Diffusion SpecMiCP / ReactMiCP (dev) History

History
devd932ef871dd35717310377f…

Apr 11 2016

feat:docker fedora-23, debian-stretch dockerfiles
d932ef871dd3
·georget on Apr 11 2016, 20:59.
fix:test:specmicp_common get_env test fix
e8ccb0eec719
·georget on Apr 11 2016, 20:56.
upd:eigen fix for eigen3.3 compatibility
28db9f5617e8
·georget on Apr 11 2016, 20:39.

Apr 10 2016

fix:tests remove old hdf5 headers
59eff7e2c37b
·georget on Apr 10 2016, 21:59.
fix:examples:acc_carbo remove unecessary hdf5 headers
7e7115cf2633
·georget on Apr 10 2016, 21:47.
fix:headers remove inclusion of old HDF5 header
70876358221d
·georget on Apr 10 2016, 21:33.
minor:build mark LTO_<program> vars as advanced in cmake lto module
92b60da223b3
·georget on Apr 10 2016, 18:26.
impr:build Create FindEigen3Unsupported module for eigen3/Unsupported
e16dc3485596
·georget on Apr 10 2016, 18:25.

Apr 9 2016

fix:build fix hdf5 include directories
97dcff9fa40d
·georget on Apr 9 2016, 20:27.
del:dependancy remove dependance to HDF5 API
755485bbb4f1
·georget on Apr 9 2016, 17:51.
del:io:hdf5 remove old hdf5 wrapper around CPP HDF5 API
975cd3433232
·georget on Apr 9 2016, 17:48.

Apr 7 2016

fix:dfpm:parabolic_solver check if jacobian was successful
3cdc4047b2b0
·georget on Apr 7 2016, 19:47.
update:tests:reactmicp:acc_carbo
234b5432d69a
·georget on Apr 7 2016, 18:03.
fix:reactmicp:unsaturated:transport_stagger move dfpm solver initialization
8d7445331c34
·georget on Apr 7 2016, 17:56.
impr:reactmicp:solver print debug information if return code is good enough
6e88c9b19244
·georget on Apr 7 2016, 17:49.

Apr 6 2016

impr:test:reactmicp:binary:acc_carbo
74396fa02de7
·georget on Apr 6 2016, 22:46.
impr:reactmicp:unsaturated only compute residual 0 when initialisation is done
080906e9f926
·georget on Apr 6 2016, 22:45.
tests:unsaturated:acc_carbo change boundary conditions, use fixed flux for…
692a760b74f8
·georget on Apr 6 2016, 19:23.
impr:reactmicp:unsaturated compute equilibrium for each node at the beginning…
5f8a1f17204f
·georget on Apr 6 2016, 19:20.
Compute the total concentration vector
e37f8beae96e
·georget on Apr 6 2016, 19:20.

Apr 4 2016

impr:specmicp:extractor add total_solid_mass_concentration getter function
8da77adabb31
·georget on Apr 4 2016, 18:02.

Apr 1 2016

impr:io:hdf5:timesteps add operator[] to get a timestep by position
98ba3a9d616f
·georget on Apr 1 2016, 19:33.
fix:build install specmicp/reactmicp main headers
d72d8bcb98a4
·georget on Apr 1 2016, 19:00.

Mar 31 2016

docs:in_progress start more complete documentation of reactmicp
5441d357496a
·georget on Mar 31 2016, 02:35.
impr:specmicp:extractor compute total mass concentration
45661894a19a
·georget on Mar 31 2016, 02:35.
impr:reactmicp:unsaturated openmp directives -> change scheduling for solving…
abfc691f2c1d
·georget on Mar 31 2016, 02:35.
impr:reactmicp:unsaturated:io rewrited hdf5 saver/reader using new wrapper
3e0ab284bd47
·georget on Mar 31 2016, 02:35.
impr:database species can return the vector of labels, useful for IO
8f098384db8a
·georget on Mar 31 2016, 02:35.
upd:database:io:hdf5 update hdf5 output to new wrapper
55b54e9c16de
·georget on Mar 31 2016, 02:35.
upd:dfpm:io:hdf5 move hdf5 output to new wrapper
8618dbed70e1
·georget on Mar 31 2016, 02:35.
impr:io:hdf5 more wrapping around hdf5
4bb0e2c6c160
·georget on Mar 31 2016, 02:35.
fix:common:yaml_format higher precision for database output
ca73ab03cfed
·georget on Mar 31 2016, 01:59.

Mar 28 2016

upd:hdf5 Use the new hdf5 wrapper API in HDF5timesteps
7436518aa391
·georget on Mar 28 2016, 15:41.

