Diffusion SpecMiCP / ReactMiCP (master) History

specmicp/CMakeLists.txt
masteraa2cfcd016e3df71e377221…

Mar 17 2015

Add a runner class for the reactive transport solver
a1bb082f067b
·fabien on Mar 17 2015, 15:45.
Add and improve functions in the io library
941766fc8a67
·fabien on Mar 17 2015, 15:33.

Feb 27 2015

update Cmakelist, better treatments of compilation flags
a7efb1b1706d
·fabien on Feb 27 2015, 18:16.
Add a simple io library to output data
bf7a37fc71e9
·fabien on Feb 27 2015, 17:36.
Add a simple timer class
10ab4cafbaa0
·fabien on Feb 27 2015, 17:32.

Feb 26 2015

Add a generic 1D mesh, issue #13
339c6d31875f
·fabien on Feb 26 2015, 04:09.

Feb 25 2015

add an adaptative timestepper algorithm
e403516d3274
·fabien on Feb 25 2015, 22:05.

Feb 17 2015

add the pcfm methods in the CMakeList.txt file
7ce05df64442
·fabien on Feb 17 2015, 04:51.

Feb 16 2015

externalize the dof numberign of the AdimensionalSystem, so it can be used by…
31d88c30dde8
·fabien on Feb 16 2015, 15:46.

Feb 11 2015

Add the database for the MoMas benchmark, maybe use for other test too
965036a9c569
·fabien on Feb 11 2015, 14:56.

Feb 10 2015

add kinetics solver for the AdimensionalSystem (issue #15), TO TEST
a388607362fe
·fabien on Feb 10 2015, 02:18.

Feb 6 2015

remove unused struct from saturated_react
a0d7a916d1a1
·fabien on Feb 6 2015, 20:45.

Feb 5 2015

add a generic Axisymmetric 1D mesh class, in process of resolving issue #13
113faa16267a
·fabien on Feb 5 2015, 21:11.

Jan 17 2015

modify the sparse solver module to resolve issue #11
a247fbc100c4
·fabien on Jan 17 2015, 22:34.

Jan 16 2015

Improve/clean cmakelist, list requirements/options in INSTALL
4bf2553e54f6
·fabien on Jan 16 2015, 16:34.

Jan 12 2015

Start the work on the new SaturatedDiffusion systems for the new reactive…
3c484d96fa9b
·fabien on Jan 12 2015, 17:05.

Jan 9 2015

Improve reactive transport solver
6f21451dd340
·fabien on Jan 9 2015, 22:05.
add foundations of the flexible reactive transport solver
a19ce13e1a11
·fabien on Jan 9 2015, 17:45.

Dec 12 2014

add coupler, extractor for equilibrium
4adc6181a531
·fabien on Dec 12 2014, 19:42.

Dec 9 2014

add src/dfpm/types.hpp in sources
8caac4f45779
·fabien on Dec 9 2014, 05:00.

Dec 7 2014

add the dfpm module, generic finite volume module, move meshes to dfpm
511a07d7f37c
·fabien on Dec 7 2014, 20:50.

Dec 5 2014

Add EquilibriumCurve, base class to create ReactionPath model
d442c9ff39a3
·fabien on Dec 5 2014, 22:16.

Dec 2 2014

add AdimensionalSystemOptions, like ReducedSystemOptions
0b629aa5b824
·fabien on Dec 2 2014, 19:47.

Dec 1 2014

add options for reduced system
96b7b4f73361
·fabien on Dec 1 2014, 17:38.
add a class to compute exponential moving average
bc007865d143
·fabien on Dec 1 2014, 17:33.

Nov 22 2014

Add AdimensionnalSystemSolutionExtractor
1449c5f7ed20
·fabien on Nov 22 2014, 19:24.

Nov 20 2014

add solver for Adimensional system and Dissolver, to set up problem
d1998e3678d3
·fabien on Nov 20 2014, 02:41.

Nov 19 2014

rename adim into adimensional system
e2078e2d32ae
·fabien on Nov 19 2014, 16:42.

