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Commit | Author | Details | Committed | ||||
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7e6021fdbf6d | fabien | Add a database test that loads the Cemdata database | Apr 1 2015 | ||||
ea534669b0e6 | fabien | Add the ability to solve oxydoreduction system | Apr 1 2015 | ||||
9a83589563ca | fabien | Add the Faraday constants to the list of constants | Apr 1 2015 | ||||
cb51196a93d4 | fabien | Add AqueousSelector and OxydoSelector | Apr 1 2015 | ||||
522d1d188e48 | fabien | Add cemdata.js | Apr 1 2015 | ||||
690a91cea2b7 | fabien | Improve the main CMakeLists.txt | Apr 1 2015 | ||||
8d287d0302ef | fabien | Refactor residual and jacobian in specmicp | Mar 31 2015 | ||||
4438bed8f0a6 | fabien | Correct include in micpsolver.inl | Mar 31 2015 | ||||
a915d2a00af6 | fabien | Small changes in micpsolver | Mar 27 2015 | ||||
665b1c9415f6 | fabien | fixes commit 0174eeb | Mar 27 2015 | ||||
3f78fff02e69 | fabien | Optimize the semismooth reformulation | Mar 27 2015 | ||||
953d28abf77f | fabien | Use the findOpenMP package in the CmakeList file | Mar 26 2015 | ||||
b264515ec25e | fabien | Udpdate license text in database module | Mar 26 2015 | ||||
0174eeb1cf69 | fabien | Small optimization, avoid checking and scaling the molar volumes too many times… | Mar 26 2015 | ||||
33d3d8b8a771 | fabien | Intern refactoring of AdimensionalSystem | Mar 26 2015 | ||||
971c8d029f9b | fabien | Update examples | Mar 25 2015 | ||||
fa87e6334e88 | fabien | Disable bulk copy of variables for now - to fix | Mar 25 2015 | ||||
3240263f41a0 | fabien | Update ReactMiCP for the new databse module | Mar 25 2015 | ||||
1cd97637d904 | fabien | Minor changes/bug fixes in the database module | Mar 25 2015 | ||||
b8e581491519 | fabien | Add timers in database test | Mar 25 2015 | ||||
ac7ea29f1b9b | georget | Small correction to allow compilation with gcc 4.8.3 | Mar 25 2015 | ||||
cdb78898dc90 | fabien | The timer is started when initialized | Mar 25 2015 | ||||
ca8840ad97b9 | fabien | Update dependancies in tests/CMakelists, download catch if necessary | Mar 25 2015 | ||||
0d36c29be443 | fabien | comment redefinition of the release flags | Mar 25 2015 | ||||
a13a47bb5ca8 | fabien | update INSTALL with examples command for cmake | Mar 25 2015 | ||||
cbf1fa082c49 | fabien | Update the specmicp tests | Mar 25 2015 | ||||
5c5454d4c9b4 | fabien | Update the databases to include the electron in the basis | Mar 25 2015 | ||||
c6b716588c1d | fabien | Update the adimensional system for the new database module | Mar 25 2015 | ||||
87fc4962ea72 | fabien | Bug fixes and minor improvements in the database module | Mar 25 2015 | ||||
3db25ff1295e | fabien | remove import of database::Database in src/database.hpp | Mar 25 2015 | ||||
c2ae9df66c89 | fabien | The index_t and EIGEN_DEFAULT_DENSE_INDEX_TYPE is now consistent | Mar 25 2015 | ||||
dfd04be5d63c | fabien | Remove all the old code in the reactmicp folder | Mar 24 2015 | ||||
7f9de8ece968 | fabien | Remove the ReducedSystem | Mar 24 2015 | ||||
f2e30c0148d8 | fabien | Remove example for the ReducedSystem reactmicp | Mar 24 2015 | ||||
0a851fd28c2c | fabien | Remove test for ReducedSystem | Mar 24 2015 | ||||
c3defdf79457 | fabien | Add tests for the new database module | Mar 24 2015 | ||||
c2a8ab6f9a8e | fabien | Improves the database | Mar 24 2015 | ||||
ce7cf38633f9 | fabien | include half-cells reaction in the database | Mar 19 2015 | ||||
aa2cfcd016e3 | fabien | improve signature of functions in the physics module | Mar 19 2015 | ||||
82d0adb9bd56 | fabien | Add NOEXCEPT macor, noexcept if not in debug mode | Mar 19 2015 | ||||
cb15e034fead | fabien | Improve the OpenMP section | Mar 19 2015 | ||||
980ddb553f7b | fabien | Improve the cythom cmakelist, python 3 compilation still doesn't wok | Mar 17 2015 | ||||
673c19a9c45f | fabien | Sligthly imporve the INSTALL file | Mar 17 2015 | ||||
440944f1045f | fabien | Update the carbonation example to use the new runner class for the reactive… | Mar 17 2015 | ||||
f952caf0c318 | fabien | add a convenience function in specmicp adimensional solver to solve a system | Mar 17 2015 | ||||
a1bb082f067b | fabien | Add a runner class for the reactive transport solver | Mar 17 2015 | ||||
c9a42d8c3f55 | fabien | In reactive transpor solver, return a reference to the timer instead of a copy | Mar 17 2015 | ||||
e5adba3b79c0 | fabien | Add the member reset_main_variables in reactmicp::solver::VariablesBase | Mar 17 2015 | ||||
08dbc2f3e912 | fabien | import reactive transport timestepper | Mar 17 2015 | ||||
719661d3e345 | fabien | add more access to the starting and ending point of a timer, aslo correct const… | Mar 17 2015 | ||||
941766fc8a67 | fabien | Add and improve functions in the io library | Mar 17 2015 | ||||