Mar 25 2016

upd:specmicp:hdf5 save adim solution using new hdf5 wrapper
37417552df4c
·georget on Mar 25 2016, 18:59.
feat:io:hdf5 more wrapper
0bf1cbc67cee
·georget on Mar 25 2016, 18:58.

Mar 24 2016

feat:io:hdf5 add new HDF5 C API wrapper
b228fbc4dd5c
·georget on Mar 24 2016, 14:48.

Mar 21 2016

fix:build install main specmicp_common headers
681cd24cdd7c
·georget on Mar 21 2016, 20:34.
upd:reactmicp runner also output the resource usage information
1e56d0882286
·georget on Mar 21 2016, 20:30.
feat:specmicp_common basic resource usage information
5ad2f9b7bdde
·georget on Mar 21 2016, 20:29.

Mar 20 2016

doc:reactmicp:solver
18753ecb08de
·georget on Mar 20 2016, 16:36.
doc:specmicp_common
9c102ac65486
·georget on Mar 20 2016, 16:34.
fix:docs doxygen configuration, don't documente .cpp
fe4427ec1e6d
·georget on Mar 20 2016, 16:34.

Mar 19 2016

cosmetic:common:vector_checker put details in sub namespace and docs
c8a930e056dd
·georget on Mar 19 2016, 21:14.

Mar 18 2016

feat:specmicp Reactant box can now return a set of constraints
d94792a4f65f
·georget on Mar 18 2016, 22:42.
impr:specmicp:extractor add cache for unit conversions
20f010b038f7
·georget on Mar 18 2016, 19:30.
impr:tests:reactmicp:unsaturated condition check of MiCPSolver can be disabled
d1c80679be58
·georget on Mar 18 2016, 15:54.
upd:reactmicp:solver hide implementation details of runner
e21028dfd1f9
·georget on Mar 18 2016, 14:44.

Mar 17 2016

fix:reactmicp:solver timer, and timer output
8b85285ada0c
·georget on Mar 17 2016, 15:39.
fix:binary:unsaturated plugins name
1f3cc82ccbe0
·georget on Mar 17 2016, 14:02.
doc:specmicp_common
3f7631e04176
·georget on Mar 17 2016, 02:43.
impr:plugins clear plugins naming scheme
8c6f18b219e5
·georget on Mar 17 2016, 01:54.
upd:test:reactmicp:unsaturated update acc_carbo_* test
c3219d5b0b84
·georget on Mar 17 2016, 01:51.

Mar 16 2016

impr:reactmicp:unsaturated can now use millimoles unit
41fa07d8cfab
·georget on Mar 16 2016, 15:44.
test:specmicp:problem solver add tests for non SI units
5a2fb3e52f6c
·georget on Mar 16 2016, 15:28.
fix:micpsolver fix perf struct addition, return the last residual
1f66c20f5a45
·georget on Mar 16 2016, 15:27.
fix:specmicp millimoles unit now works !
4412fddf1e1c
·georget on Mar 16 2016, 15:26.
impr:units add liter in volume unit
c971cf4615b6
·georget on Mar 16 2016, 15:21.
fix:build same options to build reactimcp_unsaturated with static libs`
52a48c08d9b4
·georget on Mar 16 2016, 15:13.

Mar 14 2016

fix:specmicp:probelm_solver units, units, units
8097bf3fab7d
·georget on Mar 14 2016, 15:17.

Mar 13 2016

feat:specmicp ReactantBox : initial formulation with units
9149aa40938d
·georget on Mar 13 2016, 21:44.
impr:specmicp_common:laws add function to obtain density of water with correct…
ab4484108d65
·georget on Mar 13 2016, 21:43.

Mar 11 2016

fix:test:specmicp_common add missing Approx()
b5ef1eadcb8b
·georget on Mar 11 2016, 04:51.
upd:units use new units system
446e84e51406
·georget on Mar 11 2016, 04:51.
upd:database add a global variable giving the units used internally
470a55f4feaf
·georget on Mar 11 2016, 04:51.
impr:units add SI and CMG units as global variables
4b53dfe6a743
·georget on Mar 11 2016, 04:51.
upd:specmicp adim system used new moles unit
1ecc67c5bb68
·georget on Mar 11 2016, 00:50.
upd:database use new mol unit, deprecate old unit conversion functions
d8b704dea3af
·georget on Mar 11 2016, 00:48.

Mar 10 2016

feat:units add quantity of matters unit in specmicp_common
d4e389fc2ce0
·georget on Mar 10 2016, 20:12.

