Diffusion tamaas (petsc) History

History
petscpybind

Mar 13 2018

forgot one CUDA_LAMBDA
030d7204596f
·tag: pybind
·frerot on Mar 13 2018, 08:59.

Mar 12 2018

fixed warning for cuda
0cd483eb65aa
·frerot on Mar 12 2018, 17:09.
color consistency
df2209a6db33
·frerot on Mar 12 2018, 16:56.

Mar 8 2018

fixed memory errors + restored compatibility
cd034e49e5c8
·frerot on Mar 8 2018, 18:58.
wrapping adhesion functionals
24c86549be3e
·frerot on Mar 8 2018, 16:00.

Mar 7 2018

removed swig (swig is DEAD! let us sing on its corpse!)
9653f874d0f6
·frerot on Mar 7 2018, 17:48.
wrapping old BEM and added some comments
511f8f3f957d
·frerot on Mar 7 2018, 17:44.
potential fix to a conversion problem with GridHermitian
af94be1267cc
·frerot on Mar 7 2018, 16:53.
wrapped most of modern Tamaas
5ad7e31c1c5e
·frerot on Mar 7 2018, 16:22.
added type casters for pybind11
4ef018c79b67
·frerot on Mar 7 2018, 14:09.

Mar 6 2018

passing the flood fill test
b7c8f6979d6b
·frerot on Mar 6 2018, 16:28.
wrapping percolation module
c46ef4573c24
·frerot on Mar 6 2018, 16:24.

Mar 5 2018

modified tests for possible use with pytest
0ec7072aaca3
·frerot on Mar 5 2018, 15:58.
added pybind11 as submodule
ff8558d8ee66
·frerot on Mar 5 2018, 13:28.
moved to shared_ptr for meta functional list elements
f394931cca31
·frerot on Mar 5 2018, 13:06.
fixed PKR algo for adhesion
0733646b1821
·frerot on Mar 5 2018, 11:22.

Mar 2 2018

running adhesion example, but problem with final state of solution
99e8b8cff2f4
·frerot on Mar 2 2018, 18:10.

Mar 1 2018

porting adhesion functionals to new code
3b4e6d404c40
·frerot on Mar 1 2018, 18:39.
uniform compilation strings
1689544e691c
·frerot on Mar 1 2018, 16:26.

Feb 27 2018

fix to swig scons tool for docker image
cbc6fc6b1827
·frerot on Feb 27 2018, 17:41.
added option to not use criterion
35111e94f46c
·frerot on Feb 27 2018, 14:54.

Dec 13 2017

fixing tests not passing with python 3.6
33f3286cfb96
·frerot on Dec 13 2017, 14:54.
making everything work on my new system
965538b78f0d
·frerot on Dec 13 2017, 14:49.
fixed leak on model in test_rough_surface
b5577c4d3177
·frerot on Dec 13 2017, 14:47.

Nov 29 2017

suppressed some compile errors with nvcc
05cb094fac6a
·frerot on Nov 29 2017, 10:59.

Nov 23 2017

simplification of influence functions code
73dd359ecbfa
·frerot on Nov 23 2017, 12:00.
silencing clang warning
093aa6e808c1
·frerot on Nov 23 2017, 09:24.

Nov 17 2017

added the c++ example in the tests
b95e216370ff
·frerot on Nov 17 2017, 16:23.
updated readme
d8140232cb87
·frerot on Nov 17 2017, 11:32.
recursive apply functor implementation
e88936f5d0fd
·frerot on Nov 17 2017, 10:35.
clang-format on test_model + removed adhesion test from SConscript
2805b1e8fc1f
·frerot on Nov 17 2017, 10:35.
removed unused gpu submodule
ee68e10030dc
·frerot on Nov 17 2017, 10:34.

Nov 16 2017

checking preprocessor header from boost
4a8b7c6bacb3
·frerot on Nov 16 2017, 17:06.
removed adhesion test
48c7fd255339
·frerot on Nov 16 2017, 17:05.
error on cuda + sanitizer
0caaf57a09c8
·frerot on Nov 16 2017, 13:38.

