Diffusion tamaas (petsc) History

tamaas/python
petscda328e82b2282c4dfe46cab…

Mar 1 2019

added register field to python interface
da328e82b228
·frerot on Mar 1 2019, 11:01.

Feb 27 2019

adding build_type to the python module
6272072c37e9
·frerot on Feb 27 2019, 11:26.

Feb 26 2019

added computation of perimeter in flood fill
ecb096dd34da
·frerot on Feb 26 2019, 15:25.
better memory management of filters + better tests
e7c9f396158e
·frerot on Feb 26 2019, 10:46.

Feb 25 2019

adding regularized surface spectrum
be78e2255e2b
·frerot on Feb 25 2019, 11:37.

Feb 22 2019

after two years, I have fixed the surface statistics !
03b3153e4183
·frerot on Feb 22 2019, 18:04.

Feb 20 2019

checking compilation with clang
b8c5b516912e
·frerot on Feb 20 2019, 11:11.

Feb 13 2019

better management of dependencies between scons targets
a6c60077067c
·frerot on Feb 13 2019, 17:29.

Feb 12 2019

added hdf5 dumper
744f0918bc36
·frerot on Feb 12 2019, 15:58.

Feb 11 2019

fixed return type on model::__getitem__
4041f833e795
·frerot on Feb 11 2019, 17:29.
updated README and examples
fa16f5a64b1f
·frerot on Feb 11 2019, 17:03.

Feb 7 2019

added tolerance as property in ScipySolver
f058f6fb8b03
·frerot on Feb 7 2019, 15:41.

Feb 6 2019

modified some model behavior for voigt notation (WIP)
c23abaf90bd2
·frerot on Feb 6 2019, 13:59.
added respect of return value policies in grid typecasting
824b13fd0599
·frerot on Feb 6 2019, 13:23.

Jan 17 2019

minor adds to setup.py
cb32d6d45bec
·frerot on Jan 17 2019, 12:35.

Jan 15 2019

fixed error with tolerance manager
c5bd6d7e54b2
·frerot on Jan 15 2019, 17:07.
non-linear solvers use only absolute tolerance by default
ff0d88210c6e
·frerot on Jan 15 2019, 13:13.
added relaxation parameter as member of EPICSolver
d9274768fd3c
·frerot on Jan 15 2019, 13:13.

Jan 14 2019

added callback to nonlinear solvers
92c57f5a6959
·frerot on Jan 14 2019, 11:44.

Dec 6 2018

added skeleton for netcdf dumper
a7407197cf9b
·frerot on Dec 6 2018, 15:49.

Dec 5 2018

const correctedness of model dumper and integral op methods
e133c2920e0a
·frerot on Dec 5 2018, 11:47.

Nov 19 2018

added get points for cluster
9e11e6f1d3f0
·frerot on Nov 19 2018, 14:45.

Nov 14 2018

added shift operator to dumpers
675ebdccdcb0
·frerot on Nov 14 2018, 17:36.

Nov 9 2018

newton krylov compliant with tolerance manager
d292342ff7b8
·frerot on Nov 9 2018, 10:37.

Nov 1 2018

added decorators for dumpers
83067095d273
·frerot on Nov 1 2018, 14:41.

Oct 31 2018

added tolerance manager decorator for dfsane solver
bf00d1585d7e
·frerot on Oct 31 2018, 18:53.

Oct 29 2018

[TEMP] modifications for stability of EPIC solver
0a3d028d00c9
·frerot on Oct 29 2018, 11:28.

Oct 27 2018

reorganized solvers
797f71620eb8
·frerot on Oct 27 2018, 18:43.

Oct 25 2018

simplified dumper implementation
fdb103752c5e
·frerot on Oct 25 2018, 15:58.

Oct 19 2018

list of dumpers in Model
9f1e5f8c78d4
·frerot on Oct 19 2018, 15:15.
added interface for field access directly from model
4c61bcf26659
·frerot on Oct 19 2018, 14:30.
adding numpy dumper
cf8f370013db
·frerot on Oct 19 2018, 11:57.
fixed package copying
877325144b56
·frerot on Oct 19 2018, 11:46.
added random phase generator
e43a3ff3c1fe
·frerot on Oct 19 2018, 11:29.
changed python module hierarchy and build recipe
1747e6afa6ac
·frerot on Oct 19 2018, 11:28.

