Diffusion tamaas (petsc) History

History
petsc97cbaba6111fb72b1474365…

Mar 23 2018

fixed build bug of link of _tamaas.so happening too early
97cbaba6111f
·frerot on Mar 23 2018, 18:14.
fixed repeat solve bug + corrupt fft plans bug [temp fix]
ba6c1de7c812
·frerot on Mar 23 2018, 17:37.

Mar 22 2018

fixed segmentation fault when adding adhesion functionals
fb9337f5e5e1
·frerot on Mar 22 2018, 10:06.
added possibility to extend filter class in python
fb6384b7bf0f
·frerot on Mar 22 2018, 09:55.

Mar 21 2018

rewrote GridView for contiguous data + test of wavevectors generation
b1d76079b6e0
·frerot on Mar 21 2018, 16:15.

Mar 20 2018

wrapping missing methods in core (Statistics)
8bfd968b3faa
·frerot on Mar 20 2018, 15:50.

Mar 19 2018

Merge branch 'master' of ssh://c4science.ch/source/tamaas
62630d8b3b33
·frerot on Mar 19 2018, 18:05.
extracted tamaas tool for scons
c3ae6218f7fe
·frerot on Mar 19 2018, 18:05.
checking existence of mercurial for clone of doxygen scons tool
3ecd8d1f64eb
·frerot on Mar 19 2018, 17:45.
changed Model pointer for construction of VEEngines
42b925e8ef4c
·frerot on Mar 19 2018, 17:44.

Mar 16 2018

added kelvin class
0158bc7fc227
·frerot on Mar 16 2018, 19:50.
layed out structure for Mindlin integral operators
f03ad955dcac
·frerot on Mar 16 2018, 17:58.
some cleanup
e722836a68b2
·frerot on Mar 16 2018, 16:06.
made FFTPlanManager singleton a std::unique_ptr
6e637d24b807
·frerot on Mar 16 2018, 15:46.
some c++11 conversion
e5a735859e62
·frerot on Mar 16 2018, 15:35.
removed 3D ffts (so cuda may compile)
ed49f86e5be2
·frerot on Mar 16 2018, 15:32.

Mar 15 2018

made surface model type compile on cuda
2cb504f747bd
·frerot on Mar 15 2018, 14:00.

Mar 14 2018

updated readme
b4e70af5ffc9
·frerot on Mar 14 2018, 18:54.
fixed 'should_configure' error
182d02bee2b6
·frerot on Mar 14 2018, 18:45.
better scons behavior in clean and help modes
2c3abe39d43e
·frerot on Mar 14 2018, 18:38.
error message when mercurial not installed
6fa131b04b22
·frerot on Mar 14 2018, 18:37.
maded cuda play nice with googletest
0086712f9e0b
·frerot on Mar 14 2018, 17:06.
added back python tests
f0ca11033737
·frerot on Mar 14 2018, 15:23.
removed Criterion
5a7253d95793
·frerot on Mar 14 2018, 15:16.
proper detection of pybind11 and GTest
4eec140f3be0
·frerot on Mar 14 2018, 14:15.
passed old Criterion tests to GTest
c6e9038c3415
·tag: googletest
·frerot on Mar 14 2018, 13:46.
added gtest compilation step
cfd9dc62d7c7
·frerot on Mar 14 2018, 12:16.
adding googletest as submodule
dfc28d1cd0d3
·frerot on Mar 14 2018, 10:21.

Mar 13 2018

updated readme
1405645ecdf5
·frerot on Mar 13 2018, 15:40.
updated examples
30a8e41e2507
·frerot on Mar 13 2018, 15:35.
made it possible to inherit Functional class in python
d39acbc1cd9e
·frerot on Mar 13 2018, 14:45.
forgot one CUDA_LAMBDA
030d7204596f
·tag: pybind
·frerot on Mar 13 2018, 08:59.

