Diffusion tamaas (master) History

History
master6ae2bd3ffe9241700637e6e…

Aug 4 2021

Merge branch 'master' into features/netcdf-mpi
6ae2bd3ffe92
·branch: features/netcdf-mpi
·frerot on Aug 4 2021, 19:59.
added a `--version` flag to the tamaas command
5871c9edfbdb
·frerot on Aug 4 2021, 19:58.

Jul 23 2021

[doc] reformatting lists in rst files
a4e90af9ca72
·frerot on Jul 23 2021, 20:42.
pinned sphinx & friends versions
93fd09752bd7
·frerot on Jul 23 2021, 17:45.

Jul 20 2021

[ci] correcting build artifacts
dc9656d4c667
·frerot on Jul 20 2021, 22:22.
[ci] correct build artifacts
b86675be3c88
·frerot on Jul 20 2021, 22:10.
[ci] using quotes
abe5af88a8fd
·frerot on Jul 20 2021, 22:02.
[ci] corrected yaml syntax
d94480026e78
·frerot on Jul 20 2021, 21:18.
added linting with clang-tidy & lint corrections
ad9b3ca44951
·frerot on Jul 20 2021, 21:15.
fixed changelog
9b9d67c5e9e6
·frerot on Jul 20 2021, 16:20.
[ci] using quotes
483b0d63989b
·frerot on Jul 20 2021, 14:45.
[ci] inverting exit code on flake test
f7cd9080a63f
·frerot on Jul 20 2021, 05:01.
[ci] using flake8 from pypi instead of debian
924196b3e6c3
·frerot on Jul 20 2021, 02:10.
[ci] using flake8 for linting of python code
7eab7018c9f3
·frerot on Jul 20 2021, 01:33.
[ci] printing clang-format diff to stdout
38f079f2e407
·frerot on Jul 20 2021, 00:25.
[ci] corrected bash syntax error
21382de51f3b
·frerot on Jul 20 2021, 00:18.
[ci] adding clang-format patch as artifact
b605084b4308
·frerot on Jul 20 2021, 00:09.

Jul 19 2021

[ci] using debian image for linting
9a360c12e700
·frerot on Jul 19 2021, 23:58.
[ci] added linting step with clang-format
f5a49115e55d
·frerot on Jul 19 2021, 23:51.

Jul 15 2021

removed the `use_googletest` build option
a3ffe31ab0e6
·frerot on Jul 15 2021, 23:51.
removing `build_doc` build option
342a305cd8e5
·frerot on Jul 15 2021, 23:33.
linting wrapper
9954206dc53e
·frerot on Jul 15 2021, 17:47.

Jul 14 2021

more linting mods
4d76b041198e
·frerot on Jul 14 2021, 23:51.

Jul 12 2021

applying linting modifications
d92dd3888b13
·frerot on Jul 12 2021, 16:33.

Jul 6 2021

corrections to CHANGELOG
f3a563c654e0
·frerot on Jul 6 2021, 20:35.
using json to dump model attributes in NumpyDumper
0347e231c864
·frerot on Jul 6 2021, 17:16.

Jun 30 2021

testing real and integer types at configure
37817268dbc0
·frerot on Jun 30 2021, 21:58.

Jun 25 2021

corrected description in setup.py
2d5f6817fb8e
·tag: v2.3.0.post1
·frerot on Jun 25 2021, 04:19.
restored root Dockerfile which now install Tamaas automatically
fcc82b958c8a
·frerot on Jun 25 2021, 01:31.

Jun 24 2021

[ci] setting env variables for ccache compilers
60bf8492d01b
·frerot on Jun 24 2021, 03:09.
[ci] corrected yaml syntax
25a7b95e4cfc
·frerot on Jun 24 2021, 00:40.
[ci] cache pytest, last failed test exec order => fail early
dd1b731c3f45
·frerot on Jun 24 2021, 00:33.
[ci] proper cache key
20fb01613949
·frerot on Jun 24 2021, 00:17.

