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History Graph
History Graph
Commit | Author | Details | Committed | ||||
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e97e0bf083a1 | georget | minor:common:config correct missing template for list_to_vector | Sep 11 2018 | ||||
214797a684c2 | georget | reactmicp:binary add chloride binary (and an example) | Sep 10 2018 | ||||
7401b2cbe674 | georget | reactmicp:chloride small fixes all around | Sep 10 2018 | ||||
4f4f8a3c1bd2 | georget | fix:reactmicp initialize timers correctly | Sep 10 2018 | ||||
3a40cecce487 | georget | bin:reactmicp factorize some function in reactmicp app_core | Sep 10 2018 | ||||
3930bc94eb79 | georget | common:safe_config fix map iterator, to iterate over different types | Sep 10 2018 | ||||
e6f837d5a88a | georget | adim:tests correct jacobian test precision | Sep 2 2018 | ||||
d67c91abddd2 | georget | dfpm:test make sure last noe of axisymmetric mesh is at 0 | Sep 2 2018 | ||||
db9ec96e4200 | georget | test: bump catch2 to version 2.3.0 | Sep 2 2018 | ||||
29ed1db4fb30 | georget | reactmicp:chloride start working towards exec for chloride system | Aug 24 2018 | ||||
0b52e3b5e97f | georget | reactmicp:runner move some function of SimulationInfo to cpp file | Aug 24 2018 | ||||
375cb4f0deed | georget | reactmicp:bin reorganize unsaturated binary to allow reuse for chloride binary | Aug 24 2018 | ||||
df14d38fdd98 | georget | common:openmp improve eigen parallel support | Aug 24 2018 | ||||
e9b4e9a93f97 | georget | database:print add member to print general info in conf log | Aug 24 2018 | ||||
12ee7fce271b | georget | reactmicp:chloride improve boundary conditions and add configuration | Aug 15 2018 | ||||
773188cd2fbe | georget | reactmicp:systems move AdimConstraints into common | Aug 15 2018 | ||||
5051d957d18f | georget | reactmicp:common move configuration for equilibriumOptionsVector to common | Aug 15 2018 | ||||
68302da2615f | georget | reactmicp:chloride add HDF5 reader/saver | Aug 14 2018 | ||||
ccc131052ac4 | georget | reactmicp:chloride misc improvement | Aug 14 2018 | ||||
4a73e9b95387 | georget | reactmicp:unsaturated update to new common reactmicp system | Aug 14 2018 | ||||
c56a7c260189 | georget | reactmicp:systems add common to gather boilerplates between systems | Aug 14 2018 | ||||
c462fd6916c2 | georget | hdf5:timesteps add member to retrieve timesteps as strings | Aug 14 2018 | ||||
4af1bea1b14d | georget | common:hdf5 add partial read of datasets | Aug 14 2018 | ||||
0363df1a334f | georget | reactmicp:chloride constraints is provided by BCs | Aug 7 2018 | ||||
44a3ef5ab597 | georget | reactmicp:chloride add init_variables | Aug 7 2018 | ||||
3e713c77b395 | georget | reactmicp:chloride transport stagger now use chem stagger | Aug 7 2018 | ||||
1acce8e96b7d | georget | reactmicp:chloride use openmp in transport stagger | Jul 3 2018 | ||||
fc5f9eb0803a | georget | reactmicp:minor public classes in libraries | Jun 29 2018 | ||||
38c6305ed272 | georget | Merge branch 'chloride' of bitbucket.org:specmicp/specmicp into chloride | Jun 25 2018 | ||||
cc0bc69f6348 | georget | reactmicp:chloride bit of cleaning in transport program | Jun 25 2018 | ||||
ad3ed20db6c3 | georget | examples: update momas example to new sorption | Jun 25 2018 | ||||
25b655cbf3cf | georget | major:specmicp add sorption EDL model | Jun 25 2018 | ||||
824b243e25d0 | georget | major:database new sorbed species system | Jun 25 2018 | ||||
143633e7a9ad | georget | minor: modify benchmarks to new benchmark version | Jun 25 2018 | ||||
a908a67d3e8c | georget | database:breaking refactor interface: only one surface site per sorbed species | Apr 10 2018 | ||||
1a9ce37fc033 | georget | specmicp: update specmicp system to new database format | Apr 3 2018 | ||||
d86d6fd4da06 | georget | database:breaking Add multiple surface sites | Apr 3 2018 | ||||
b565a6c9ae5e | georget | example: update migration example | Mar 11 2018 | ||||
39bff88c9e9a | georget | build:minor add option to disable reactmicp system | Mar 3 2018 | ||||
2ca26e872401 | georget | minor:chloride make sure test run faster. | Mar 2 2018 | ||||
349940604565 | georget | common:fix density computation | Mar 2 2018 | ||||
567a7dcef6d9 | georget | chloride: add examples | Feb 21 2018 | ||||
141c345d74de | georget | specmicp: add charge balance computation in extractor | Feb 21 2018 | ||||
1ca349fa1a0e | georget | chloride: fixes for chemistry solver in transport program | Feb 21 2018 | ||||
628531a71b14 | georget | chloride: perturb adim, current and potential init | Feb 14 2018 | ||||
03817253affd | georget | chloride: good equilibrium obtained for Na/Cl system | Feb 13 2018 | ||||