Mar 12 2018

fixed warning for cuda
0cd483eb65aa
·frerot on Mar 12 2018, 17:09.
color consistency
df2209a6db33
·frerot on Mar 12 2018, 16:56.

Mar 8 2018

fixed memory errors + restored compatibility
cd034e49e5c8
·frerot on Mar 8 2018, 18:58.
wrapping adhesion functionals
24c86549be3e
·frerot on Mar 8 2018, 16:00.

Mar 7 2018

removed swig (swig is DEAD! let us sing on its corpse!)
9653f874d0f6
·frerot on Mar 7 2018, 17:48.
wrapping old BEM and added some comments
511f8f3f957d
·frerot on Mar 7 2018, 17:44.
potential fix to a conversion problem with GridHermitian
af94be1267cc
·frerot on Mar 7 2018, 16:53.
wrapped most of modern Tamaas
5ad7e31c1c5e
·frerot on Mar 7 2018, 16:22.
added type casters for pybind11
4ef018c79b67
·frerot on Mar 7 2018, 14:09.

Mar 6 2018

passing the flood fill test
b7c8f6979d6b
·frerot on Mar 6 2018, 16:28.
wrapping percolation module
c46ef4573c24
·frerot on Mar 6 2018, 16:24.

Mar 5 2018

modified tests for possible use with pytest
0ec7072aaca3
·frerot on Mar 5 2018, 15:58.
added pybind11 as submodule
ff8558d8ee66
·frerot on Mar 5 2018, 13:28.
moved to shared_ptr for meta functional list elements
f394931cca31
·frerot on Mar 5 2018, 13:06.
fixed PKR algo for adhesion
0733646b1821
·frerot on Mar 5 2018, 11:22.

Mar 2 2018

running adhesion example, but problem with final state of solution
99e8b8cff2f4
·frerot on Mar 2 2018, 18:10.

Mar 1 2018

porting adhesion functionals to new code
3b4e6d404c40
·frerot on Mar 1 2018, 18:39.
uniform compilation strings
1689544e691c
·frerot on Mar 1 2018, 16:26.

Feb 27 2018

fix to swig scons tool for docker image
cbc6fc6b1827
·frerot on Feb 27 2018, 17:41.
added option to not use criterion
35111e94f46c
·frerot on Feb 27 2018, 14:54.

Dec 13 2017

fixing tests not passing with python 3.6
33f3286cfb96
·frerot on Dec 13 2017, 14:54.
making everything work on my new system
965538b78f0d
·frerot on Dec 13 2017, 14:49.
fixed leak on model in test_rough_surface
b5577c4d3177
·frerot on Dec 13 2017, 14:47.

Nov 29 2017

suppressed some compile errors with nvcc
05cb094fac6a
·frerot on Nov 29 2017, 10:59.

Nov 23 2017

simplification of influence functions code
73dd359ecbfa
·frerot on Nov 23 2017, 12:00.
silencing clang warning
093aa6e808c1
·frerot on Nov 23 2017, 09:24.

Nov 17 2017

added the c++ example in the tests
b95e216370ff
·frerot on Nov 17 2017, 16:23.
updated readme
d8140232cb87
·frerot on Nov 17 2017, 11:32.
recursive apply functor implementation
e88936f5d0fd
·frerot on Nov 17 2017, 10:35.
clang-format on test_model + removed adhesion test from SConscript
2805b1e8fc1f
·frerot on Nov 17 2017, 10:35.
removed unused gpu submodule
ee68e10030dc
·frerot on Nov 17 2017, 10:34.

Nov 16 2017

checking preprocessor header from boost
4a8b7c6bacb3
·frerot on Nov 16 2017, 17:06.
removed adhesion test
48c7fd255339
·frerot on Nov 16 2017, 17:05.
error on cuda + sanitizer
0caaf57a09c8
·frerot on Nov 16 2017, 13:38.

