

Feb 1 2017

moved json structures, finished first draft
05b0bbccd695
·Ty on Feb 1 2017, 19:34.

Jan 31 2017

further work on query json structures
c453486b5556
·Ty on Jan 31 2017, 22:43.
fixed json structures
4f9ab3ff58b8
·Ty on Jan 31 2017, 22:14.
first draft of json structure implementations
f109100dff3a
·Ty on Jan 31 2017, 21:42.

Jan 13 2017

Fix for SHRINE-1843
cc35b9c156d1
·David Walend on Jan 13 2017, 18:00.

Jan 5 2017

Test xml for the data admin
aa37ad9e8ea9
·David Walend on Jan 5 2017, 22:49.

Nov 15 2016

A lot of one-line changes consolidating ConfigSource implementations into just…
a8a07235bd05
·David Walend on Nov 15 2016, 18:28.

Nov 10 2016

renamed crypto2 to crypto
8d5ac9ce1a5e
·Ty on Nov 10 2016, 19:57.
deleted old crypto
f034bed10311
·Ty on Nov 10 2016, 18:16.

Nov 7 2016

updated keystore parser, need to fix client
1e4e0c5afb8d
·Ty on Nov 7 2016, 05:33.

Nov 3 2016

fixes to signing/verifying, test fixes
b932130e92e8
·Ty on Nov 3 2016, 05:12.

Oct 28 2016

Error handling upon constructing from keystore file
5adbff9b56a3
·Ty on Oct 28 2016, 22:48.

Oct 19 2016

initial setup of verifying cross site signatures
403a1aace839
·Ty on Oct 19 2016, 21:58.

Oct 14 2016

summary fix, qep trustModel, testing changes, various style changes
7541b470f1ff
·Ty on Oct 14 2016, 18:36.

Oct 7 2016

Merge branch 'develop' of https://open.med.harvard.edu/stash/scm/shrine/shrine…
45e08dbe92ac
·Ty on Oct 7 2016, 17:09.
Change to throw a ConfigError on parsing incorrect objects from config
9c5c81272a55
·Ty on Oct 7 2016, 17:08.

Oct 6 2016

Fix for SHRINE-1644 - better error message when a delete query request has a…
56e8ed449899
·David Walend on Oct 6 2016, 18:04.

Oct 3 2016

rewired the Dashboard to use the Status backend
c055b3789ed1
·Ty on Oct 3 2016, 21:53.

Sep 6 2016

Needs Warmup Trait, beginning of Bootstrap visualization for dashboard
d34faaa42f78
·Ty on Sep 6 2016, 22:33.

Aug 26 2016

refactored delayedInit
2f54aea4a4c4
·Ty on Aug 26 2016, 22:34.

Aug 18 2016

Chagned oracle queryResults.statusMessage and problems.summary to CLOBs for…
8dd7383af2c2
·David Walend on Aug 18 2016, 21:38.

Aug 17 2016

turn off connector added back to tests
477a28e31e84
·Ty on Aug 17 2016, 17:13.

Aug 16 2016

Merge branch 'develop' of https://open.med.harvard.edu/stash/scm/shrine/shrine…
ca6fae4b0808
·Ty on Aug 16 2016, 18:14.

Aug 15 2016

moved problem into util
c596cfdb80f6
·Ty on Aug 15 2016, 17:56.

Aug 12 2016

Added two new problems and traps for incomplete-due-to-errors breakdown results…
a61317376d34
·David Walend on Aug 12 2016, 19:58.

Aug 2 2016

changed how problems override Abstract Problem, using lazy vals instead of vals
229ee91b9d0e
·Ty on Aug 2 2016, 20:32.

Jul 28 2016

Chagned get url, moved problems to data-commons
a384fbafb8eb
·Ty on Jul 28 2016, 20:57.

Jul 22 2016

Finally figured out how to serialize NodeSeq
50b529562967
·Ty on Jul 22 2016, 22:53.
Factored out config sources, Hopefully not too much
a5417d56f0e1
·Ty on Jul 22 2016, 19:58.
First half of code review refactoring (epoch added to Problems)
9017f31ccbad
·Ty on Jul 22 2016, 18:01.

Jun 16 2016

Testing optional parts and i2b2 of status for SHRINE-1497. Mixed in some work…
b66421c3cebf
·David Walend on Jun 16 2016, 18:59.

May 18 2016

Separated most of the QEP components from ShrineOrchestrator, and found and…
161ebb92aec0
·David Walend on May 18 2016, 18:01.

Apr 19 2016

Removed QepConfig and associated baggage for SHRINE-1041
f0cb8f1ade70
·David Walend on Apr 19 2016, 16:54.

Apr 18 2016

Moved a lot of goop from ShrineOrchestrator to…
37b9f97de0ea
·David Walend on Apr 18 2016, 20:06.

Apr 15 2016

Removed authenticationType from ShrineOrchestrator for SHRINE-1041
12e53983e2ec
·David Walend on Apr 15 2016, 22:18.
Pinned down AuthorizationType for SHRINE-1041
c5755db71746
·David Walend on Apr 15 2016, 20:44.
Dissolved a lot of AuthStrategy for SHRINE-1041
44eebba9827a
·David Walend on Apr 15 2016, 17:59.
Big cleanup of DSA authorizer for SHRINE-1041
2576f4735829
·David Walend on Apr 15 2016, 15:19.