Nov 15 2017

Merge branch 'gpu'
94553e902cb7
·tag: thrust-gpu
·frerot on Nov 15 2017, 17:22.
clearer moments code
d01e5c973ef6
·frerot on Nov 15 2017, 17:08.
added computation of moments (TODO implement correct test)
e5efef4d3c7c
·frerot on Nov 15 2017, 15:29.
minor cleanups
c80cfa59257f
·frerot on Nov 15 2017, 09:40.

Nov 14 2017

correct handling of gradient conditions in PKR
67e961750934
·frerot on Nov 14 2017, 17:36.

Nov 10 2017

updated c++ example
f52d1730a909
·frerot on Nov 10 2017, 16:53.
cleanup useless tests
1003d4e2f177
·frerot on Nov 10 2017, 15:35.
updated readme
67ca4e44cdeb
·frerot on Nov 10 2017, 15:19.
updated readme
166723b40ead
·frerot on Nov 10 2017, 15:18.

Nov 9 2017

clang-format
84f3f89f4f46
·frerot on Nov 9 2017, 14:32.
cleanup + compatibility with clang
bbd990f626b4
·frerot on Nov 9 2017, 14:14.
changed iterator tag to allow thrust algos on device
6fd8e54c11a4
·frerot on Nov 9 2017, 12:59.
saner code (const-correctness + defaults)
9f1e91288a10
·frerot on Nov 9 2017, 11:58.
removed warning
a1637da8edd6
·frerot on Nov 9 2017, 11:56.
clarifying side effects in functionals
b6fe91b593c4
·frerot on Nov 9 2017, 11:09.

Nov 7 2017

added cudaDeviceSynchronize in fft interface
81dd5f04e1bc
·frerot on Nov 7 2017, 16:32.
removed -f options in debug flags for cuda
4c505a4941b5
·frerot on Nov 7 2017, 16:32.
Merge branch 'thrust' of castor.epfl.ch:tamaas into thrust
3a9bbee27fb6
·frerot on Nov 7 2017, 16:24.
added synchronize for fft test
7405d7fd0275
·frerot on Nov 7 2017, 16:22.

Nov 6 2017

added target names {tamaas, wrapper, tests} for scons
a5bb7bf0d05a
·frerot on Nov 6 2017, 16:10.
added target names {tamaas, wrapper, tests} for scons
164d866440c2
·frerot on Nov 6 2017, 11:30.

Nov 5 2017

using instead of typdefs in iterators
e67ad1441169
·frerot on Nov 5 2017, 17:38.
passed clang-format on whole repository
3927fa639a53
·frerot on Nov 5 2017, 11:23.

Nov 3 2017

more readable array
d069f5437129
·frerot on Nov 3 2017, 17:57.
protecting allocator include
e634f0066037
·frerot on Nov 3 2017, 17:33.
adding fftw_malloc for SIMD aligned data allocation
30d402099764
·frerot on Nov 3 2017, 17:30.
device for ApplyConstructor + cudaSync
7043e94a544a
·frerot on Nov 3 2017, 17:00.
consistent apply_functor copies
88e8bc9847bf
·frerot on Nov 3 2017, 15:43.
fixing rvalue functor bug by making copy
4df748b7012f
·frerot on Nov 3 2017, 12:33.

Nov 2 2017

Merge branch 'gpu' into thrust
c6b27f90032a
·frerot on Nov 2 2017, 10:52.
added test for model and influence coeffs
dd65fd640204
·frerot on Nov 2 2017, 10:51.
added c++ tests for fft interface
f676e684c984
·frerot on Nov 2 2017, 10:30.

Nov 1 2017

rewrote loops with thrust
a0869ea06429
·frerot on Nov 1 2017, 18:14.
adding synchronize in test
53b9b1ac6cc4
·frerot on Nov 1 2017, 15:40.
test for loop interface with thrust
93055b409b13
·frerot on Nov 1 2017, 15:39.
small test of thrust capacities
209b1173d70d
·frerot on Nov 1 2017, 15:07.
passing for_each loops tests
b3c9bf19b545
·frerot on Nov 1 2017, 11:59.