Mar 7 2016

fix:tests:acc_carb it works ! (did it ?)
f6d6aa5161c0
·georget on Mar 7 2016, 21:49.
cosmetic:unsaturated
712a7e059d81
·georget on Mar 7 2016, 21:46.
impr:reactmicp move all timestep initialization to transport stagger
81ec8df88413
·georget on Mar 7 2016, 21:43.
impr:unsaturated:chemistry return option vector
06a7c676281b
·georget on Mar 7 2016, 21:38.
impr:reactmicp share chemistry and transport stagger with upscaling stagger
3d97f5b10cac
·georget on Mar 7 2016, 21:32.

Mar 6 2016

impr:scripts:analyser Clean, improve unsaturated analyser module
d427dd2f97b9
·georget on Mar 6 2016, 18:14.

Mar 2 2016

fix:unsaturated:analyser fix python syntax error
c535dabb42f8
·georget on Mar 2 2016, 17:53.
cosmetic:micpsolver debug messages
a87642f4f330
·georget on Mar 2 2016, 17:43.
impr:bin:unsaturated User can give working directory as CLI argument
46a8244a02b1
·georget on Mar 2 2016, 17:08.
impr:reactmicp:solver allow passing the working directory
c5400cbd468d
·georget on Mar 2 2016, 17:07.
impr:logs allow passing the working directory
43833ec52c24
·georget on Mar 2 2016, 17:05.
upd:tests:unsaturated:acc_carbo
8f11536753a0
·georget on Mar 2 2016, 16:07.
fix:unsaturated many small corrections
72260a03c6cc
·georget on Mar 2 2016, 16:01.
impr:filesystem add function to check if path is absolute
6443f8a7a8ec
·georget on Mar 2 2016, 15:55.

Feb 29 2016

fix:examples:drying.cpp fix include
9f363e55a877
·georget on Feb 29 2016, 18:56.
upd:reactmicp:tests:acc_carbo
1cc22ddd5d41
·georget on Feb 29 2016, 18:46.
fix:reactmicp:unsaturated fix ? some work still needed on merged equations
f7dff2d80197
·georget on Feb 29 2016, 18:44.
impr:reactmicp:unsaturated use smart solver if needed in equilibrium stagger
d4df81a69eac
·georget on Feb 29 2016, 15:32.
impr:reactmicp call to transport stagger to print information
4eccfa347703
·georget on Feb 29 2016, 15:28.
binary:unsaturated add options to save database before computation
ad0acbd54cc9
·georget on Feb 29 2016, 15:26.
feat:specmicp:workinprogress add a "smart solver" for specmicp
535d95297fcc
·georget on Feb 29 2016, 15:22.

Feb 26 2016

upd:example:reactmicp:binary:acc_carbo
92294aef0274
·georget on Feb 26 2016, 17:35.
impr:unsaturated add debug information in equilibrium_stagger
c54dc4629ec7
·georget on Feb 26 2016, 17:33.
impr:micpsolver print residuals in error output
4849fec17c96
·georget on Feb 26 2016, 17:30.
impr:specmicp:config add 'inert_volume_fraction' option in configuration
bf4a7246412a
·georget on Feb 26 2016, 17:17.
impr:specmicp only solve pressure model if we solve non ideality model
2c3c47ab3079
·georget on Feb 26 2016, 17:16.
impr:specmicp add options to specify restart water volume fraction
70236c20c4d2
·georget on Feb 26 2016, 16:43.
fix:systems:unsaturated:variables also reset secondary variables
c47f2ae4e1c8
·georget on Feb 26 2016, 16:16.
fix:unsaturated:transport_stagger multiple fixes
c009ebffe161
·georget on Feb 26 2016, 16:06.
fix:reactmicp:runner fix output when error happen
41638955a9ab
·georget on Feb 26 2016, 15:54.
impr:dfpm:solver set constant scaling factor
27eaf6dfda72
·georget on Feb 26 2016, 15:49.
feat:unsaturated:hdf5:analyser find pH
a38c724e3626
·georget on Feb 26 2016, 15:47.

Historydevd932ef871dd35717310377f…

Apr 11 2016

Apr 10 2016

Apr 9 2016

Apr 7 2016

Apr 6 2016

Apr 4 2016

Apr 1 2016

Mar 31 2016

Mar 28 2016

Mar 25 2016

Mar 24 2016

Mar 21 2016

Mar 20 2016

Mar 19 2016

Mar 18 2016

Mar 17 2016

Mar 16 2016

Mar 14 2016

Mar 13 2016

Mar 11 2016

Mar 10 2016

Mar 7 2016

Mar 6 2016

Mar 2 2016

Feb 29 2016

Feb 26 2016

History
devd932ef871dd35717310377f…