Jun 23 2021

[ci] explicitely installing openmpi in debian image
707ca84943d3
·frerot on Jun 23 2021, 23:22.
[ci] always uploading compilation and test artifacts
9421431b93ad
·frerot on Jun 23 2021, 23:12.
[ci] spec for docker images
011b7986cf9d
·frerot on Jun 23 2021, 22:04.
[ci] added pip back in docker images
5b7fb80198a4
·frerot on Jun 23 2021, 21:40.
[ci] enabling compilation cache
80cd543380a8
·frerot on Jun 23 2021, 21:35.

Jun 22 2021

[doc] updated doc description in README
a9820b3647a0
·frerot on Jun 22 2021, 04:59.
[doc] telling readthedocs to use tamaas wheels from gitlab
811941e48912
·frerot on Jun 22 2021, 02:42.

Jun 16 2021

Merge branch 'master' into features/netcdf-mpi
c9c88c9137db
·frerot on Jun 16 2021, 03:04.
[ci] using docker image from default branch as cache
0153f66ec98a
·frerot on Jun 16 2021, 03:04.
[ci] always build docker images with cache
f80ca9e58581
·frerot on Jun 16 2021, 02:55.
[ci] consistent rules for deploy jobs
f0c16040dd28
·frerot on Jun 16 2021, 02:33.
Merge branch 'master' into features/netcdf-mpi
f815d803f869
·frerot on Jun 16 2021, 02:06.

Jun 15 2021

[ci] correct verbose flag for twine
f9a64f324845
·tag: v2.3.0
·frerot on Jun 15 2021, 22:18.
[ci] only deploying wheels when tests are passing
fe4baf6011aa
·frerot on Jun 15 2021, 21:51.
[ci] activate wheels build on tag
05b51c6db299
·frerot on Jun 15 2021, 21:28.
[ci] moving wheels step to build
dd5bfe56473c
·frerot on Jun 15 2021, 20:14.
[ci] setup continuous delivery
a26e113c41ca
·frerot on Jun 15 2021, 18:54.

Jun 11 2021

[ci] keeping tests logs
96560b231bb5
·frerot on Jun 11 2021, 22:21.
migrated repository to gitlab
79355c2aefe7
·frerot on Jun 11 2021, 21:08.

Jun 10 2021

[ci] fixed wrongly placed post{} + cleanup
e9062e2f90fd
·frerot on Jun 10 2021, 23:45.
cleaned up license headers
1fc7644bad52
·frerot on Jun 10 2021, 22:30.
[ci] indentation
f4302c1266be
·frerot on Jun 10 2021, 00:07.

Jun 9 2021

[ci] removed node
e51cb6a111e9
·frerot on Jun 9 2021, 23:32.
[ci] moved node in stages
d6be11d5e367
·frerot on Jun 9 2021, 23:29.
[ci] trying to use nodes
468043414b64
·frerot on Jun 9 2021, 23:26.
[ci] always upload artifacts
f3a409f8261b
·frerot on Jun 9 2021, 23:22.
[ci] changed hbm command names
ae683ba73eaa
·frerot on Jun 9 2021, 22:37.
[ci] restablished debian image for docker
9fe244aa2311
·frerot on Jun 9 2021, 22:17.
[ci] logging and archiving test results
a53ea126d89c
·frerot on Jun 9 2021, 19:30.
[ci] added libopenmpi-dev to docker image
e54b07ea498d
·frerot on Jun 9 2021, 18:20.
stop compile if basic checks are not satisfied
abfdd8cd28b0
·frerot on Jun 9 2021, 18:09.
[ci] trying different technique to save artifacts
63dab2b443c2
·frerot on Jun 9 2021, 18:04.
[ci] also saving artifacts in jenkins
dd81cd4ff6c0
·frerot on Jun 9 2021, 17:59.
[ci] correct subcommands names
ecc1eaeea050
·frerot on Jun 9 2021, 17:52.
trying to fix jenkins by fixing dependency resolution order and locales
249346cbbecf
·frerot on Jun 9 2021, 17:48.
[doc] using full `numpy` name instead of `np`
1ab45bfb8b10
·frerot on Jun 9 2021, 17:31.
added more docstrings
e76bb9e66413
·frerot on Jun 9 2021, 17:26.
using a cuda-enabled docker image
b4f0f816450c
·frerot on Jun 9 2021, 16:36.
added docstrings to some python function bindings
1de4d8b950ca
·frerot on Jun 9 2021, 16:35.