Oct 15 2018

added std::vector to possible argument for solve
f0619f7851b3
·frerot on Oct 15 2018, 14:09.

Oct 5 2018

computation of stresses in stress array
3780d406d85e
·frerot on Oct 5 2018, 12:39.

Oct 4 2018

added working plasticity example
5de1d5815970
·frerot on Oct 4 2018, 16:25.
added dumpers and nonlinear solvers implemented in python
f05231f61011
·frerot on Oct 4 2018, 16:12.

Sep 26 2018

cleaning up SConscripts
cdc295bb0abc
·frerot on Sep 26 2018, 12:18.

Sep 24 2018

extra warnings
6d2482be935f
·frerot on Sep 24 2018, 15:54.

Sep 10 2018

added tangent for newton-raphson
eb0ce5c8c0fb
·frerot on Sep 10 2018, 13:03.

Sep 3 2018

added tolerance to EPIC solver
b77216c180fc
·frerot on Sep 3 2018, 17:55.

Aug 23 2018

correct LEGACY_BEM define
02f13cff89c6
·frerot on Aug 23 2018, 09:14.

Aug 22 2018

typo
c3690592204b
·frerot on Aug 22 2018, 17:22.
Merge branch 'features/plasticity'
fd978d29c28d
·frerot on Aug 22 2018, 17:18.
Merge branch 'features/plasticity' of lsmspc3.epfl.ch:Documents/tamaas into…
5ee43d76ed72
·frerot on Aug 22 2018, 17:17.
do not compile legacy bem with intel compiler
f626cea9afdc
·frerot on Aug 22 2018, 17:17.
Merge branch 'features/plasticity'
09c22dd39600
·frerot on Aug 22 2018, 11:20.

Aug 21 2018

solved non-zero traction when inclusion at surface bug
458356c3b7e2
·frerot on Aug 21 2018, 15:15.

Aug 16 2018

more modularity in pybind11 files
715430a6b313
·frerot on Aug 16 2018, 14:43.

Jul 23 2018

better python wrap of applyElasticity
b07178f4b5d4
·frerot on Jul 23 2018, 12:04.

Jul 20 2018

added elasticity test and possibility of using int. operators in python
d297e4ce8a94
·frerot on Jul 20 2018, 13:56.
added setup.py
c1dacaa1236b
·frerot on Jul 20 2018, 12:21.
raising exception on import error
e24c0b36530c
·frerot on Jul 20 2018, 11:57.

Jul 13 2018

implemented "correct" EPIC
04bc2b70bc8e
·frerot on Jul 13 2018, 16:09.

Jul 11 2018

python extension for EPSolver
41b01f96e5a7
·frerot on Jul 11 2018, 14:57.

Jul 10 2018

added dump possibility to model
b4245bcc71f3
·frerot on Jul 10 2018, 15:58.
tentative implementation of EPIC solver
0b4ad5c6c8b9
·frerot on Jul 10 2018, 15:41.

Jul 9 2018

wrapping residual
77af54d36450
·frerot on Jul 9 2018, 17:37.

Jul 2 2018

Polonsky can act on views of model fields
e4452faac64f
·frerot on Jul 2 2018, 19:16.

Jun 27 2018

Implemented Tresca friction for PK tangential solver
297e544e0fc9
·phamba on Jun 27 2018, 13:43.

Jun 1 2018

added functions for plasticity in python
dc0038dad392
·frerot on Jun 1 2018, 16:02.

May 31 2018

implemented Boussinesq volume operator
838b4d345cb1
·frerot on May 31 2018, 11:41.

May 30 2018

implemented linear isotropic hardening
96bf0cc68b29
·frerot on May 30 2018, 17:08.

May 28 2018

implemented (and validated!) mindlin gradient
6f25c48792a6
·frerot on May 28 2018, 17:31.