70851d283152 | fabien | Update reactive transport examples | Mar 13 2015 | ||||
e94e903fe893 | fabien | Update headers in the src/specmicp/adimensional files | Mar 13 2015 | ||||
8e74befa1920 | fabien | Disable the descent condition in the AdimensionalSystemSolver. | Mar 13 2015 | ||||
5e764b31a7c6 | fabien | Add a return value (boolean) in the AdimensionalSystemPCFM::check_validity | Mar 13 2015 | ||||
2ab1f72f9891 | fabien | Remove the check for Total concentration too small in the reactive transport… | Mar 13 2015 | ||||
746e385268f2 | fabien | Add member functions in MiCPSolverOptions to help set the options | Mar 13 2015 | ||||
136d82ff2ccb | fabien | Bypass the descent condition if the factor is negative in the MiCPsolver | Mar 13 2015 | ||||
d16ed536054f | fabien | Remove the cut-off for including a component in the total concentration; the… | Mar 13 2015 | ||||
f5f97272d811 | fabien | Add a threshold for including the component in the computation in… | Mar 13 2015 | ||||
bf325999f473 | fabien | update specmicp AdimensionalSystem tests | Mar 13 2015 | ||||
45037ebada12 | fabien | upate/correct carbonation example | Mar 12 2015 | ||||
0ecb38c075e0 | fabien | Update the leaching example | Mar 6 2015 | ||||
db3acd9b0ce6 | fabien | Update the carbonation example | Mar 6 2015 | ||||
331aa30110ba | fabien | add member function is SaturatedVariables to access main variables directly | Mar 6 2015 | ||||
532031755403 | fabien | Add a saturated carbonation example | Mar 4 2015 | ||||
f26e0452c13c | fabien | Minor enhancements in the Timestepper | Mar 4 2015 | ||||
64fa3c732f53 | fabien | correct generic 1D mesh | Mar 4 2015 | ||||
d003a8e04654 | fabien | refectoring of MoMas benchmark | Mar 4 2015 | ||||
9b6952672e10 | fabien | Add potassium to the cemdata database | Mar 4 2015 | ||||
91a8a4602873 | fabien | Update the momas benchmark | Mar 2 2015 | ||||
d4f8837fe33a | fabien | Add new ReactiveTransportSolverReturnCode in the IO library | Mar 2 2015 | ||||
5acd30632a6a | fabien | improve detection of problems in the ReactiveTransportSolver | Mar 2 2015 | ||||
9873b241a642 | fabien | Change the message for ErrorMinimized in MiCPSolver | Mar 2 2015 | ||||
aa631431a161 | fabien | Add a absolute tolerance test for the residuals in the parabolic driver | Mar 2 2015 | ||||
414ceaa6732a | fabien | update examples | Feb 28 2015 | ||||
f2a40262416b | fabien | add more output function | Feb 28 2015 | ||||
abe3dbcbe88d | fabien | Add more information about time in ReactiveTransportPerformance | Feb 28 2015 | ||||
67e8b2d9680e | fabien | Add a member in SaturatedReact::Variables to reset the main variables | Feb 28 2015 | ||||
9cf41f6dfb45 | fabien | Randomize the restarting guess in AdimensionalSystem. | Feb 28 2015 | ||||
a7efb1b1706d | fabien | update Cmakelist, better treatments of compilation flags | Feb 27 2015 | ||||
bf7a37fc71e9 | fabien | Add a simple io library to output data | Feb 27 2015 | ||||
39c9426c395d | fabien | Use the new timer class in the reactive transport solver | Feb 27 2015 | ||||
10ab4cafbaa0 | fabien | Add a simple timer class | Feb 27 2015 | ||||
bddaf0d936da | fabien | Add a validity check (just print warning and or error for the PCFM method… | Feb 27 2015 | ||||
38a97fbd2242 | fabien | When possible only factorize the matrix, without analysing the pattern again… | Feb 26 2015 | ||||
53237ab864d3 | fabien | Separate the analysePattern and factorization part of the sparse matrix… | Feb 26 2015 | ||||
f7c3cd7d6b9b | fabien | save the ndf in the transport program and set inline | Feb 26 2015 | ||||
ef1c9b4db70b | fabien | Minor update in the Momas benchmark database | Feb 26 2015 | ||||
339c6d31875f | fabien | Add a generic 1D mesh, issue #13 | Feb 26 2015 | ||||
9417b8aab783 | fabien | add a timer in the reactive transport solver to obtain more information about… | Feb 26 2015 | ||||
0b1682bb59f9 | fabien | Correct the AdimensionalSystem jacobian, fixes issue #29 | Feb 25 2015 | ||||
5cde60cd6d35 | fabien | Add a member to update the parameter in ExponentialMovingAverage: | Feb 25 2015 | ||||
327e2020bb5c | fabien | add a variadic template for custom initialization of the opn class in Option… | Feb 25 2015 | ||||
67ebd8dda96d | fabien | update momas example: | Feb 25 2015 | ||||
7ea49ff12a15 | fabien | obtain chemistry error in reactive transport solver, fixes issue #16 | Feb 25 2015 | ||||
e403516d3274 | fabien | add an adaptative timestepper algorithm | Feb 25 2015 | ||||
4acc10bf1dca | fabien | update momas benchmark | Feb 25 2015 | ||||
ac9b4eb735f4 | fabien | Correct the surface model, so the activity are defined with respect to the… | Feb 25 2015 | ||||
a4055a6a6783 | fabien | Correct porosity computation, minerals offset | Feb 24 2015 |
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