Nov 15 2017

Merge branch 'gpu'
94553e902cb7
·tag: thrust-gpu
·frerot on Nov 15 2017, 17:22.
clearer moments code
d01e5c973ef6
·frerot on Nov 15 2017, 17:08.
added computation of moments (TODO implement correct test)
e5efef4d3c7c
·frerot on Nov 15 2017, 15:29.
minor cleanups
c80cfa59257f
·frerot on Nov 15 2017, 09:40.

Nov 14 2017

correct handling of gradient conditions in PKR
67e961750934
·frerot on Nov 14 2017, 17:36.

Nov 10 2017

updated c++ example
f52d1730a909
·frerot on Nov 10 2017, 16:53.
cleanup useless tests
1003d4e2f177
·frerot on Nov 10 2017, 15:35.
updated readme
67ca4e44cdeb
·frerot on Nov 10 2017, 15:19.
updated readme
166723b40ead
·frerot on Nov 10 2017, 15:18.

Nov 9 2017

clang-format
84f3f89f4f46
·frerot on Nov 9 2017, 14:32.
cleanup + compatibility with clang
bbd990f626b4
·frerot on Nov 9 2017, 14:14.
changed iterator tag to allow thrust algos on device
6fd8e54c11a4
·frerot on Nov 9 2017, 12:59.
saner code (const-correctness + defaults)
9f1e91288a10
·frerot on Nov 9 2017, 11:58.
removed warning
a1637da8edd6
·frerot on Nov 9 2017, 11:56.
clarifying side effects in functionals
b6fe91b593c4
·frerot on Nov 9 2017, 11:09.

Nov 7 2017

added cudaDeviceSynchronize in fft interface
81dd5f04e1bc
·frerot on Nov 7 2017, 16:32.
removed -f options in debug flags for cuda
4c505a4941b5
·frerot on Nov 7 2017, 16:32.
Merge branch 'thrust' of castor.epfl.ch:tamaas into thrust
3a9bbee27fb6
·frerot on Nov 7 2017, 16:24.
added synchronize for fft test
7405d7fd0275
·frerot on Nov 7 2017, 16:22.

Nov 6 2017

added target names {tamaas, wrapper, tests} for scons
a5bb7bf0d05a
·frerot on Nov 6 2017, 16:10.
added target names {tamaas, wrapper, tests} for scons
164d866440c2
·frerot on Nov 6 2017, 11:30.

Nov 5 2017

using instead of typdefs in iterators
e67ad1441169
·frerot on Nov 5 2017, 17:38.
passed clang-format on whole repository
3927fa639a53
·frerot on Nov 5 2017, 11:23.

Nov 3 2017

more readable array
d069f5437129
·frerot on Nov 3 2017, 17:57.
protecting allocator include
e634f0066037
·frerot on Nov 3 2017, 17:33.
adding fftw_malloc for SIMD aligned data allocation
30d402099764
·frerot on Nov 3 2017, 17:30.
device for ApplyConstructor + cudaSync
7043e94a544a
·frerot on Nov 3 2017, 17:00.
consistent apply_functor copies
88e8bc9847bf
·frerot on Nov 3 2017, 15:43.
fixing rvalue functor bug by making copy
4df748b7012f
·frerot on Nov 3 2017, 12:33.

Nov 2 2017

Merge branch 'gpu' into thrust
c6b27f90032a
·frerot on Nov 2 2017, 10:52.
added test for model and influence coeffs
dd65fd640204
·frerot on Nov 2 2017, 10:51.
added c++ tests for fft interface
f676e684c984
·frerot on Nov 2 2017, 10:30.

Nov 1 2017

rewrote loops with thrust
a0869ea06429
·frerot on Nov 1 2017, 18:14.
adding synchronize in test
53b9b1ac6cc4
·frerot on Nov 1 2017, 15:40.

Historypetsc97cbaba6111fb72b1474365…

Mar 23 2018

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Nov 1 2017

History
petsc97cbaba6111fb72b1474365…