Apr 14 2016

Untangled some of the mess around QueryEntryPointComponents for SHRINE-1041
031efefe1ec9
·David Walend on Apr 14 2016, 21:14.
Worked through mixed concerns in the hub and qep configs for SHRINE-1041
5dd2f2290838
·David Walend on Apr 14 2016, 20:23.

Apr 1 2016

breakdownResultOutputTypes for SHRINE-1041
147f98ddb2b4
·David Walend on Apr 1 2016, 21:04.

Mar 30 2016

Last of the fixes for SHRINE-1113 updated all the test code and removed the old…
963eb3d73c31
·David Walend on Mar 30 2016, 17:34.
More SHRINE-1113. Switched to new API in I2b2BroadcastResource
eee398843d7e
·David Walend on Mar 30 2016, 15:59.

Mar 22 2016

Merge branch 'release/1.21.0' into develop
39b793677701
·David Walend on Mar 22 2016, 17:10.
Missing database statements for SHRINE-1388
23c410f3c6de
·David Walend on Mar 22 2016, 17:06.

Mar 18 2016

Merge branch 'release/1.21.0' into develop
3917f1682433
·David Walend on Mar 18 2016, 21:09.
Possible fix for SHRINE-1388
f146bb0dafa6
·David Walend on Mar 18 2016, 21:08.

Mar 17 2016

Updated mssql and oracle qep audit schemas for SHRINE-1377
18ee728afe67
·David Walend on Mar 17 2016, 19:41.
Making the ResultOutputType optional. More hope for SHRINE-1377
3a20bb0b9ad2
·David Walend on Mar 17 2016, 17:46.

Mar 16 2016

Possibly a fix for SHRINE-1377 - QueryResults with ERRORs don't have result…
6c50f60966df
·David Walend on Mar 16 2016, 21:35.
Added sorting to selectPreviousQueriesByUserAndDomain() to pick most recent…
6cbb20c19235
·David Walend on Mar 16 2016, 16:34.

Mar 11 2016

Removed held field from QueryMaster.
3d57ca1786f0
·David Walend on Mar 11 2016, 20:55.

Mar 8 2016

Added a trap for SqlExceptions coming from the QEP's database.
f769de87b136
·David Walend on Mar 8 2016, 20:39.
Added new problem response for trouble running a query in the qep
f145827ebd51
·David Walend on Mar 8 2016, 20:00.

Mar 7 2016

VARCHAR(MAX) replaces TEXT in mssql
e361f941f697
·David Walend on Mar 7 2016, 22:17.
Fixes for Oracle schema
8ba321c3dde9
·David Walend on Mar 7 2016, 20:55.
Added configurable timeout for the qep's communication with the qep db cache
f253511819a9
·David Walend on Mar 7 2016, 17:21.

Mar 4 2016

Now transferring data between databases on shrine-dev
b6f766a02ebe
·David Walend on Mar 4 2016, 17:08.

Mar 3 2016

Bulk of the code for priming the previous queries table
5648e6caae51
·David Walend on Mar 3 2016, 19:36.

Feb 29 2016

Interpretting fetchSize as an SQL limit for SHRINE-1309
b4ec1b02dc2d
·David Walend on Feb 29 2016, 18:09.
Interpretting fetchSize as an SQL limit for SHRINE-1309
d169d3654ae3
·David Walend on Feb 29 2016, 17:11.

Feb 25 2016

Removed the hack to get auth errors
d0726394537c
·David Walend on Feb 25 2016, 21:46.
Added a NotAuthenticatedProblem to report problems with authentication that…
1c3ea56d1424
·David Walend on Feb 25 2016, 21:27.
Hack to get an exception from the QEP
81211412c355
·David Walend on Feb 25 2016, 19:49.
Now authenticating everythign that happens in the QepService and…
bedefc0f6215
·David Walend on Feb 25 2016, 17:36.

Feb 23 2016

First try at oracle and msssql ddls for the new tables in the qep.
cf1ae4c6d5be
·David Walend on Feb 23 2016, 21:24.
Got rid of ResultOutputType.PATIENTSET
87af747198fb
·David Walend on Feb 23 2016, 17:14.

Feb 22 2016

Added support for configured breakdown types
9b302f58581e
·David Walend on Feb 22 2016, 22:11.
Better error message for SHRINE-1299
2bf0f425c61e
·David Walend on Feb 22 2016, 21:52.
Added logging of the response
29820016199b
·David Walend on Feb 22 2016, 21:07.

Feb 18 2016

Need to update the times to pick up the delete
ff5a1baf4ea1
·David Walend on Feb 18 2016, 21:45.
Plugging in method to delete queries
9f94c89c8868
·David Walend on Feb 18 2016, 21:22.
Support for renaming and deleting queries
3f85e99a94aa
·David Walend on Feb 18 2016, 21:04.
Renaming before using in the db code
73feda32acaa
·David Walend on Feb 18 2016, 19:49.