Oct 31 2017

make everything compile with -G
8ef9e8b95c5b
·frerot on Oct 31 2017, 18:09.
simplified for testing
b366bc3c68d8
·frerot on Oct 31 2017, 16:58.
removing unused code
2e578b066372
·frerot on Oct 31 2017, 13:37.
getting the cuda loops to compile (return of the lambda)
2be5a950ade8
·frerot on Oct 31 2017, 13:25.
getting the cuda loops to compile
0d1eb492274b
·frerot on Oct 31 2017, 11:45.

Oct 30 2017

trying to adapt code to cuda
c952c8e72bb7
·frerot on Oct 30 2017, 16:13.
removed Loop singleton
d75a65d09d21
·frerot on Oct 30 2017, 09:19.

Oct 28 2017

added some documentation to classes
01bc15346e7f
·frerot on Oct 28 2017, 18:34.
added enumeration helper in Loop
b59fa1b6aab3
·frerot on Oct 28 2017, 18:33.

Oct 27 2017

implemented matrices for strided loops
f31c9478eeb0
·frerot on Oct 27 2017, 16:57.
added strided loops
f76320c57280
·frerot on Oct 27 2017, 16:42.

Oct 26 2017

added Statistics class
0ca44f94ddd0
·frerot on Oct 26 2017, 16:36.
added @file tag for documentation
a79f64962579
·frerot on Oct 26 2017, 11:41.
rewrote polonsky with lambda-loops
a757e2311dc9
·frerot on Oct 26 2017, 11:13.

Oct 25 2017

changed vectorial operators
68d26a7bbdf2
·frerot on Oct 25 2017, 16:56.
c++14 pulls + passing tests
095106192bbb
·frerot on Oct 25 2017, 16:08.
empty line
966c6339c964
·frerot on Oct 25 2017, 12:19.
added loop abstractions
326e0378133b
·frerot on Oct 25 2017, 11:55.

Oct 12 2017

instanciating fftransfromcufft for dims 1 and 3
de2d37bf9bc9
·frerot on Oct 12 2017, 12:58.
modified fftransformcufft for multi-component ffts
221ad73b17f3
·frerot on Oct 12 2017, 12:48.
more modular SConstruct
43e776cc945c
·frerot on Oct 12 2017, 12:15.
Merge branch 'master' into gpu
7c7191a3ac48
·frerot on Oct 12 2017, 10:55.
added detection of cuda on clusters
820a350bce9e
·frerot on Oct 12 2017, 10:52.
update copyright year in model subdir
7c7dc19567c8
·frerot on Oct 12 2017, 09:34.
added gpu to CPPPATH
8cb7ccccec28
·frerot on Oct 12 2017, 09:33.

Oct 11 2017

made tamaas compile with nvcc and custom tool
864dce59b0cf
·frerot on Oct 11 2017, 18:19.
ensure correct dependencies (by copying source)
82094210e0a8
·frerot on Oct 11 2017, 09:55.

Oct 10 2017

Merge branch 'master' of lsmssrv1.epfl.ch:tamaas
43b209bb8954
·frerot on Oct 10 2017, 18:00.

Historypetscpybind

Mar 13 2018

Mar 12 2018

Mar 8 2018

Mar 7 2018

Mar 6 2018

Mar 5 2018

Mar 2 2018

Mar 1 2018

Feb 27 2018

Dec 13 2017

Nov 29 2017

Nov 23 2017

Nov 17 2017

Nov 16 2017

Nov 15 2017

Nov 14 2017

Nov 10 2017

Nov 9 2017

Nov 7 2017

Nov 6 2017

Nov 5 2017

Nov 3 2017

Nov 2 2017

Nov 1 2017

Oct 31 2017

Oct 30 2017

Oct 28 2017

Oct 27 2017

Oct 26 2017

Oct 25 2017

Oct 12 2017

Oct 11 2017

Oct 10 2017

History
petscpybind