Jun 2 2021

compiling tests with cuda
de1480b0e7ae
·frerot on Jun 2 2021, 20:39.

Jun 1 2021

correctly computing contact area in mpi context
cdc6ac1a08f9
·frerot on Jun 1 2021, 00:04.

May 31 2021

corrected includes for cpp tests
3d1b4c64338f
·frerot on May 31 2021, 16:55.
re-established sort order for eigenvalues
c36392a99574
·frerot on May 31 2021, 16:54.

May 29 2021

removing remnants of fftw's interface
fd9661c88813
·frerot on May 29 2021, 20:36.
added experimental cuda warning
7faf5c9d3692
·frerot on May 29 2021, 20:13.

May 28 2021

not linking against fftw if cuda is used
0ae1a96db417
·frerot on May 28 2021, 22:59.
reorganized fftw files in their own directory
d1dc26e4556a
·frerot on May 28 2021, 21:31.
cosmetic changes to compile command output
4f55fed67f6d
·frerot on May 28 2021, 19:56.
Merge branch 'master' into features/cuda
fde6a532b8a1
·frerot on May 28 2021, 19:40.
always compiling mpi_interface.cpp
2baa944ac358
·frerot on May 28 2021, 19:40.
making the whole library compile with cuda
0257e3cb2f4e
·frerot on May 28 2021, 17:15.
fft engine for cuda
6b9140c22c9b
·frerot on May 28 2021, 05:39.

May 27 2021

more progress to have tamaas compile with nvcc
cb90433efaab
·frerot on May 27 2021, 22:23.

May 26 2021

[doc] spacing bullet list items
12d9012653a6
·frerot on May 26 2021, 18:26.
removing dirty tag in sphinx version string
5a30f4e328d1
·frerot on May 26 2021, 16:16.

May 25 2021

ensuring uniform surface generator seed accross processes
7e692627014a
·frerot on May 25 2021, 18:14.

May 19 2021

more compatibility with cuda
0f189d10cd98
·frerot on May 19 2021, 21:54.
manually sorting eigenvalues instead of thrust::sort
31f5a4526a6e
·frerot on May 19 2021, 20:14.
using cuda-compatible exchange function instead of std::exchange
c159445c87fb
·frerot on May 19 2021, 20:14.
avoiding pointless comparison with 0 warning
227f8de0a319
·frerot on May 19 2021, 20:13.
__device__, __host__, CUDA_LAMBDA annotations
b2df7a0d87de
·frerot on May 19 2021, 20:12.
compatibility changes to cuda in scons
c75736b11338
·frerot on May 19 2021, 20:10.

May 17 2021

[doc] fixed typo
7d0f66532e72
·frerot on May 17 2021, 20:44.
white background on icon
465a89c730fa
·frerot on May 17 2021, 20:30.

May 13 2021

displaying log level + debug logs in tamaas.cpp
751788025682
·frerot on May 13 2021, 21:50.

May 12 2021

removed useless submodule
baa09fd29fec
·frerot on May 12 2021, 18:26.

May 10 2021

refreshed README
4d5ce89278a3
·frerot on May 10 2021, 22:02.

Historymaster6ae2bd3ffe9241700637e6e…

Aug 4 2021

Jul 23 2021

Jul 20 2021

Jul 19 2021

Jul 15 2021

Jul 14 2021

Jul 12 2021

Jul 6 2021

Jun 30 2021

Jun 25 2021

Jun 24 2021

Jun 23 2021

Jun 22 2021

Jun 16 2021

Jun 15 2021

Jun 11 2021

Jun 10 2021

Jun 9 2021

Jun 2 2021

Jun 1 2021

May 31 2021

May 29 2021

May 28 2021

May 27 2021

May 26 2021

May 25 2021

May 19 2021

May 17 2021

May 13 2021

May 12 2021

May 10 2021

History
master6ae2bd3ffe9241700637e6e…