Nov 18 2014

implementation of adimensional system and test
477470dc6bc8
·fabien on Nov 18 2014, 23:54.

Nov 13 2014

add support for gmres in sparse_solver module
f67b525bf55f
·fabien on Nov 13 2014, 00:55.
correct boost include dir varaibles in CMakelist.txt
8d8999e139be
·fabien on Nov 13 2014, 00:47.
Add PerformanceHandler on the model of OptionsHandler
a4f20df9b49f
·fabien on Nov 13 2014, 00:46.
rename file containing the reactive transport solver options
25b4a7a686ca
·fabien on Nov 13 2014, 00:45.

Nov 11 2014

Update Cmakelist, easier to compile in ohter system (i.e. denali)
2763d88b9342
·fabien on Nov 11 2014, 21:58.

Nov 7 2014

add base class to handle options
d6ddcf0a9bd2
·fabien on Nov 7 2014, 18:58.

Oct 28 2014

start implementing kinetics solver
2f65d5a63c08
·fabien on Oct 28 2014, 20:44.

Oct 26 2014

move and try improving sparse solver tools
b86528d727b5
·fabien on Oct 26 2014, 00:03.

Oct 25 2014

add reactive transport neutrality solver, and update transport program and the…
6d08d8744732
·fabien on Oct 25 2014, 22:31.

Oct 20 2014

add electroneutrality transport program
ab2944bc8002
·fabien on Oct 20 2014, 23:03.

Oct 9 2014

reduce header dependancy
9ac10ec69a99
·fabien on Oct 9 2014, 04:39.

Oct 8 2014

add example directory
da3d68efcce0
·fabien on Oct 8 2014, 22:06.
add axissymmetric mesh 1d, one file per mesh, add reactmicp/mesh.hpp
a3fe40ba7210
·fabien on Oct 8 2014, 20:19.

Oct 6 2014

add common.hpp, modify database module to use it
eb7779e20fdf
·fabien on Oct 6 2014, 15:30.

Oct 3 2014

add cmakefile in directory test
191d56f41074
·fabien on Oct 3 2014, 16:28.
remove unecessary files
e5484eae1665
·fabien on Oct 3 2014, 00:36.

Sep 28 2014

start working on BCs and ther applications
49aeec52193c
·fabien on Sep 28 2014, 23:38.
update and coupling utils in SIASaturatedVariables
a68894083238
·fabien on Sep 28 2014, 20:16.

Sep 26 2014

dfpmsolver, and saturated_diffusion program can be solved
8342bd67907c
·fabien on Sep 26 2014, 02:27.

Sep 25 2014

start working on SIA solver
b5fde6377526
·fabien on Sep 25 2014, 05:00.

Sep 11 2014

MiCPParabolicSolver runs, does not solve anything
8659642b7a98
·fabien on Sep 11 2014, 22:49.

Sep 10 2014

correction of bugs due to merging, also use new database range_* function in…
141e6db490b4
·fabien on Sep 10 2014, 03:54.
add the main diffusion system
d01a0c53637d
·fabien on Sep 10 2014, 02:12.
introducing DiffusionSecondary for activity coefficient and concentration of…
f1b23f04d9ad
·fabien on Sep 10 2014, 02:12.
move and improve equation numbering for diffusion reactive transport system
e0f20360e06e
·fabien on Sep 10 2014, 02:12.
bug correction for diffusion system
54f4e1c465c9
·fabien on Sep 10 2014, 02:12.
first commit on branch reactivetransport
b1dec92efd3e
·fabien on Sep 10 2014, 02:12.

Sep 7 2014

first commit to cython branch, start interface for database
cc762abbb0d9
·fabien on Sep 7 2014, 05:20.

Sep 5 2014

reintroduce the old solver, for a ~working min solver
54f50e62ff4b
·fabien on Sep 5 2014, 19:25.

Aug 19 2014

general documentation
f58dc561296c
·fabien on Aug 19 2014, 15:37.