af1c6caafe71 | georget | mesh:minor check input for range mesh | Feb 13 2018 | ||||
aee5da67f2eb | georget | dfpm:minor style corrections | Feb 13 2018 | ||||
35557e3cfb69 | georget | tmp: lot small changes for system transfer | Jan 29 2018 | ||||
848705901e68 | georget | chloride: more work on the chloride system | Dec 22 2017 | ||||
3df7e4247bb7 | georget | common:add helpers function for eigen | Dec 22 2017 | ||||
c06fce498b9a | georget | fix:Smart solver now use units from reactant box | Dec 22 2017 | ||||
c900f5ba2d13 | georget | chloride:fix with tests | Dec 11 2017 | ||||
8a7c3529bcc0 | georget | reactmicp:add helper function to transform dfpm return code | Dec 11 2017 | ||||
00f02a85ce08 | georget | continuing chloride system implementation | Dec 8 2017 | ||||
5d637ad6be6d | georget | reactmicp: add member to ChemistryStaggerBase | Nov 27 2017 | ||||
2e2b628aa887 | georget | common:add a generic return code for solver-agnostic algorithms | Nov 27 2017 | ||||
3a45c7fe073a | georget | chloride: first commit for new chloride system | Nov 20 2017 | ||||
3e3001b7784a | georget | test:fix remove bad dependancy in io_hdf5_meshes | Nov 10 2017 | ||||
f915e6b208c1 | georget | build:fix YAML imported target for cmake < 3.7.0 | Nov 8 2017 | ||||
5f551f547deb | georget | docker: update docker files | Nov 7 2017 | ||||
d4fc19a685a4 | georget | test:fix move to Catch2 | Nov 7 2017 | ||||
ae89bd4c49f6 | georget | build:fix fix the fix for hdf5 | Nov 7 2017 | ||||
fcd46f4bbaa8 | georget | build:fix use correct hdf5 library path | Nov 1 2017 | ||||
cb0ab9a56b35 | georget | build:minor remove gcc7 warning with eigen includes | Nov 1 2017 | ||||
50d9a67908d3 | georget | build:fix PGO optimization | Oct 31 2017 | ||||
dee7f564bf24 | georget | fix: install specimcp_common/config.h header | Oct 31 2017 | ||||
45799c295e84 | georget | build:fix be sure to pass EIGEN3_UNSUPPORTED_FOUND definition | Oct 30 2017 | ||||
4fcb60e988fc | georget | dfpm:fix:minor correct typo | Oct 30 2017 | ||||
52bed7d1d852 | georget | Merge branch 'master' of bitbucket.org:specmicp/specmicp | Oct 29 2017 | ||||
3bbaea7497b8 | georget | build:feature add option to use lapacke in Eigen | Oct 29 2017 | ||||
c8b8d225dd2d | georget | build: fix yaml import target for cmake < 3.6 | Oct 27 2017 | ||||
921a58bdaf61 | georget | Some more comments | Oct 27 2017 | ||||
7bba7974bc8a | georget | fix:build fix typo in package config file | Sep 13 2017 | ||||
d2545c482392 | georget | fix:eigen fix sparse_lu module | Sep 13 2017 | ||||
a36c9e0601c1 | georget | build:fix let's fix the examples | Sep 13 2017 | ||||
d796dbb0343c | georget | build:fix now it's the turn of bin/tests and benchmarks | Sep 13 2017 | ||||
2af1350d30dd | georget | build:fix fix dfpm dependancy to yaml-cpp | Sep 13 2017 | ||||
9e31d0b9115e | georget | build:fix one more for the road baby | Sep 13 2017 | ||||
b792a2956ec6 | georget | build:fix add PkgConfig::YAML target for old cmake | Sep 13 2017 | ||||
25c945ad9a59 | georget | build:fix database uses plain yaml interface | Sep 13 2017 | ||||
6357db487983 | georget | build:fix use imported hdf5 path, #blamedebian | Sep 12 2017 | ||||
fd1f6982eaf8 | georget | build:fix fix hdf5 include dirs | Sep 12 2017 | ||||
e7d68c9347c5 | georget | build:fix well... | Sep 12 2017 | ||||
b928052f5fbc | georget | build:fix add yaml include dirs #blame-debian | Sep 12 2017 | ||||
569af6df0266 | georget | build: fix the fix, std(11)(14) compilation | Sep 12 2017 | ||||
40b83bbfcf6f | georget | build: fix main CMakeLists for cmake <3.8 | Sep 12 2017 | ||||
990fa8a6d5ec | georget | build: Add SpecMiCPConfig.cmake : package file | Sep 12 2017 | ||||
9f0bfa6957ca | georget | build: refactor cmake file for cmake config file | Sep 11 2017 | ||||
4728ae8e7325 | georget | doc: More documentation ! | Aug 22 2017 | ||||
ca7b5e361a03 | georget | fix propagates typo correction | Aug 4 2017 | ||||
af5dbe8741b3 | georget | build: correct lto for clang | Aug 4 2017 | ||||
f7c95635bdac | georget | Documentation run | Aug 4 2017 | ||||
b4fb4366dd98 | georget | fix: compilation with clang++ | May 16 2017 | ||||
0a6168e296d9 | georget | minor: complete specmicp bin to match unsaturated | May 16 2017 | ||||
338641c069f9 | georget | minor: format fix | Apr 28 2017 | ||||
c0c0ab67b44e | georget | fix:test correct specmicp_bin arguments | Apr 28 2017 | ||||
e6c26c6b2885 | georget | common: fix cli parser backend | Apr 28 2017 | ||||
c0da2ae5f913 | georget | specmicp:bin update to match reactmicp-unsaturated | Apr 21 2017 | ||||
65d091e2f810 | georget | database: add ENV reader for db | Apr 21 2017 |
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