May 22 2018

added mindlin class
eb632776f781
·frerot on May 22 2018, 14:09.

May 2 2018

prepared code for Kelvin order 4
163d19433861
·frerot on May 2 2018, 16:51.

May 1 2018

wrote kelvin order 3
04a90ab9ed5d
·frerot on May 1 2018, 20:18.

Apr 26 2018

Created regularized solver for Kato (not yet working)
6d603f129482
·phamba on Apr 26 2018, 12:48.

Apr 25 2018

Created Polonsky-Keer tangential solver files
5ea2918b2e73
·phamba on Apr 25 2018, 11:39.

Apr 24 2018

better import error message
795825fc5b1c
·frerot on Apr 24 2018, 14:24.
changed integral operator kind + kelvin as integral operator
d1c5d0562f83
·frerot on Apr 24 2018, 14:04.

Apr 13 2018

added parameters for solve functions
5695d3c20490
·phamba on Apr 13 2018, 14:48.

Apr 12 2018

created Condat solver files
a28f371099a3
·phamba on Apr 12 2018, 10:08.

Apr 11 2018

created Beck-Teboulle solver files
7448bf9d6ca1
·phamba on Apr 11 2018, 14:29.
rewrite loops with Loop::stridedLoop
a4b5610024b0
·phamba on Apr 11 2018, 11:29.

Apr 10 2018

implemented tangential kato solver
a909c00bc1c8
·frerot / phamba on Apr 10 2018, 10:22.
Added method to compute mean of GridBase per component
2620a4eb7981
·phamba on Apr 10 2018, 10:22.
Tests
561cbfbcee77
·phamba on Apr 10 2018, 10:22.
Updated python wrapper
e70a86fc89cc
·phamba on Apr 10 2018, 10:22.

Apr 3 2018

testing Kelvin volume force potential
0d4a6a6379a1
·frerot on Apr 3 2018, 17:58.
implemented print for models
e8a5ca404b06
·frerot on Apr 3 2018, 17:57.
added test_features submodule to python interface
8b2839952a16
·frerot on Apr 3 2018, 14:09.

Mar 25 2018

factorized some code in solvers
f3fccdcfc1d3
·frerot on Mar 25 2018, 16:49.
made tamaas info available in python
b9d7bd23002c
·frerot on Mar 25 2018, 16:48.

Mar 24 2018

correct handling of hermitian grid by pybind
2e3b93674788
·frerot on Mar 24 2018, 10:37.

Mar 23 2018

fixed build bug of link of _tamaas.so happening too early
97cbaba6111f
·frerot on Mar 23 2018, 18:14.

Mar 22 2018

added possibility to extend filter class in python
fb6384b7bf0f
·frerot on Mar 22 2018, 09:55.

Mar 21 2018

rewrote GridView for contiguous data + test of wavevectors generation
b1d76079b6e0
·frerot on Mar 21 2018, 16:15.

Mar 20 2018

wrapping missing methods in core (Statistics)
8bfd968b3faa
·frerot on Mar 20 2018, 15:50.

Mar 14 2018

proper detection of pybind11 and GTest
4eec140f3be0
·frerot on Mar 14 2018, 14:15.

Mar 13 2018

made it possible to inherit Functional class in python
d39acbc1cd9e
·frerot on Mar 13 2018, 14:45.

Mar 8 2018

fixed memory errors + restored compatibility
cd034e49e5c8
·frerot on Mar 8 2018, 18:58.
wrapping adhesion functionals
24c86549be3e
·frerot on Mar 8 2018, 16:00.

Mar 7 2018

removed swig (swig is DEAD! let us sing on its corpse!)
9653f874d0f6
·frerot on Mar 7 2018, 17:48.
wrapping old BEM and added some comments
511f8f3f957d
·frerot on Mar 7 2018, 17:44.
potential fix to a conversion problem with GridHermitian
af94be1267cc
·frerot on Mar 7 2018, 16:53.
wrapped most of modern Tamaas
5ad7e31c1c5e
·frerot on Mar 7 2018, 16:22.
added type casters for pybind11
4ef018c79b67
·frerot on Mar 7 2018, 14:09.