Aug 18 2014

cleaning not working gasphase in reduce_system
2555d4790cc7
·fabien on Aug 18 2014, 16:23.
after a long absence, start cleaning
768489c0ad3e
·fabien on Aug 18 2014, 16:07.

Jun 17 2014

start implementing the fixed volume problem
9320d65b0bd7
·georget on Jun 17 2014, 22:31.
separate common laws, constant and unit conversion in their own files
191e81a7b47a
·georget on Jun 17 2014, 22:29.
add some constants and trivial laws
4d7d50dc1a4f
·georget on Jun 17 2014, 15:47.

Jun 5 2014

add support for molar volume of minerals
9bb9fb95bbcf
·georget on Jun 5 2014, 17:24.

Jun 4 2014

add EquilibriumState to store and manage solution of equilibrium computation
36b376748b48
·georget on Jun 4 2014, 19:40.
add test to develop kinetics
7534f1230322
·georget on Jun 4 2014, 15:11.

May 29 2014

start inplementing ode integrator
f71ccdc1dc33
·georget on May 29 2014, 20:09.

May 20 2014

add example that computes supersaturation of C3S to obtain the kinetic rate…
83765d524169
·georget on May 20 2014, 15:47.

May 15 2014

add a simulation of alkali activated cement - just a POC for now
d687b3784285
·georget on May 15 2014, 20:43.

May 3 2014

remove extended system and min function support in micpsolver
843229b1b8a7
·georget on May 3 2014, 22:34.

Apr 30 2014

Add database module to keep only some minerals in equilibrium computation
68d4d285bf5e
·georget on Apr 30 2014, 19:59.
add base class for database modules
fe85b199d55b
·georget on Apr 30 2014, 17:44.

Apr 29 2014

add min-FB linesearch arlgorithm - does not work
98612e6c3e19
·georget on Apr 29 2014, 19:54.

Apr 25 2014

Prepare the new min micpsolver
9ae71fb529cc
·georget on Apr 25 2014, 18:44.

Apr 18 2014

modify thermocarbo, add carboalu
371ef7b904c2
·georget on Apr 18 2014, 23:25.

Apr 10 2014

move canonicalization and basis_switching to their own class, Database call…
2a2c40048cee
·georget on Apr 10 2014, 00:16.

Apr 9 2014

add ReactionPathDriver - able to run
98ef97febe79
·georget on Apr 9 2014, 23:12.
Add the class ReducedSystemSolver, interface to solve a ReducedSystem
26d44083fef7
·georget on Apr 9 2014, 21:16.
separate struct and enum used by MiCPSolver in a different header
50a966577063
·georget on Apr 9 2014, 20:08.
database selector - remove components from the basis
a293c41b2539
·georget on Apr 9 2014, 16:55.

Apr 8 2014

a new reduced system, don't solve explicitely for secodnary aqueous…
a19cea4818a7
·georget on Apr 8 2014, 21:15.

Apr 7 2014

move specmicp to extended_system
a29e40517129
·georget on Apr 7 2014, 19:47.
Documentations : citations and update
c551311e303e
·georget on Apr 7 2014, 00:55.

Apr 6 2014

add database management - reducing to canonical form and swap basis
4d14a2cc5b7e
·georget on Apr 6 2014, 20:55.
new database
e12fbdcee6a7
·georget on Apr 6 2014, 20:55.

Apr 5 2014

add database
0ee505a85b4c
·georget on Apr 5 2014, 20:54.
Documentation
89f89d5696f6
·georget on Apr 5 2014, 18:21.

Apr 4 2014

logger
dcc601639650
·georget on Apr 4 2014, 23:49.

Mar 26 2014

start work on specmicp
76b655f10c49
·georget on Mar 26 2014, 23:34.
micpsolver almost working
bcec4af7755f
·georget on Mar 26 2014, 00:23.

Mar 25 2014

implementation of MiCPsolver continue
19b2506fec1c
·georget on Mar 25 2014, 20:49.
start work on micp solver
d9b77d2dcb0a
·georget on Mar 25 2014, 19:07.
first commit - start work on MiCP solver
aa99981ed3b1
·georget on Mar 25 2014, 17:24.